Basic Information

Gene Symbol
Camta1
Assembly
GCA_001654025.1
Location
NW:1867864-1910845[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6e-49 7.2e-45 150.9 2.2 2 116 426 538 425 538 0.98
2 3 1 1.2e+04 -5.4 4.1 20 104 693 777 676 789 0.56
3 3 0.13 1.5e+03 -1.7 0.0 28 59 909 940 899 945 0.62

Sequence Information

Coding Sequence
ATGAATCTGAATTTAAATCTGAATCTAAATCTTCAGCAAAACCAAACAAAGAATGGCCTGAGCCGTGTTAGCCTGGTCAAATCGCAGAGCAGCGCCAAGCTGAGCCACAGCAATGAggtcgcaacagcagcagcagcaacggcagcaacggcaacaacgacaacaactagcTTACGCGCTGCCAAACTCAAGATCGAGgccatgcaacagcagcgcggcagcagcaacagcaacagcagcagcagcggcagcaacaacaacagcggcagcagcaacatcatcttGCTGCGCGGCACTCGCAACGAGAATGGACAGATCATCATACAGAACAAGCAGGATATACTCAGCCTGctcagcgagcagcagcaggagaaggcgACAGCCATAACGCTCAATCAGCTGCCCACCACGACAACTGTGGCTCGCAAAACGATTGtccagagcaacagcaacagcagtagcagcagcaacagcagcagcaatggcagcaacatcatcaacagctgcagcaacggcagcaacagcagctcggGCAGCATCTCAATTGTAGCCAGCAGCGGCAAGGACACGAATACGATCCTGCTGCAGACGCCCATcaatgccagccagctggAGAGCGTGCTCAAGGCACAggtgaacagcagcaacagcaacagcaacaacaatgccacaaAGCTGATCGAGCGCCCCTTTATGCTGAAGCATGCCTCTCGGAGTCTCAGCTCTGAGAGCAATTGCGACAGCAAGTCGCCCTTTGTGCTGCAGACGCTGAAGCGCCTGGAGAAATCACAGTCTATACTAGTCATACGCAACTCGACGTCTGCCGCCAACAACACGCCGCCGCTGcagttgagcagcagcaacaagagcaacaacgccaacagcagcaatgtgACGCAGCAGACGCATCTGCTGAGCGTTTCGCGCAGCTCGAAGGCGCCCAAAGCGGTGGCTGCTACGTTGCAGAAGCTGAAGGcgccagcggcggcggcagcggcagcggcgggtGGCACGACTATACTGAGACTGAGCAAGAGCGTCAACAAGCAGgtggcaacagcgacaacaacagcagtaacagcagcagcagcagcagcaacagcaacagcagcaacaacaacagtagcagcagcagcaacaactgttgccacaacaaataaactgtccatggagcagcagcagcagcaaacgaatGTGCCACTGGGGAACGATGGCGAACCTATCAAACTGCCCGACAATTTGGAGAGCCTGCCAAGAGCCGACAGTTTCCCATCGCAGCGACATCGTTGGAATACAAATGAGGAAATCGCAGCGATTCTTATCAGCTTTGATAAGCACAGCGAATGGCAATCAAAAGAAGTCAAAACAAGACCCAAGAGCGGCTCTCTGCTGCTCTATTCGAGAAAGAAAGTGCGCTACAGACGCGATGGCTACTGCTGGAAGAAGCGCAAGGATGGGAAGACAACCCGCGAGGATCACATGAAACTTAAAGTACAAGGCACTGAGTGCATCTATGGTTGTTACGTACACTCGGCCATATTGCCCACATTTCATCGCAGATGTTACTGGCTATTGCAGaatcCGGACATTGTTTTGGTGCATTATCTGAATGTGCCGTATCCGGATGATAATAAAATGGCTGTCATTGCGCCGAGCATAACGCTCTGGGGCGATAAGAAGGAGTGGACAAAGGAGGAGCTGGTTAGCCAACTAAAGCCTATGCTGTCCACAGTTAATTCAGATGAAGATTCTGATTCCGGCaatgatattgaaatatcGACGGCCGAAACAGTAGAGTCCATTGTATGCCAGCTGATGGAGAAGCAACGCCTCTCGCGGCAAGCCGCGTTGGTTAAGCAACTCGATTGCGGCTGCGGCGATGCCAACTGTGCGGATGGCAAGACCTGCACGCATCCCGTTATGCGACGCACGGGCGGCATATTGAAGAGCGTCTCAGAGAAGCGGCCCAATGACGCCTACAGCACAGCCAACGGCACACCCAACGTTGTGGTGGCCAGCAAGcTGTATTCACGTTGGTCGGAGCGACACAGGCAGCGCGATGCGACGTTGCATTTGGACAATCCGCACGCACAGTTCCACAATGccacgcagcagctgccgcaagaGTCGGCgatcaaatttcaaatcattccccagcagcaacaacaacagcagcagcagcaggccaatCACAACGAAGGCAGCTATCAGCAGCAATATCGTGGCGCCAATCAGATGCTGGCCACAAGAAACAATCTGAtaatacaacagcagcagcagcagcaacagcaacaacaacatcaacaacaacaatatcaacagcagcaacagcatctgaACTTGCAGCGCTTCGTAGCTAGTCACAATCAAAGCAATCAAAGTCATAATCaactcaacagcaacaacaacaacaacagcaatactAGCAACAGCTCAGCACATTTAAATCATCGCCTGCAAATTGCCAATACAACaataacggcaacaacaagggaggcggcagcagcagcagcagctgtagctgcaacaacaacagcagcaaatgtcATGGATACGGAACTAATTGAAAAccaaagccaacagcagcagcagcagttgaccGCAAATAGCAACAAACTGAGCCACAATacaaataacagcagcaataagcaattaacagtagcagcagcaacagctacaacaacaacaacagcagcagaagcagcagcaacagctcacaCAAACAACGAATTAAATGTcataaacaacagcagcaataactttatatacaatcaacagcagcaagccaacactcaacagcagcaacattattataaattgcaaCAGACACCAAcccccaacagcagctgcagcagcagcggcagcagcaatcaaCCCCCAGTTGAGGCCATGTGTATGTCACCTGAGCATCACAGCAGCAAYagcaacagtagcaacaacaacaaccatcaacttggagcaacagcagcaacgtctTCCGCTGGCAATACTCCTTccacatcagcaacatcatccACCTCGAGTTCCTTACAGTCGATTATCGATggcaatcagcagcaacaaattacaacgacaacagcaacaacaacaacaacagtaggaggagcagcagcaacagcaacaacaacttgtgATAATTTAATGAGCGCCAATGCGCACGCTGAGCTGGAGttgggcggcggcagcagcaacagcagcgagcaacagcagcagcagcaacagcaacagcaacagcagcaggcgtctAGCAACTATAGCGTCAACAATCAGGCAACTGATGCCCAAATTCTTAATGGTTGTGCCAACTACAGTGCTTCCAgtgacaacagcagccaaattagtgacagcaacaacaacagcagcagtcgcagtcgcagcagcagcaacagcaacaacagcaacgacgatGAGCCCCAAGCAGAGTCAATGAGTTTCTTCAATGAGACATTGGATCTATCACATGAGGATATACAACGCACGCTCATTGCCAATATGccctacagcaacaacagcagcaatccaacagcagcagcagtagcagcagcagaggacccagcgacagcagcagcagctagcagcaacaacaacgaaacagCTCAACAGCAATCAGATGAACGCGAAGACGAGGATGCGGCTGATGTATTTGCCAATTTGGATGCCTTTGATATGCTAGTTGAGTTTCCCGAACTGGATCTGGATGATAAGCAGGCATTGAATAATACAGCCGTCGAGCAGGTGCATCATCAGGCCGGTGGCTCCTACCTAGCCACGCCCCAGCCCACAAGCACGCAGCGAAAGTTGCTCAACATTTGTGACTTTAGTCCGGAATGGTCCTACACAGAGGGCGGGGTCAAGGTGCTCGTAGCAGGTCCTTGGACAAGTGATGGAGGCTGCTACACGGTGCTCTTCGATGCACAGCCTGTGCCCACGGTGCTCGTGCAGGAGGGCGTCTTGCGCTGCTACTGTCCGGCACATGAGGCAGGTTTGGTTACCTTGCAGGTGGCATGTGATGGATTCTTGGTCTCCAATGCGGCGATGTTTGAGTACAagttgtcgctgctggcggATGCGCCATTCGATGCCAGCAGCTCCAATGACTGCCTGTACAAGTTCACGCTGCTGAACCGTTTGTCTACCATCGATGAGaaactgcagctgaagctggagaaTGAGCTCACATTCGATCGGACTTCCCTTTTTCTTGAGCCCAACTTTGAGGAGAAGCTGGTGCTCTATTGCCATCGGCTCACGAAGCACGCTTGGAGCACGCCCAGCACTGGCGCCAATTGGAGCGTTGGCCTGCGTGGCATGACCCTGCTTCATCTGGCCGCCGCCTTGGGCTATGCCAAGCTGGTGGGCGCCATGCTCAACTGGCGCGCAGAGAATCCACATATCATACTGGAAACGGAGCTCGACGCACTTAGCCAGGATGTGCATGGCTTTACGCCCTTGGCTTGGGCCTGTGTTCGTGGACATTTGGAGTGCACTCTGCTGCTCTACAAGTGGAATCATAATGCGTTAAAGATCAAGACGCAGGCCCAGCAAACGCCGCTCGATTTGGCCAGCTTGAAGGGccacaagcagctgctgcagcagctgtgccgGCTTGAAAAGGAACGCTGCCGCAAGCCACAGCCACGCGGCGGACTGGCCAATCTCTCCATGAATCTGGCCGTCGAAGCGGCCACTGAGGAGTCCAATTATAGCGTCTACGAGATGGAGCTGCAGCGCAGACATGACGGAGTCTTCCTACGACCTGTGGCGCTTCATAGCAATCAAAGTCCGCCAAATAACAGTAGTCGCTACTCGAAGCGCTCTTCCATAGATAGTGGCATCAACATGGATATGCGCAGCAAATCTGGAAAGCCATTAGCTAGAATGCACGGTAACTATGAGACACATGACAACTATGCTCTGGGCGTGGACTCCCCTTTGGACTCGCTGAGCGGCAACAATTGTTCCGGTCTGCTATCGCCGATGCGTAAAATGGATTTCGCTCTATGCGAGGTATCCACGGGCGAATCGAGTCCCATACACGACAAAGACATCGATTGCGATGACAATTCGACGAGCGTGACTGACACAACCTTAAATAATGAGCTCAACGATGCGGTCGTAGGGGATTCGGATGCAAAAGTTTTGACGCTAGCGGAACATATTATAGCAGCCATGCCAGATAGGATCAAGAACGAAGCACATGAAATGATGGTCTTGGGGAGTCCCTTGACGGAGCCCCTCACCTCAGAGTCGTCGGCTCTGACAGATAGCTTTATGGATCCGCTGCTTGATTCGTTGCCCAATACGCATTTCGATAGCGATTTTAGTTTCGATTTCCATGATCACAGCTATCGATATCATGATGTGAGCACACCTTGCTCTAGTCTGAGTCCCGCCAGTTCTGGTCCTTTGCAATCGCCGGCTAGCTATTCCATACTCGGCACAGATCCTTCGGTCAGCTCACCTAGTCCGCCTCCTTCAACAAAACAATTGACGGAGTTCCTGCACGCTTCCAGCATATCGCAATATCCCTTCGAGGCAGACTTCTCGAAGCTAACGCTCACAGACACGGAGCAGCGTGAGCTCTACGAGGCAGCCAAGTGCATACAGAAGGCATATCGGTCGTACAAGGGCCGCCAGAAGATGGAGGAGCAGAATAAGGAGCGTACCGCTGCAATCGTTATACAAAACTATTATCGTCGCTATAAGCAATACGCTTACTACAGACAGATGACCAATGCAGCTCTAGTCATACAGCACGGCTATCGGTCGTATCGACGCAATAAGCGCTTCAAGAAGTCCCAACTGGGCACTGGCAGCGAACAGGGCAGCGTGAGCAGCAATTCCCAATGCCTGTCCAGCTTTTACGATCACTACAAACaggatcagcagcaacagcaggagctcAGTTCACAGCCCAGCACGCCCAAGGAGACGAGTCCTTCGGGTCCCTTGAAGCGTACATACTCGCAGTCGACACAAAATCAGGCGGCCAGAAAAATACAACAGTTCATGAGACAATCACGCATCAAActacagagagagcgagccgAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTATCAAGGGCAACAGGAAATGGCAGTATGCCATAGTGAGAATAGcaacaataacatcaaCAATCTGCAACATATGCAATCCAATCAATGA
Protein Sequence
MNLNLNLNLNLQQNQTKNGLSRVSLVKSQSSAKLSHSNEVATAAAATAATATTTTTSLRAAKLKIEAMQQQRGSSNSNSSSSGSNNNSGSSNIILLRGTRNENGQIIIQNKQDILSLLSEQQQEKATAITLNQLPTTTTVARKTIVQSNSNSSSSSNSSSNGSNIINSCSNGSNSSSGSISIVASSGKDTNTILLQTPINASQLESVLKAQVNSSNSNSNNNATKLIERPFMLKHASRSLSSESNCDSKSPFVLQTLKRLEKSQSILVIRNSTSAANNTPPLQLSSSNKSNNANSSNVTQQTHLLSVSRSSKAPKAVAATLQKLKAPAAAAAAAAGGTTILRLSKSVNKQVATATTTAVTAAAAAATATAATTTVAAAATTVATTNKLSMEQQQQQTNVPLGNDGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHSEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDEDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDANCADGKTCTHPVMRRTGGILKSVSEKRPNDAYSTANGTPNVVVASKLYSRWSERHRQRDATLHLDNPHAQFHNATQQLPQESAIKFQIIPQQQQQQQQQQANHNEGSYQQQYRGANQMLATRNNLIIQQQQQQQQQQQHQQQQYQQQQQHLNLQRFVASHNQSNQSHNQLNSNNNNNSNTSNSSAHLNHRLQIANTTITATTREAAAAAAAVAATTTAANVMDTELIENQSQQQQQQLTANSNKLSHNTNNSSNKQLTVAAATATTTTTAAEAAATAHTNNELNVINNSSNNFIYNQQQQANTQQQQHYYKLQQTPTPNSSCSSSGSSNQPPVEAMCMSPEHHSSNSNSSNNNNHQLGATAATSSAGNTPSTSATSSTSSSLQSIIDGNQQQQITTTTATTTTTVGGAAATATTTCDNLMSANAHAELELGGGSSNSSEQQQQQQQQQQQQQASSNYSVNNQATDAQILNGCANYSASSDNSSQISDSNNNSSSRSRSSSNSNNSNDDEPQAESMSFFNETLDLSHEDIQRTLIANMPYSNNSSNPTAAAVAAAEDPATAAAASSNNNETAQQQSDEREDEDAADVFANLDAFDMLVEFPELDLDDKQALNNTAVEQVHHQAGGSYLATPQPTSTQRKLLNICDFSPEWSYTEGGVKVLVAGPWTSDGGCYTVLFDAQPVPTVLVQEGVLRCYCPAHEAGLVTLQVACDGFLVSNAAMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDEKLQLKLENELTFDRTSLFLEPNFEEKLVLYCHRLTKHAWSTPSTGANWSVGLRGMTLLHLAAALGYAKLVGAMLNWRAENPHIILETELDALSQDVHGFTPLAWACVRGHLECTLLLYKWNHNALKIKTQAQQTPLDLASLKGHKQLLQQLCRLEKERCRKPQPRGGLANLSMNLAVEAATEESNYSVYEMELQRRHDGVFLRPVALHSNQSPPNNSSRYSKRSSIDSGINMDMRSKSGKPLARMHGNYETHDNYALGVDSPLDSLSGNNCSGLLSPMRKMDFALCEVSTGESSPIHDKDIDCDDNSTSVTDTTLNNELNDAVVGDSDAKVLTLAEHIIAAMPDRIKNEAHEMMVLGSPLTEPLTSESSALTDSFMDPLLDSLPNTHFDSDFSFDFHDHSYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKMEEQNKERTAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSQLGTGSEQGSVSSNSQCLSSFYDHYKQDQQQQQELSSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQRERAEKEKLVHQRRAEYLQNLQYQGQQEMAVCHSENSNNNINNLQHMQSNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00562457;
90% Identity
iTF_00554371;
80% Identity
-