Daff018009.1
Basic Information
- Insect
- Drosophila affinis
- Gene Symbol
- grn
- Assembly
- GCA_037356375.1
- Location
- JAZHFB010000003.1:27125466-27158979[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-19 7.8e-16 57.7 4.7 1 35 474 507 474 508 0.98 2 2 1.1e-18 2.7e-15 56.0 6.3 1 35 534 567 534 568 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACCTCAACAGCGGAGGCTGCCGCGCGCAGCTGGTACGACAGTCCGCGCttaggcggcggcggctctgGATCTGGCAGCAACGGCGGCGGCGTCTCCCCACACACCAACGGCCTGGGCAGCGCCGGCAGCAGCCTGGCCCACAGCCACCACAGCCTGTCCAGCGGCGCCTCCTCGGCGGGCAGCAGCGTAGGAGCAGCCCTCGGCGGCGGAGCGGGCGGTGCCGGCTCCGGCCTCGGCCTGGATACCAGCGACATGAGTGCGTTCTATGCGCTCGAGAGCAACGGACACCATCGGCGGTACTATCCGAGCTATCATCAACACACATCCCGCATGCCCTCCACACATGCCACGCCCCAAGTGTGCCGTCCGCACTTCCACACACCGCTGAGTCCCTGGCTGACCAGCGAACACAAGTCGTTCGCCCCCGCCAGCGCCTGGAGCATGGGACAGTTCGCCTGCCCCCAGGAGCCGCAGGTGGAGCACAAGCTGGGCCAGATGGGCCAGAGCCACCAGACGACGGCCGCCGGCCAGCACTCGTTTCCATTCCCACCGACACCGCCAAAGGATTCGACGCCCGACTCAGTACAAACCGGTCCATCCGAGTACCAGGCCGTTATGAACGCCTTCATGCACCAACAGGCCACGGGCTCTACCTCACTGACGGACGCCAGCTGTGCGCTGGACATCAAGCCCTCCATCCAGAATGGCAGCGCCAGCTCGAGCGGACCCGCCCCCACATCAGCGCCCAAGCAGCGCGAAGGTACtaacagcaataacaatagctccaactccagcagcagccagcagcagcagcagcaacagcagcagcagcagcagagcggcagcagcaatcccaacaacagcaatgcctcctcctccgcctccgcatCAGCCTCCGCGGCCACCTCCTCGAACGGCCTGTTCGACGGCACCGCGCAGGCGCACTACGCGGCCTCCAACAACGCCAGCGGCAGCGCGaacggcggcagcggcgggggCAGCTACGACAGCAGCAGTTACGCGTCGTACCACCACGCTGCACAGGCGGCACACCACCAGGCggcggctgtggcagcggcCAACATGTTCCAAAGTTCCTCCGTGGCGGCGGCCGCCGTGCGGCATAGTATGGgtgcagcggcggcggcagcggcgcaccaccatcaccaccaccacagcgGACACCACCATCACTCCTCCGCCTCGTCAGCGGCCAGTGCGGCCATGCACGGCATGGGCAGCAGcatgggcggcggcggcatggGGGGCGGCAGTGGAGCGGGCGGTAGCTCGGGATCCCTGGGCGGACACAGCGGGtccggggtgggtggtggcggtggtggcgttGGCGGAGGACTGGATGTGAAGCCGGTGCGGACGAAGCCGAGGACGAGTGCTGAGGGTCGCGAGTGCGTGAACTGTGGCGCCACATCGACGCCGCTGTGGCGACGCGACGGAACGGGACACTATCTATGCAATGCCTGTGGCCTCTACTACAAGATGAACGGCCAGAACCGACCCCTGATCAAGCCAAAGCGAAGACTGACCCTCCAGTCGCTGCAGAGTGCGGCCAAGCGGGCGGGTACATCCTGCGCCAATTGCAagaccacaaccacaaccctTTGGCGGCGCAACGCCAGCGGCGAGCCCGTCTGCAACGCCTGCGGATTGTACTACAAGCTGCACAATGTCAATCGTCCGCTCACCATGAAGAAGGAGGGCATACAGACGCGTAACCGCAAGCTGAGCTCCAAgtccaagaagaagaagggcCTGGGCGGCGGCTGCTTGCCGATGGGCGGACATCTGGGCATGGGAGATTTCAAGCCACTGGACCCCTCGAAGGGCTTCGGCGGCGGCTTCTCTGCCTCCATGGcgCAACATGGACACCTTTCGAGTGGATTACATCCGGCGCATGCGCATATGCATGGCAGCTGGTATACCGGCGGCATGGGCGCTTTGGGGGCTTCTAGTGGGCTGCAGGGAGGCTTCTCCACCGCCGGTTCTCTGGGCGGCGGTGTTGTGCCGCACTCGCAGCCCTATCACTTGGGACTCAGCTCAATGGGCACCTGGCGCACAGACTATACGTGA
- Protein Sequence
- MDMTSTAEAAARSWYDSPRLGGGGSGSGSNGGGVSPHTNGLGSAGSSLAHSHHSLSSGASSAGSSVGAALGGGAGGAGSGLGLDTSDMSAFYALESNGHHRRYYPSYHQHTSRMPSTHATPQVCRPHFHTPLSPWLTSEHKSFAPASAWSMGQFACPQEPQVEHKLGQMGQSHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLTDASCALDIKPSIQNGSASSSGPAPTSAPKQREGTNSNNNSSNSSSSQQQQQQQQQQQQSGSSNPNNSNASSSASASASAATSSNGLFDGTAQAHYAASNNASGSANGGSGGGSYDSSSYASYHHAAQAAHHQAAAVAAANMFQSSSVAAAAVRHSMGAAAAAAAHHHHHHHSGHHHHSSASSAASAAMHGMGSSMGGGGMGGGSGAGGSSGSLGGHSGSGVGGGGGGVGGGLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPMGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASSGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00569367;
- 90% Identity
- iTF_00474174; iTF_00481216; iTF_00601419; iTF_00515254; iTF_00564311; iTF_00487667; iTF_00603736; iTF_00575231; iTF_00474880; iTF_00581184; iTF_00518104;
- 80% Identity
- iTF_00474174; iTF_00481216;