Dalg004008.1
Basic Information
- Insect
- Drosophila algonquin
- Gene Symbol
- grn
- Assembly
- GCA_035041765.1
- Location
- JAWNKY010000739.1:181126-201749[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-19 5.7e-16 58.0 4.7 1 35 361 394 361 395 0.98 2 2 8.9e-19 2e-15 56.2 6.3 1 35 421 454 421 455 0.97
Sequence Information
- Coding Sequence
- ATGCCCTCCACACATGCCACGCCCCAAGTGTGCCGTCCGCACTTCCACACACCGCTGAGTCCCTGGCTGACCAGCGAACACAAGTCGTTCGCCCCCGCCAGCGCCTGGAGCATGGGACAGTTCGCCTGCCCCCAGGAGCCGCAGGTGGAGCACAAGCTGGGCCAGATGGGCCAGAGCCACCAGACGACGGCCGCCGGCCAGCACTCGTTTCCATTCCCACCGACACCGCCAAAGGATTCGACGCCCGACTCAGTACAAACCGGTCCATCCGAGTACCAGGCCGTTATGAACGCCTTCATGCACCAACAGGCCACGGGCTCTACCTCACTGACGGACGCCAGCTGTGCGCTGGACATCAAGCCCTCCATCCAGAATGGCAGCGCCAGCTCGAGCGGACCCGCCCCCACATCAGCGCCCAAGCAGCGCGAAGGTACtaacagcaataacaatagctccaactccagcagcagccagcagcagcagcagcaacagcagcagcagcagcagagcggcagcagcaatcccaacaacagcaatgcctcctcctccgcctccgcatCAGCCTCCGCGGCCACCTCCTCGAACGGCCTGTTCGACGGCACCGCGCAGGCGCACTACGCGGCCTCCAACAATGCCAGCGGCAGCGCgaacggcggcagcggcggggGCAGCTACGACAGCAGCAGTTACGCGTCGTACCACCACGCTGCACAGGCGGCACACCACCAggcggcggctgtggcagcggccAACATGTTCCAAAGTTCCTCCGTGGCGGCGGCCGCCGTGCGGCATAGTATGggtgcagcggcggcggcagcggcgcaccaccatcaccaccaccacagcggACACCATCATCACTCCTCCGCCTCGTCAGCGGCCAGTGCGGCCATGCACGGCATGGGCAGCAGcatgggcggcggcggcatggGGGGTGGCAGTGGAGCGGGCGGTAGCTCGGGATCCCTGGGCGGACACAGTGGGTccggggtgggtggtggcggtggtggcgttGGCGGAGGACTGGATGTGAAGCCGGTGCGGACGAAGCCGAGGACGAGTGCTGaGGGTCGCGAGTGCGTGAACTGTGGCGCCACATCGACGCCGCTGTGGCGACGCGACGGAACGGGACACTATCTATGCAATGCCTGTGGCCTATACTACAAGATGAACGGCCAGAACCGACCCCTGATCAAGCCAAAGCGAAGACTGACCCTCCAGTCGCTGCAGAGTGCGGCCAAGCGGGCGGGTACATCCTGCGCCAATTGCAagaccacaaccacaaccctTTGGCGGCGCAACGCCAGCGGCGAGCCCGTCTGCAACGCCTGCGGATTGTACTACAAGCTGCACAATGTCAATCGTCCGCTCACCATGAAGAAGGAGGGCATACAGACGCGTAACCGCAAGCTGAGCTCCAAgtccaagaagaagaagggccTGGGCGGCGGCTGCTTGCCGATGGGCGGACATCTGGGCATGGGAGATTTCAAGCCACTGGACCCCTCGAAGGGCTTCGGCGGCGGCTTCTCTGCCTCCATGGcgCAACATGGACACCTTTCGAGTGGATTGCATCCGGCGCATGCGCATATGCATGGCAGCTGGTATACCGGCGGCATGGGTGCTTTGGGGGCTTCTAGTGGGCTGCAGGGAGGCTTCTCCACCGCTGGTTCTCTGGGCGGCGGTGTTGTGCCGCACTCGCAGCCCTATCACTTGGGACTCAGCTCAATGGGCACCTGGCGCACAGACTATACGTGA
- Protein Sequence
- MPSTHATPQVCRPHFHTPLSPWLTSEHKSFAPASAWSMGQFACPQEPQVEHKLGQMGQSHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLTDASCALDIKPSIQNGSASSSGPAPTSAPKQREGTNSNNNSSNSSSSQQQQQQQQQQQQSGSSNPNNSNASSSASASASAATSSNGLFDGTAQAHYAASNNASGSANGGSGGGSYDSSSYASYHHAAQAAHHQAAAVAAANMFQSSSVAAAAVRHSMGAAAAAAAHHHHHHHSGHHHHSSASSAASAAMHGMGSSMGGGGMGGGSGAGGSSGSLGGHSGSGVGGGGGGVGGGLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPMGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASSGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00569367;
- 90% Identity
- iTF_00472026;
- 80% Identity
- iTF_00472026;