Basic Information

Gene Symbol
Camta1
Assembly
GCA_035046325.1
Location
JAWNOC010000052.1:29728838-29755170[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2 1.7e+04 -6.6 5.6 24 59 150 184 127 230 0.50
2 3 1.1e-48 9.7e-45 151.0 2.2 2 116 289 401 288 401 0.98
3 3 0.26 2.2e+03 -1.7 4.9 5 89 540 628 536 681 0.68

Sequence Information

Coding Sequence
ATGGCCGGCTATCGTGCCCTGCCCCTGGCACCCGTCTCGGCCAGCAGCATGGCAACAACGGCTGCGGTGCAACCAAGTGGTGGACATCCGGGCCCAACGATGGCGTAtgcgcatcatcatcatcagtcgATGACGGCGATGTCGAATAACGGTATTATCTATCAGTCGGCGGTGCACGCCTCCATACACAGTTTGAATACAGTACAAAGCCAGCATCGCTCATCCACCGCCACGCATCATCATATTCTAGCAACGGCAACCGCTACGGCGGCAGCAACGGtgacagccacagcagcagcagcagcggccacagcggcagcagcggtggcCGTGGCGTTGCCcacgccagcagcaacagctggcGCACTGCAGCCGACGGCAACTGCAGCCAGTTATGGTCAGCAGCAACacatgcagcaacagcagcagcaacaacagcagcaacagttgcagctgcagccaacgcatcatcagcaacaacagcaacagcagcaattgatGCTGCATCAGCAACactcacagcagcaacagcagcaacatcagcatcaacagcaactgctgccacatcaacaacaacagcagcagcagcaacatcacctgcagcaacaccaacagcaacaacagcagcagcaacacttgaCGCCTGCGTTGCATcatcaccaccatcatcatcaccaccaccagcagctGTCGCTGCATCAGAACCACCTGTACTTCAATGGCCTGggccatcaccatcatcatcatcatcggcagATCTTTAGCCATCTGCAGAGCGCATTGTTGCCGCTCAGTGTTAATGGCGAACCTATCAAACTGCCCGACAATTTGGAGAGCCTGCCAAGAGCCGACAGTTTTCCATCGCAGCGCCATCGTTGGAATACAAATGAGGAAATCGCAGCGATTCTTATCAGCTTTGATAAGCACAGCGAATGGCAATCAAAAGAAGTCAAAACAAGACCGAAGAGCGGCTCCCTGCTGCTCTACTCGAGAAAGAAGGTGCGCTACAGACGCGATGGCTACTGCTGGAAGAAGCGCAAGGATGGCAAGACGACACGTGAGGATCACATGAAACTGAAAGTACAAGGCACTGAGTGCATCTATGGTTGTTATGTACACTCGGCCATATTGCCCACATTTCATCGCAGATGTTACTGGCTTTTACAGAATCCGGACATTGTTTTGGTACACTATCTGAATGTGCCGTATCCGGATGATAATAAAATGGCCGTGATTGCGCCAAGCATAACGCTCTGGGGCGACAAAAAGGAGTGGACCAAGGAGGAGCTGGTCAGCCAGCTAAAACCCATGTTGTCCACAGTGAATTCGGATGAGGACTCTGACTCGGGCAACGATATAGAAATATCGACCGCTGAGACTGTGGAGTCTATTGTATGCCAGTTGATGGAGAAGCAGCGCCTGTCGCGTCAGGCAGCTCTTGTCAAGCAACTGGACTGCGGTTGTGGTGATGCAGCCTGTGCCGATGGCAAGACCTGCACGCATCCCGTCATGCGTCGCACGGGCATCGTCAAATCGGTGTCTGAAAAGCGACCCAGCGATGGTTACAGCGCTGCCAATGGCACGCCTAATGTCGTTGTGGCCAGCAAGCTTTATTCGCGCTGGTCTGAACGGCATCGGCAGCGAGAGGCGGCGTTGCATATGGAGAATTCGCACGCGCAGTTCCACAATGCCACGCAGCAGTTGCCGCAGGAGTCGGCGATCAAATTCCAAATCAttccgcaacagcagcagcagcagcaacaacagggaGACGGCAGCAACTATCAGCAGCAATATCGTGGTGCCAATCAGTTGATGGCCACAAGAAGCAATCTGAtaatacagcagcagcagcaacaacaacaacagcagcagcagcagcaacatcagcaatatcaacagcagcagcaacatttgaaCTTACAACGCTTTGTGGCCAGTCATAATCAGAGCAATCAAAGTCATAATCAGAATagcaataccaacaacaataattcaGCACATTTAAATCATCGCCTGCAAATTGCCAATACaacaatcacagcaacaacacgagaggcggttgcaacagcagcagcaacaataacaacaacaacagcagcagcagcagccgcagcaaccaGCTCAAATGTCATGGATACGGAACTAATTGAAAACCAAAGCCAGCACCTGaccacaaatgcaaataacaataataaaatcagcctcaacaacaataacaattgcaacagcagcagcagtaagcaattaacagcagcaacaacaaatacaacagcagcagcagtggcatcTCAAGCAAACAACGAATTAAATGTCGTAAACAATAAtggacacaacaacaacaacagcagcaataacttTATATACAATCAGCAGCATGCGAACGCTaccagcaatagcagcagcaacaataacaacaaccagcattattataaattgcaacagacaacagcaacaacaactacaacagcagcagcagcagccaccctcagcaacaacaatcaacccCCAGTTGAGGCAATGTGCATGTCACCAGAacatcacagcagcagcgtgggtagcagcatcagcaataacaataacaacaacaacaacagcaatagcaatagcaacagcagcaatagcaatctGTTGAGAGAAACAACGTCTTCCGCTGGCAACACCCCTTCCACGTCGGCAACCACATCCACCTCGAGTTCCTTACAGTCGATTATCGATggcaatcagcagcaacaaattgcaacgacaacagcagcaacaacaacaacaacaggagcaggagcagcagcaacagcagcaaattgtgATAATTTAATGAGCGCCAATGCCTTGGCAGAGCTGGAGTTGGGTGAGCAGGCGGCAAggagctacaacaacaacaacaacaacaacaacagcagcagcagcaacaacagcgtcaACAATCAGGCCACAACGGCCACCATCCATAATGGTTGTGCAAACTACAGTGCTTCCAGTGATAATAGTAGCCAAATTAGTGCCAGCGATGACAGCAGCTACggcgccaacagcaacagcaacaccaacaacaacaacaatcagaataatcaaagcaataacaacgagGAGGAAGCACACACGGAAACGATGAGCTTCTTCAATGAAACGCTGGATCTTTCGCATGAGGACATTCAGCGCACTCTCATCGCCAACATGCCGTACAGcaatgccacagcaacaacagcgacaacaactgcaacatcgacaacaacagcaacatcagcagctaGCATTGAGCTCAATAGCGAAATAATCGATGCAGCTAAGCAACAGCAGACAATCAGCGTGGAGTCGCCACAGGGCGAAGATGAAGACACCGCCGATGTCTTTGCCAACCTGGATGCCTTCGACATGCTAGTGGAGTTCCCCGAACTCGATCTGGATGACAAGCAGGCGCTGAATAACACGGCACTCGAACAGGAGCACAGTCATGGTCACACTTTGAATGCATCGACATCGCACTATCTCGACTCAACGCATTCGCAAACGCAGCGAAAGCTGCTCAACATTTGCGACTTCAGTCCCGAATGGTCGTACACTGAAGGCGGCGTCAAGGTGCTGGTTGCCGGTCCCTGGACCAGTGATGGCGGCTGCTACACGGTGCTCTTTGATGCTCAGCCAGTGCCAACGGTGCTGGTGCAGGAAGGAGTGCTGCGGTGCTATTGTCCTGCCCATGAGGCGGGTCTAGTCACACTTCAAGTGGCCTGCGGTGGTTTTCTCGTCTCCAATTCGGCCATGTTCGAGTACAAGCTGTCGCTGCTGGCCGATGCACCGTTCGATGCCAGCAGCTCCAACGATTGTCTGTACAAGTTTACGCTGCTCAATCGCCTCTCAACCATCGACGAGAAGTTGCAACTGAAAGTGGAGAACGAGCTGGCCACTGATCAGACTGCACTTTATCTGGAGCCCAACTTTGAGGAGAAGCTGGTGGCCTATTGTCATCGTCTGATGAAGCACGCCTGGAACACGCCCAGCACCGTGGCCAGTTGGAGCGTCGGCTTGCGTGGCATGACGCTGCTGCATTTGGCTGCCGCTCTGGGCTATGCCAAGCTGGTGGCTGCCATGCTCAATTGGCGTGCCGAGAATCCACATATCATACTCGAAACCGAGTTGGATGCACTCAGTCAGGATGTGCACGGTTTTACGCCGCTCGCTTGGGCGTGTGTGCGTGGCCACTTGGAGTGCACGCTTCTGCTGTACAAATGGAATCACAATGCGCTGAAGATCAAGACGCAGGCACAGCAAACGCCCCTGGATCTGGCCAGTCTCAAGGGACACAAGCAGCTGTTGTCGCAGCTGTGTCGCCTGGAGAAGGAGCGTTGCCGAAAGCCGCATCCACGCGGTGGCCTGGCCAATCTGTCCATGAACTTGCCCATTGAGTCGCCTAGCGAGGAATCGGGCTACAGTGCTTACGAGCTGGAGCTGCAGCGTCGCCACGATGGCGTCTTTCTGCGACCCATTGCCATGCATAGCAATCAAAGTCCGCCGAACAACAGCAGTCGCTATGCGAAGCGATCCTCCATTGACAGCGGCATCAACATGGACATGCGCAGCAAGTCCGGCAAACCTTTGCCTCGACTGCATGGCAACTTTGACTGCCACGATAACTACGCTTTGGGTGTGGACTCTCCGCTGGAATCGCTGTCAGCGGGCACCAATTGTTCTGGACTTTTGTCGCCGCTGCGTAAAATGGACTTTGCCTTGTGCGAGGTATCCACGGGCGAGTCGAGTCCCATACACGACAAAGACATCATCGATTGCGATGACAATTCGACGAGCGTCACCGATGTTACCATTAACAATGAGCTCAACGATGTAGGGGATTCGGATTCGGCCAAAGTGTTGACGCTGGCTGAGCACATCATTGCCGCTATGCCAGAGCGTATTAAGAACGAGGCGGATGAAATGATGGTCTTGGGCAGTCCTTTAACTGAGCCCCTCACTTCGGAATCATCGGCGCTGACTGACAGCTTCATGGATCCGCTGCTCGATTCACTGCCGAACACGCATTTTGACAGTGATTTCAGCTTTGATTTTCATGATCACAGCTATCGCTATCACGATGTTAGCACACCCTGCTCCAGCCTTAGTCCAGCGAGCTCGGGACCATTGCAATCGCCGGCAAGTTACTCGATACTGGGCACAGATCCGTCAGTCAGCTCACCAAGTCCGCCGCCATCGACCAAGCAGCTAACCGAGTTTCTGCATGCCTCCAGCATTTCGCAGTATCCATTCGAGGCGGACTTCTCCAAGCTAACGCTCACCGATACCGAGCAACGAGAACTCTACGAGGCGGCCAAGTGCATACAGAAAGCGTATCGTTCGTACAAAGGAAGGCAGAACAAGGAGCGCACAGCTGCCATTGTTATACAGAACTATTATCGTCGCTACAAGCAGTATGCCTACTACCGACAGATGACGAATGCTGCTCTGGTTATCCAGCATGGCTATCGCTCGTATCGTCGCAACAAGCGCTTCAAGAAATCCCAGCATACGCCCAGTGGCTTGGGCACTAGCAGCGATCTTGGCAGCGTTAGCAGCAACTCGCAGTGTTTGTCCAGCTTCTACGATCACTACAAGCAGGATCAACAGAGCTCACAGCCCAGCACGCCCAAGGAGACGAGTCCATCTGGTCCCTTGAAgcGCACCTACTCGCAGTCTACGCAAAATCAGGCAGCGCGTAAAATACAACAGTTCATGAGACAATCACGTATCAAActacagagagagcgagccgAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTATCAAGGGCAGCAGGAAATGTCAGTTTGTCATAGTGAAATTGGcaacaacaacggtcTGCTGGATCAGATGCAACCCAATCAATGA
Protein Sequence
MAGYRALPLAPVSASSMATTAAVQPSGGHPGPTMAYAHHHHQSMTAMSNNGIIYQSAVHASIHSLNTVQSQHRSSTATHHHILATATATAAATVTATAAAAAATAAAAVAVALPTPAATAGALQPTATAASYGQQQHMQQQQQQQQQQQLQLQPTHHQQQQQQQQLMLHQQHSQQQQQQHQHQQQLLPHQQQQQQQQHHLQQHQQQQQQQQHLTPALHHHHHHHHHHQQLSLHQNHLYFNGLGHHHHHHHRQIFSHLQSALLPLSVNGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHSEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDEDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDAACADGKTCTHPVMRRTGIVKSVSEKRPSDGYSAANGTPNVVVASKLYSRWSERHRQREAALHMENSHAQFHNATQQLPQESAIKFQIIPQQQQQQQQQGDGSNYQQQYRGANQLMATRSNLIIQQQQQQQQQQQQQQHQQYQQQQQHLNLQRFVASHNQSNQSHNQNSNTNNNNSAHLNHRLQIANTTITATTREAVATAAATITTTTAAAAAAATSSNVMDTELIENQSQHLTTNANNNNKISLNNNNNCNSSSSKQLTAATTNTTAAAVASQANNELNVVNNNGHNNNNSSNNFIYNQQHANATSNSSSNNNNNQHYYKLQQTTATTTTTAAAAATLSNNNQPPVEAMCMSPEHHSSSVGSSISNNNNNNNNSNSNSNSSNSNLLRETTSSAGNTPSTSATTSTSSSLQSIIDGNQQQQIATTTAATTTTTGAGAAATAANCDNLMSANALAELELGEQAARSYNNNNNNNNSSSSNNSVNNQATTATIHNGCANYSASSDNSSQISASDDSSYGANSNSNTNNNNNQNNQSNNNEEEAHTETMSFFNETLDLSHEDIQRTLIANMPYSNATATTATTTATSTTTATSAASIELNSEIIDAAKQQQTISVESPQGEDEDTADVFANLDAFDMLVEFPELDLDDKQALNNTALEQEHSHGHTLNASTSHYLDSTHSQTQRKLLNICDFSPEWSYTEGGVKVLVAGPWTSDGGCYTVLFDAQPVPTVLVQEGVLRCYCPAHEAGLVTLQVACGGFLVSNSAMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDEKLQLKVENELATDQTALYLEPNFEEKLVAYCHRLMKHAWNTPSTVASWSVGLRGMTLLHLAAALGYAKLVAAMLNWRAENPHIILETELDALSQDVHGFTPLAWACVRGHLECTLLLYKWNHNALKIKTQAQQTPLDLASLKGHKQLLSQLCRLEKERCRKPHPRGGLANLSMNLPIESPSEESGYSAYELELQRRHDGVFLRPIAMHSNQSPPNNSSRYAKRSSIDSGINMDMRSKSGKPLPRLHGNFDCHDNYALGVDSPLESLSAGTNCSGLLSPLRKMDFALCEVSTGESSPIHDKDIIDCDDNSTSVTDVTINNELNDVGDSDSAKVLTLAEHIIAAMPERIKNEADEMMVLGSPLTEPLTSESSALTDSFMDPLLDSLPNTHFDSDFSFDFHDHSYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQNKERTAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSQHTPSGLGTSSDLGSVSSNSQCLSSFYDHYKQDQQSSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQRERAEKEKLVHQRRAEYLQNLQYQGQQEMSVCHSEIGNNNGLLDQMQPNQ