Dniv005294.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila niveifrons
Gene Symbol
grn
Assembly
GCA_035046325.1
Location
JAWNOC010000046.1:15709552-15750173[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.3e-19 6.6e-16 57.5 4.7 1 35 508 541 508 542 0.98
2 2 1.5e-18 2.3e-15 55.8 6.3 1 35 568 601 568 602 0.97

Sequence Information

Coding Sequence
ATGGATATGACCTCAACAGCGGAGGCTGCCGCTCGCAGCTGGTACGACAGTCCGCGCTTAGGCGGCggtggaggcggcggcggtgttggcggcggtggcggatCACCGCAAAACAATGGACTGGGCAGCGCTGGCAGTAGCCTGGCCCACAGCCATCACAGCCTGTCCAGCGGCGCCTCATCGGCGGGCAGCAGCGTTGGTGCCGCCCTCGGTGGCGGCGCTGGTGGCGCTGGCGCCGGCCTTGGTCTGGATACCAGCGATATGAGCGCCTTCTATGCGCTGGAAAGCAATGGACATCATCGACGCTACTATCCCAGCTATCATCAGCACACATCCCGCATGCCCTCCTCACATGCCACGCCCCAAGTGTGCCGGCCGCACTTTCATACGCCGCTCAGTCCATGGCTGACCAGCGAACACAAACCGTTTGCACCCGCCAGCGCCTGGGGCATGGGTCAATTCGCCTGCCCCCAGGAGCCGCAGGTGGAGCACAAGCTGGGCCAAGTGGGCCAGAGCCATCAGACGACGACGGCGTCCGGCCAGCATTCGTTTCCATTCCCACCAACACCGCCAAAGGACTCCACGCCCGACTCAGTACAAACCGGTCCATCCGAGTACCAGGCCGTGATGAACGCTTTCATGCACCAACAGGCCACGGGCTCTACCTCACTGACGGACACCAGCTGTGCGCTGGACATCAAGCCATCCATACAGAATGGCGGCTCATCTGCGGCACATGGCAGCAACGCTGGACTAGCGCAATCCTCGGCGCCCAAACAGCGTGAAGGTAgtactaacaacaacaacaacagcaatacaaATAGCtcaaatagcagcagcagcagcagcggcggcggcggcaatcaagcgccgcagcagcaacagcagcagcagcagcaacaacaacagcagcaacagcagcagagtaacaacaacagcagtaacagcaacaccaacagcaacaccaatagcaacaccaacagcaacagcaacaataacaacagcaatgcctCCTCATCCGCCTCCGCGTCAGCATCGAATGGTCTATTCTATGGCACAGCTCAGGCGCATTATGCGGCAACCAACAGCAAtgcgaacagcagcagctacgacAGCAGCTATGCCTCGTATCATCATGCGGCAGCGCAACATCAGGCGGCTGTGGCCGCCGCCAATATGTTCCAAAGTTCCTCGGTGGCAGCGGCCGCTGTCCGGCATAGCATGggcgcagctgcagcggcggcggcgcatcaacatcatcatcacagtcacagtcataGTCACAGTCATCATGGCTCGAACGCAGGTTCTGGGCTTCATGGTGGCAATGgcagcggtggcggtggtgttGGTGGCGTCATGAGCGGCATGGGCAGCGGCATGAGCAGCGGTGCACACAGCAGCTCGAGTGGcggaggcggcggtggcggtggcattGGCGGtggtgctggtggtggtgTTGATGTGCTCGATGTGAAGCCCGTGCGCACAAAGCCCAGGACAAGTGCTGAGGGACGCGAGTGCGTGAATTGCGGTGCCACATCGACACCGCTGTGGCGACGCGATGGTACTGGACATTATTTGTGCAACGCCTGTGGCCTCTACTACAAAATGAATGGTCAGAATCGGCCACTGATCAAGCCAAAGCGAAGACTGACGCTCCAGTCGCTGCAGAGCGCGGCCAAGCGGGCGGGCACATCCTGCGCCAATTGCAagaccacaaccacaaccctTTGGCGACGCAACGCCAGCGGCGAGCCCGTGTGCAATGCCTGCGGATTATACTACAAGCTGCACAATgTCAATCGTCCACTTACCATGAAAAAGGAGGGCATACAGACGCGTAATCGCAAACTCAGCTCCAAGTCGAAGAAGAAAAAGGGCTTGGGCGGCGGCTGTCTGCCAATTGGCGGCCATCTAGGCATGGGCGACTTTAAGCCACTCGATCCATCGAAGGGCTTCGGCGGCGGCTTCTCTGCATCCATGGCGCAACATGGACACCTTTCCAGTGGTCTGCATCCGGCACATGCGCATATGCATGGCAGCTGGTATACTGGTGGCATGGGCGCATTGGGCGCCTCCGGTGGACTGCAGGGTGGCTTCTCCACGGCGGGTTCGCTTGGTGGTGGCGTTGTGCCCCACTCGCAGCCCTATCACTTGGGCCTCAGCTCGATGTTACGGACCGTGGACAACATTAACCTGTTAACCCAAACTGACGGCGACCAGGTCCccaagcaacagcatcagcatcagcaacaccaacagcagcggcgACTGGTGTCGCCTACTTTTGGGACCAGAGCCTGA
Protein Sequence
MDMTSTAEAAARSWYDSPRLGGGGGGGGVGGGGGSPQNNGLGSAGSSLAHSHHSLSSGASSAGSSVGAALGGGAGGAGAGLGLDTSDMSAFYALESNGHHRRYYPSYHQHTSRMPSSHATPQVCRPHFHTPLSPWLTSEHKPFAPASAWGMGQFACPQEPQVEHKLGQVGQSHQTTTASGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLTDTSCALDIKPSIQNGGSSAAHGSNAGLAQSSAPKQREGSTNNNNNSNTNSSNSSSSSSGGGGNQAPQQQQQQQQQQQQQQQQQSNNNSSNSNTNSNTNSNTNSNSNNNNSNASSSASASASNGLFYGTAQAHYAATNSNANSSSYDSSYASYHHAAAQHQAAVAAANMFQSSSVAAAAVRHSMGAAAAAAAHQHHHHSHSHSHSHHGSNAGSGLHGGNGSGGGGVGGVMSGMGSGMSSGAHSSSSGGGGGGGGIGGGAGGGVDVLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASGGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMLRTVDNINLLTQTDGDQVPKQQHQHQQHQQQRRLVSPTFGTRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00569367;
90% Identity
iTF_00472713; iTF_00554058; iTF_00509477; iTF_00589911;
80% Identity
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