Dpar012350.1
Basic Information
- Insect
- Drosophila parthenogenetica
- Gene Symbol
- grn
- Assembly
- GCA_035047505.1
- Location
- JAWNPM010000182.1:6750248-6783993[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-19 8.2e-16 57.5 4.7 1 35 549 582 549 583 0.98 2 2 1.6e-18 2.8e-15 55.7 6.3 1 35 609 642 609 643 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACCTCAACAGCGGAGGCTGCCGCTCGCAGCTGGTACGACAGTCCGCGTTTAGGCggaggaggcggtggtggtgggGGTTCTGCTGGTGGCGGTGGATCACCGCAAACAAATGGCCTTGGCAGTGCCGGGAGTAGTCTGGCCCACAGCCATCACAGCCTGTCCAGTGGCGCCTCATCGGCGGGCAGTAGTATTGGTGCCGCCCTCGGGGGCGGTGGGAGTGGCGCTGGCGCCGGACTTGGTCTGGATACCAGTGATATGAGTGCGTTCTATGCGCTCGAAAGCAATGGACACCATCGACGCTACTATCCCAGTTATCATCAGCACACAAACGTCTGCGTTGTCGCCTCACTGGCTGCCTGGCTACTTGGCTGCTTGGCTACTTTGCATGCCAGTGCCAAAGGTGCCGCCAATTCCAGCACCAACTCCATTGTCCAGCTGCGGCAGCAACACATCCACAGgcacacatCCCGCATGCCCTCCtcacatgccacgccccaagtGTGCCGGCCGCACTTTCATACGCCGCTGAGTCCCTGGCTGACCAGCGAACACAAATCGTTTGCACCCGCCAGCGCCTGGGGCATGGGACAATTCGCTTGCCCCCAGGAACCGCAGGTGGAGCACAAATTGGGGCAAGTGGGCCAAAGCCATCAGACGACGGCGTCCGGCCAACATTCGTTTCCATTCCCACCGACACCGCCAAAGGACTCCACGCCCGACTCAGTACAAACCGGTCCATCCGAGTACCAGGCCGTGATGAACGCTTTTATGCATCAGCAAGCCACGGGCTCTACCTCATTGACGGATGCCAGCTGTGCGCTGGACATTAAGCCGGCCATACAGAATGGTGGTGCTGCCTCGGCTCACACTGTCAGTACTGGACCAACACAGTCATCGGCGCCCAAGCAGCGTGAAGGTAGtactaacaacagcaacaatacaaATAGCtcaaatagcagcagcagtagcagcagcggcggcggtggcAATCAAGCAccgtcgcagcagcagcagcaacatcagcagcaacaacagcagcaacagcagcagcaacaacagaataacaacaacagcaatgcctCCTCATCCGCCTCCGCCTCTGCCTCCGCCTCCGTCTCAGCGTCTACGTCGAACGGCCTCTTCGATGGTACCGCTCAAGCGCATTATGCGGCCAACAATGCGAACAGCTACGACAGCAGCTATGCCTCGTATCATCATGCGGCAGCGCAGCATCAGGCGGCTGTGGCAGCTGCCAACATGTTCCAAAGTTCCTCCGTGGCAGCGGCTGCAGTGCGGCATAGTATgggcgcagcagcagcggcggcagcgcatcatcatcatcatcacagtcacagccatagtcacagtcacagtcatcATCATGGTGCGTCCGCTTCAGTTGGTTCCGGTTCTGGTTCTGGCTCCGGTACCGGTTCCGGAGCGGGACTGCATGTGGGTGGCTCTGGCATGAGTGGCATGGGCAGTGGCATGAGCACAGGTGCGCACAGCAGTTCAAGTGGCGCTGGAGGTGGCGGTGCAGGTCTAGGCGGCGGTGGCGGAGGAGTTGGCATTGGCGGTGGTCTCGATGTGAAGCCCGTGCGCACAAAGCCCAGGACAAGTGCTGAGGGTCGCGAATGCGTGAATTGTGGTGCAACTTCAACGCCGCTGTGGCGACGCGATGGCACTGGACATTATTTGTGCAACGCCTGTGGCCTCTACTACAAAATGAACGGACAGAATCGACCACTGATCAAGCCAAAGCGAAGACTGacaCTACAGTCGCTGCAGAGTGCGGCCAAGAGGGCGGGGACATCCTGCGCCAATTGCAAGACCACAACCACAACCCTTTGGCGACGCAATGCCAGCGGTGAGCCCGTTTGCAATGCCTGCGGATTATACTACAAGCTGCACAATGTCAATCGTCCACTCACCATGAAGAAGGAAGGCATTCAAACCCGTAACCGCAAGCTCAGCTCCAAGTCGAAGAAGAAAAAGGGTTTGGGCGGCGGTTGTCTGCCAATTGGCGGACATTTGGGCATGGGCGACTTTAAGCCACTGGATCCATCCAAGGGCTTTGGCGGCGGCTTCTCCGCATCCATGGCGCAACATGGACATCTTTCCAGTGGTCTGCATCCGGCACATGCGCATATGCACGGCAGCTGGTATACTGGTGGCATGGGTGCTCTGGGTGCCTCCGGTGGACTACAGGGTGGCTTCTCCACGGCGGGCTCTCTGGGTGGTGGTGTAGTACCCCACTCACAGCCCTATCACTTGGGTCTCAGCTCAATGCCACTGAACAttgcccacaatcagcaattGGTTCATCCGCTGGGATGCAGCTTCCATCCAAGGATCAAGGACTCACCTCCAGAGCACTCGCtaggagagtga
- Protein Sequence
- MDMTSTAEAAARSWYDSPRLGGGGGGGGGSAGGGGSPQTNGLGSAGSSLAHSHHSLSSGASSAGSSIGAALGGGGSGAGAGLGLDTSDMSAFYALESNGHHRRYYPSYHQHTNVCVVASLAAWLLGCLATLHASAKGAANSSTNSIVQLRQQHIHRHTSRMPSSHATPQVCRPHFHTPLSPWLTSEHKSFAPASAWGMGQFACPQEPQVEHKLGQVGQSHQTTASGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLTDASCALDIKPAIQNGGAASAHTVSTGPTQSSAPKQREGSTNNSNNTNSSNSSSSSSSGGGGNQAPSQQQQQHQQQQQQQQQQQQQNNNNSNASSSASASASASVSASTSNGLFDGTAQAHYAANNANSYDSSYASYHHAAAQHQAAVAAANMFQSSSVAAAAVRHSMGAAAAAAAHHHHHHSHSHSHSHSHHHGASASVGSGSGSGSGTGSGAGLHVGGSGMSGMGSGMSTGAHSSSSGAGGGGAGLGGGGGGVGIGGGLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASGGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMPLNIAHNQQLVHPLGCSFHPRIKDSPPEHSLGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00472713; iTF_00554058; iTF_00562838; iTF_00538620; iTF_00518817; iTF_00499957; iTF_00596313; iTF_00528450; iTF_00497034; iTF_00597806; iTF_00482642; iTF_00563554; iTF_01326051; iTF_00491172; iTF_00559876; iTF_00593508; iTF_01326820; iTF_01328260; iTF_00509477; iTF_00617285; iTF_01325317; iTF_00804038; iTF_00901895; iTF_00497800; iTF_00598539; iTF_00601419; iTF_00567916; iTF_00554734; iTF_01320846; iTF_01570606; iTF_00513839; iTF_00531344; iTF_00540752; iTF_00547024; iTF_00473442; iTF_00611056; iTF_00521809; iTF_00567193; iTF_00576722; iTF_00487667; iTF_00506515; iTF_00577427; iTF_00552692; iTF_00496245; iTF_00515254; iTF_00526967; iTF_00589911; iTF_00620247; iTF_00607475; iTF_00493304; iTF_00518104; iTF_00472026; iTF_00474174; iTF_00481216; iTF_00502906; iTF_01322298; iTF_00479835; iTF_00610299; iTF_00805627; iTF_00498525; iTF_00616566; iTF_00549209; iTF_00542813; iTF_00574461; iTF_00494046; iTF_00532766; iTF_00520287; iTF_00575231; iTF_00581184; iTF_01320128; iTF_01321568;
- 90% Identity
- -
- 80% Identity
- -