Basic Information

Gene Symbol
Camta1
Assembly
GCA_037075305.1
Location
JBAMCE010000553.1:1264152-1291058[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.97 1.8e+04 -4.5 5.0 46 88 157 201 137 233 0.52
2 3 5.6e-49 1e-44 151.0 2.2 2 116 292 404 291 404 0.98
3 3 0.35 6.6e+03 -3.1 1.8 72 73 635 636 571 698 0.61

Sequence Information

Coding Sequence
atGGCCGGTTATCGtgcgctgccgctggcgccCGTCTCGGCcacggcggctgctgcggtgCAGCCGGGCAGCGGCCATCCGGGCCCCACAATGGCGGCATATGCCGCCCATCACCACCAGTCGATGACGGCGATGTCCAATAACGGTATTATCTATCAGTCGGCGGTGCACGCCTCCATACACAGCTTGAATACAGTACAAAGCCAGCATCGCTCATCCACAACGCATCATCATATTCTAGCCACGGCAACGGccacggcgacggcgacggcagcagcagcaacagcagcagcagcagcggcagcagcaaccgctGCAGTGGCCGTTGCGCTGCCAACAAcgccgacagcagcaacagcagcagcgacagccgcAATGCAgccgacggcagcagcagcagtaggatatggccagcagcaacacatgcagcagcaacagttgcagctgcagcctacacatcagcagcaacagcaacaacaacatcaacagcagcaacatcaacaacagcagcagcagcaacagctaatgctgcagcagcaacacgcacaccagcaacagcagcagcagcagcaacaattgctacCGCAGCAGCACGCACATCAGCAACatctacagcagcaacagcagcagcagcatttgggCATGACGCCCGCGctgcaccaccaccaccatcatcatcatcaccaccaGCAGCTGTCGCTGCACCAGAACCACCTGTACTTCAATGGCCACCTGGGgggccatcatcatcatcatcatcggcaGCTCTTTAGCCATTTGCAGAGCGCACTTTTGCCGCTCAGTGTCAATGGCGAACCTATCAAACTGCCCGACAATTTGGAGAGCCTGCCAAGAGCCGACAGTTTCCCATCGCAGCGACATCGTTGGAATACAAATGAGGAAATCGCAGCGATTCTTATCAGCTTTGATAAGCACAGCGAATGGCAATCAAAAGAAGTCAAAACAAGACCGAAGAGCGGCTCCCTGCTGCTCTACTCGCGCAAGAAGGTGCGCTACAGACGCGACGGCTACTGCTGGAAGAAGCGCAAGGATGGCAAAACGACCCGCGAGGATCACATGAAACTTAAAGTACAAGGCACTGAGTGCATCTATGGTTGTTATGTACACTCGGCCATATTGCCCACATTTCATCGCAGATGTTACTGGCTATTGCAGAATCCGGACATTGTTTTGGTGCATTATCTGAATGTACCCTATCCGGATGATAATAAAATGGCCGTCATAGCGCCGAGCATCACGCTCTGGGGCGACAAGAAGGAGTGGACCAAGGAGGAGCTGGTCAGCCAGCTGAAGCCTATGCTGTCCACAGTTAATTCGGATGAGGATTCCGACTCGGGCAATGATATAGAAATTTCGACGGCCGAGACCGTGGAGTCAATTGTGTGCCAGCTGATGGAGAAGCAGCGTCTCTCGCGGCAGGCAGCGCTAGTTAAGCAGCtagactgcggctgcggcgatGCTGCATGTGCGGATGGGAAGACCTGTACGCATCCCGTTATGCGACGCACGGGCGGCATACTGAAATCCGTGTCGGAGAAGCGGCCCAATGATGCCTACAGCACAGCCAATGGCACGCCCAATGTGGTGGTGGCCAGCAAGCTATATTCACGCTGGTCCGAGCGGCACAGGCAGCGTGAGGCGACGCTGCACTTGGACAATCCGCACGCGCAGTTCCACAATgcgacgcagcagctgccgcaggaGTCGGCGATCAAGTTTCAAATCATtccccagcagcaacagcaacaggccaATCACAGCGAGGCCAGCTATCAGCAGCAATATCGAGCTGCCAATCAGATGCTGGCTACAAGAAGCAATCTGTTaatacagcagcaacagcagcagcagcaacaacagcagcagcaacaacagcaacagcagcagcaacaacagcagcagcagcagcaacaacaacaatatcaacagcagcagcaacacttgAACTTGCAGCGCTTTGTGGCCAGTCACAATCAGGGCAATCAAAATCATAATcaacacaataacaacagcaacaacaacaacagctcagcACATTTAAATCATCGCCTGCAAATTGCCAATACAACAattacggcaacaacaagagaggcagccacagcagcagcagcaacagtcgctgCCTCAAATGTCATGGATACGGAACTAATTGAAAAccaaagccagcagcagcagcagcagcagttgaccgcaaatagcaacaaaatcaGCCACAAcacaaataacagcagcaataagcaattaacagcagcaacaacaacaacaacagcagcagcagcagcagcagctcacaCAAACAACGAATTAAATgtgaacaacagcaataatttTACAtacaatcagcagcagcaagcgacTGCTGCCAgcaacacacagcagcagcaacattattataaattgcaACAGACAGCCAcccccaacagcagcaacaacaacggcaacaacagccaaccCCCAGTTGAGGCCATGTGCATGTCACCTGAGCATcagagcagcggcagcagcagcaatcagcTCACAGCAACGTCTTCCGCTGGCAACACTCCTTCCAcgtccagctccagttccttACAGTCGATTATCGATGgcaatcagcagcaacaaattacaacgacaacaacagcaacaacaacaccaacagcagcagtagcagcaacttGTGATAATTTAATGAGCGCCAATGCGCACGCTGAGCTGGagttgggcagcagcagcagcgagcagcatcagcagcagggcggcaacaacaactacagcagcaacaatcagGCCACGGATGCCCACATACTCAATGGTTGTGCCAATTACAGTGCTTCCAgtgacaacagcagccaaataaGCGCCAGCGACGAAAGCAGCAATccaaatattaacaacaacaacaacaacaatcacaacaacagcagcatcagtcgcagccgcagcagcagcaacagcaacgaggaTGAGCCGCAGCAGGCGGAGTCGATGAGCTTCTTCAATGAGACGCTAGATCTGTCGCACGAGGACATACAGCGCACACTCATCGCCAATATGccctacagcagcagcaacaacagcaacaatgcgacggcaacagcaacaacgacagcagcaacagttgtcggcagcaacagcaacagcaataacgaagcgcagcagcaacaacagggaGAGCCGCACAGTTCACGGGAGGATGAGGATACGGCGGATGTGTTCGCGCATCTGGATGCCTTCGATATGCTGGTGGAGTTCCCCGAACTGGATCTGGATGACAAGCAGGCGCTAAACAACACGGCGCTCGAGCAGGTGCACAGCCAGACCGGCGGCGTCAGCTCGTATCCGggcattgccacgcccacatcccaGGCGACGCAGCGCAAGCTGCTTAACATTTGCGATTTCAGTCCGGAATGGTCGTATACGGAGGGCGGGGTCAAGGTTCTCGTCGCCGGACCCTGGACGAGCGATGGCGGCTGTTATACGGTCCTCTTCGATGCACAGCCCGTGCCCACGGTTCTGGTGCAGGAGGGCGTCCTGCGCTGCTATTGCCCCGCCCACGAGGCGGGCCTGGTCACCCTGCAGGTGGCCTGCGGCGGCTATTTGGTCTCCAATGCGGCCATGTTCGAGTACAAGCTGTCGCTGCTCGCGGATGCGCCCTTCGATGCGAGCAGCTCCAACGATTGCCTGTACAAGTTCACCCTACTGAATCGCCTCTCCACCATCGACGAGAAGCTGCAGCTCAAGCTGGAGAACGAGCTGACGATCGATCAGACCTCGCTCTTTCTGGAGCCCAACTTCGAGGAGAAGCTGGTGCTCTATTGCCACCGGCTAACGAAGCACGCCTGGAGCGCGCCCAGCACCGGGGCCAATTGGAGCGTGGGTCTGCGCGGCATGACGCTGTTGCATCTGGCCGCCGCCTTGGGCTATGCCAAGCTGGTGGGCGCCATGCTTAACTGGCGCGCCGAGAATCCACATATCATATTGGAGACGGAGCTGGATGCGCTCAGCCAGGATGTGCACGGTTTTACGCCCCTGGCGTGGGCCTGTGTCCGTGGCCATTTGGAGTGCACACTGTTGCTCTACAAATGGAATCACAATGCTCTCAAGATTAAGACGCAGACGCACCACACGCCCCTCGATCTGGCCAGCCTTAAGGGACACAAGCAGCTGATCCAACAGCTGTGCCGCCTGGAGAAGGAGCGCTGCCGCAAGCCGCAGCTACGCGGCGGTTTGGCTAATCTTTCCATGAACCTGGCCGTGGAAGCAACCACGGAGGAGTCCAGCTATAGCGTCTACGAGCTGGAACTGCAGCGGCGACACGATGGTGTCTTCCTGCGACCCGTTGCCATGCACAGCAATCAAAGTCCGCCGAATAACAGCAGTCGCTACTCGAAGCGTTCTTCCATTGACAGCGGCATCAACATGGACATGCGAAGCAAACCCGGCAAGCCGCTGGCCAGGCTGCACGGaaACTTTGAGCCGCACGACAACTATGCGCTGGGCGTGGACTCGCCCCTCGACTCGCTGAGCGGCAACAATTGCTCCGGTTTGTTGTCGCCGCTGCGTAAAATGGATTTCGCGCTGTGCGAGGTATCCACGGGCGAGTCGAGCCCCATTAACGAGAAAAGCATCGATTGTGATGAGAATTCGACGAGCGTGACCGACACAACCCTAAACAATGGGCTCAACGATGCTGTCGTAGGGGATTCGGATGCAAAGGTTCTGACGCTGGCGGAGCACATTATCGCCGCCATGCCGGAGCGTATCAAGAACGAGGCGGATGAGATGATGGTTCTGGGCAGTCCGTTGACGGAGCCGCTCACCTCGGAGTCCTCGGCGCTGACAGATAGCTTCATGGATCCGCTGCTCGACTCGCTGCCCAACACGCATTTCGACAGCGACTTCAGTTTCGACTTTCAGGATCACAGCTACCGCTATCACGACGTGAGCACGCCCTGCTCCAGCTTGAGTCCGGCCAGTTCGGGACCCTTGCAATCGCCAGCCAGTTATTCCATACTGGGCACCGATCCATCGGTCAGCTCACCGAGTCCGCCGCCATCGACCAAACAGCTGACCGAGTTCCTGCACGCCTCGAGCATATCCCAGTATCCGTTTGAGGCGGACTTCTCCAAGCTAACGCTGACGGACACCGAGCAGCGGGAACTGTACGAGGCGGCCAAGTGCATACAGAAGGCGTATCGCTCGTACAAGGGCCGCCAGAAGCTGGAGGAGCAGAACAAGGAGCGCACGGCCGCCATCGTTATACAGAACTATTATCGTCGCTACAAGCAATACGCCTACTACAGGCAGATGACCAACGCGGCGCTGGTCATTCAGCACGGGTATCGCTCGTATCGGCGGAACAAGCGCTTCAAGAAGTCGCAGCTGGGCGGCACGGGCAGCGAACACGGCAGCGTGAGCAGCAACTCGCAGTGCCTGTCCAGCTTCTATGATCACTACAAGcaggatcagcagcagcagcacgagcTCGGCTCGCAGCCCAGCACGCCCAAGGAGACGAGTCCGTCGGGTCCATTGAAACGTACTTATTCCCAGTCTACACAAAATCAGGCTGCCAGAAAAATACAACAGTTCATGAGACAATCACGCATCAAActacagagagagcgagccgAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTATCAAGGGCAGCAGGAAATGTCGGTATGCCATAGTGAAAATAGcaacagcaacaatctgCAGCACATGCAACCCAATCAATga
Protein Sequence
MAGYRALPLAPVSATAAAAVQPGSGHPGPTMAAYAAHHHQSMTAMSNNGIIYQSAVHASIHSLNTVQSQHRSSTTHHHILATATATATATAAAATAAAAAAAATAAVAVALPTTPTAATAAATAAMQPTAAAAVGYGQQQHMQQQQLQLQPTHQQQQQQQHQQQQHQQQQQQQQLMLQQQHAHQQQQQQQQQLLPQQHAHQQHLQQQQQQQHLGMTPALHHHHHHHHHHQQLSLHQNHLYFNGHLGGHHHHHHRQLFSHLQSALLPLSVNGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHSEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDEDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDAACADGKTCTHPVMRRTGGILKSVSEKRPNDAYSTANGTPNVVVASKLYSRWSERHRQREATLHLDNPHAQFHNATQQLPQESAIKFQIIPQQQQQQANHSEASYQQQYRAANQMLATRSNLLIQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQYQQQQQHLNLQRFVASHNQGNQNHNQHNNNSNNNNSSAHLNHRLQIANTTITATTREAATAAAATVAASNVMDTELIENQSQQQQQQQLTANSNKISHNTNNSSNKQLTAATTTTTAAAAAAAHTNNELNVNNSNNFTYNQQQQATAASNTQQQQHYYKLQQTATPNSSNNNGNNSQPPVEAMCMSPEHQSSGSSSNQLTATSSAGNTPSTSSSSSLQSIIDGNQQQQITTTTTATTTPTAAVAATCDNLMSANAHAELELGSSSSEQHQQQGGNNNYSSNNQATDAHILNGCANYSASSDNSSQISASDESSNPNINNNNNNNHNNSSISRSRSSSNSNEDEPQQAESMSFFNETLDLSHEDIQRTLIANMPYSSSNNSNNATATATTTAATVVGSNSNSNNEAQQQQQGEPHSSREDEDTADVFAHLDAFDMLVEFPELDLDDKQALNNTALEQVHSQTGGVSSYPGIATPTSQATQRKLLNICDFSPEWSYTEGGVKVLVAGPWTSDGGCYTVLFDAQPVPTVLVQEGVLRCYCPAHEAGLVTLQVACGGYLVSNAAMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDEKLQLKLENELTIDQTSLFLEPNFEEKLVLYCHRLTKHAWSAPSTGANWSVGLRGMTLLHLAAALGYAKLVGAMLNWRAENPHIILETELDALSQDVHGFTPLAWACVRGHLECTLLLYKWNHNALKIKTQTHHTPLDLASLKGHKQLIQQLCRLEKERCRKPQLRGGLANLSMNLAVEATTEESSYSVYELELQRRHDGVFLRPVAMHSNQSPPNNSSRYSKRSSIDSGINMDMRSKPGKPLARLHGNFEPHDNYALGVDSPLDSLSGNNCSGLLSPLRKMDFALCEVSTGESSPINEKSIDCDENSTSVTDTTLNNGLNDAVVGDSDAKVLTLAEHIIAAMPERIKNEADEMMVLGSPLTEPLTSESSALTDSFMDPLLDSLPNTHFDSDFSFDFQDHSYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERTAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSQLGGTGSEHGSVSSNSQCLSSFYDHYKQDQQQQHELGSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQRERAEKEKLVHQRRAEYLQNLQYQGQQEMSVCHSENSNSNNLQHMQPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00562457;
90% Identity
iTF_00563162;
80% Identity
-