Basic Information

Gene Symbol
Camta1
Assembly
GCA_003285905.2
Location
NW:685352-734894[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 6e-49 7.7e-45 150.9 2.2 2 116 399 511 398 511 0.98
2 4 1 1.3e+04 -4.6 3.3 57 103 703 750 650 778 0.55
3 4 0.5 6.5e+03 -3.6 0.1 73 99 888 915 880 923 0.41
4 4 0.57 7.3e+03 -3.8 0.1 59 93 1907 1942 1901 1947 0.68

Sequence Information

Coding Sequence
ATGAATCTGAATTTGAATCTGAATCTAAATCTGCAGCAAAACCAAACAAGGAATGGCCTGAGCCGTGTTAGCCTGGTCAAATCGCAGAGCAGCGCCAAGCTGAGCCACAGCAATGAGgccgccacagcaacaacaacagcaacaaggacaACAAGCTTACGCGCTGCCAAACTTAAGATCGAGgccatgcaacagcagcgcagcagcagcatcagcaacagcaacagcaacagcagcagcagcagcaacatcatcttGCTGCGCGGCACTCGCAACGAGAATGGACAGATCATCATACAGAACAAGCAGGATATACTCAGCCTGCTCAGCGAACAGCCGCAGGATAAGGCCACAGCCCTAACGCTTAACCAGctgcccacaacaacaactgtggcACGCAAAACGATTGTCCAAAGCAACAGCCACATCAGcaacagtggcagcggcaacagcagcaacagcagctcggGCAGCATCTCGATTGTAGCCAGCAGCGGCAAGGACACGAACACGATCCTCCTGCAAACGCCCATCAATGCCAGCCAGCTGGAGAGTGTGCTCAAGGCGCAGgtgaacagcagcaacagcaacaacaatgccacaAAGCTTATCGAGCGTCCCTTTATGCTGAAGCACGCATCTCGTAGTCTCAGCTCTGAGAGCAATTGCGATAGCAAATCGCCGTTTGTGCTGCAAACGCTGAAGCGTCTGGAGAAGTCGCAGTCTATACTGGTCATACGCAACTCCACGTCTGCGGCCAACAACACGCCGCCGCTGcagttgagcagcagcagcagcaacaacaacaacagcaacaagagcaacaacagcaacagcaacaatgtggCACAGCAGACGCATTTGCTGAGCGTTTCGCGCAGCTCGAAGGCGCCCAAAGCGGTGGCTGCTACGTTGCAGAAGCTGAAGGCgccagcggcggcggctgcggcagcggctggTGGCACGACCATATTGAGACTGAGCAAGAGCGTCAACAAGCAGGTGACAACGGcgactacaacagcaacagcagcagcaacagcaacagcagcaactgttgccacaacaaataaactgtccatggagcagcagcagcagcagccgctaaCGAATGTGCCACTGGGGAACGATGGCGAACCTATCAAACTGCCCGACAATTTGGAGAGCCTGCCAAGAGCCGACAGTTTCCCATCGCAGCGACATCGCTGGAATACAAATGAGGAAATCGCAGCGATTCTTATCAGCTTTGATAAGCACAGCGAATGGCAATCAAAAGAAGTCAAAACAAGACCGAAGAGCGGCTCTCTGTTGCTCTACTCGAGAAAGAAGGTGCGCTACAGACGCGATGGCTACTGCTGGAAGAAACGCAAGGATGGGAAGACAACCCGCGAGGATCACATGAAACTTAAAGTACAAGGCACTGAGTGCATCTATGGTTGTTACGTACACTCGGCCATATTGCCCACATTTCATCGCAGATGTTACTGGCTATTGCAGAATCCGGACATTGTTTTGGTGCATTATCTGAATGTGCCCTATCCGGACGATAATAAAATGGCCGTCATTGCGCCGAGCATAACGCTCTGGGGCGATAAGAAGGAGTGGACCAAAGAGGAGCTGGTTAGTCAACTAAAGCCTATGCTGTCCACAGTGAATTCAGATGAGGACTCCGATTCGGGCAATGATATTGAGATATCGACGGCCGAAACAGTGGAGTCTATCGTATGCCAGCTGATGGAGAAGCAACGTCTCTCGCGGCAAGCCGCGCTAGTCAAACAACTCGATTGCGGCTGCGGCGATGCAACCTGTGCAGATGGCAAGACCTGCACGCATCCCGTTATGCGACGCACGGGCGGCATATTGAAGAGCGTCTCAGAGAAGCGACCCAATGATGCCTACAGCACAGCCAACGGCACACCCAACGTTGTGGTGGCCAGCAAGCTTTATTCACGCTGGTCGGAGCGACACAGACAGCGTGATGCGACGCTGCATTTGGACAATCCACACGCGCAGTTTCACAATGCaacgcagcagctgccgcaagAGTCGGcgatcaaatttcaaatcattccccagcagcaacagcagcagcagcagcaggccaaTCACAGCGAAGGAAGCTATCAGCAGCAATATCGTGGCGCCAATCAGATGTTGGCCACAAGAAACAATCTGATaatacagcagcaacagcagcaacaacaacagcagcagcagcagcaacagcaacaacaatatcaacagcagcagcaacatctaaACTTGCAGCGCTTTGTAGCTAGTCACAATCAAAGCAATCAAAGTCATAAtcaacacagcagcaacaacagcaataatagcAACAGCTCAGCACATTTAAATCATCGCCTGCAAATTGCCAATACAACAATAACGGCGACAACAAgggaggcagcagcagtagcagcagcagcagcagcagcaacaacaacagcagcagcaaatgtcaTGGATACGGAACTAATTGAAAAccaaagccagcagcagcagcagcagcagcagttgaccGCAAATAGCAACAAACTGAGCCACAATacaaataacagcagcaataagcaattaacagcagcagcaacaacaacagcagcaaatcaaacaacaacagcagcaggagcaacagcaacagctcacACAAACAACGAATTAAATgtcataaacaacaacagcaataactttatatacaatcaacagcagcagcaagccaacactcaacagcagcaacattattataaattgcaaCAGACATCcacccccaacaacaacaacaacagtagtagcagcagcagcagcagcagcaatcaacCCCCAGTTGAGGCCATGTGCATGTCACCTGAGCatcatagcagcagcagcagcagcagcaacaacaatcagcttggggcaacagcagcaacgtctTCCGCTGGCAATACTCCTTCCacatcagcaacatcatccACCTCCAGTTCCTTACAGTCGATTATCGATggcaatcagcagcaacaaattacaacgacaacagcagcaacaacaacagcagcaacaacaacatgtgaTAATTTAATGAGCGCCAATGCGCACGCTGAGCTggacggcggcagcagcaacaacagcagcgagcagcagcagcaacagcagcaacagcagcaacagcagcagcagcagcaggcgtctAGCAACTATAGCGTCAACAATCAGGCAACGGATGCCCAAATTCTTAATGGTTGTGCCAACTACAGTGCTTCCAGTGATAACAGCAGCCAAATTagtgacagcaacaacaacagcagcagtcgcagtcgcagcagcagcaacagcaacaatagcaacgaCGATGAACCGCAAGCAGAGTCAATGAGCTTCTTTAATGAGACATTAGATCTATCGCACGAGGATATACAACGCACGCTCATAGCCAATATGccctacagcaacagcagcaatagtcaagcagcagcagcagcaggaacaacgacaacagcaacagctaattGCAATAACAACGAAacagctcagcagcagcaacaccaacagcaacagcaacactcaAACGAACGTGAAGATGAGGACACGGCAGATGTGTTTGCCAATTTGGATGCGTTTGATATGCTGGTTGAATTTCCGGAACTGGATCTGGATGATAAGCAGGCCTTGAATAACACGGCGCTCGAGCAGGTGCACAGTCAGGCAGGTAGTTCTTATCTAGCCACGCACAACAACACGACCACCCAGCGCAAGCTGCTCAACATTTGTGACTTCAGTCCGGAATGGTCTTATACAGAGGGTGGAGTCAAGGTGCTCGTGGCAGGTCCTTGGACGAGTGATGGTGGCTGCTATACGGTGCTGTTCGATGCACAGCCTGTGCCCACGGTGCTCGTCCAGGAGGGCGTCTTGCGCTGCTATTGCCCAGCACATGAGGCAGGTTTGGTTACCTTGCAGGTGGCATGTGGCGGCTTTTTGGTCTCCAATGCGGCGATGTTTGAGTACAAATTGTCGCTGCTAGCGGATGCGCCATTCGATGCCAGCAGCTCCAACGACTGTCTGTACAAATTTACGTTGTTGAATCGTTTGTCTACCATAGATGAGAAACTGCAGCTCAAGCTGGAGAATGAGCTCACATTCGATCAAACTTCCCTTTTTCTTGAGCCCAACTTCGAGGAGAAGTTGGTGCTCTATTGCCATCGGCTGACGAAGCACGCCTGGAGCACGCCCAGCACTTGCGCCAATTGGAGCGTTGGCTTGCGTGGCATGACCCTACTGCATCTGGCCGCCGCCTTGGGCTATGCCAAGCTGGTGGGCGCCATGCTCAACTGGCGTGCAGAGAATCCACATATCATACTCGAAACAGAGCTGGATGCACTTAGCCAGGACGTGCATGGGTTTACGCCCTTGGCTTGGGCCTGTGTTCGCGGACATTTGGAGTGCACTCTGCTGCTCTACAAATGGAATCATAATGCGCTGAAGATCAAGACGCAGGCGCAGCAAACGCCACTCGATTTGGCCAGCTTGAAGGGCcataagcagctgctgcagcagttgtgCCGGCTTGAAAAGGAACGCTGCCGCAAGCCACAGCCACGTGGTGGCCTGGCCAATCTCTCCATGAATCTGGCCGCCGAGGCGGCCACTGATGAGTCCAGCTATAGTGTCTATGAACTGGAACTGCAGCGCAGGCATGACGGAGTCTTTCTACGACCTGTGGCGCTTCATAGCAATCAAAGTccgccaaacaacaacagtcgctACTCGAAGCGCTCTTCCATAGACAGCGGCATCAACATGGACATGCGCAGCAAATCTGGAAAGCCTTTGGCTAGGCTGCACGGCAACTATGAGACACATGACAACTATGCTTTGGGCGTGGATTCCCCTTTGGATTCGCTTAGCGGCAACAATTGCTCTGGTTTGCTATCGCCGATGCGTAAAATGGATTTTGCTCTGTGCGAGGTATCCACGGGCGAATCGAGTCCCATACACGACAAAGACATCGATTGCGATGACAATTCGACGAGCGTGACCGACGCAACTTTAAACAATGAACTCAACGATGCGGTCGTAGGGGATTCCGATGCAAAAGTTTTAACGCTAGCGGAACATATTATAGCAGCTATGCCAGACAGAATCAAGAACGAAGCGCACGAAATGATGGTGTTGGGCAGTCCTTTAACGGAGCCACTCACCTCGGAGTCATCGGCTCTGACAGATAGCTTTATGGATCCGCTGCTCGATTCTTTGCCCAATACGCATTTCGATAGCgattttagttttgattttcatGACCACAGCTATCGATATCATGATGTGAGCACACCTTGCTCCAGTTTGAGTCCCGCCAGTTCGGGTCCTCTGCAATCGCCGGCTAGCTACTCAATTCTAGGCACAGATCCGTCAGTCAGCTCACCCAGTCCGCCGCCTTCAACAAAACAGTTGACGGAGTTTCTGCATGCCTCCAGCATTTCGCAATATCCATTCGAGGCAGATTTCTCAAAGCTAACGCTCACAGACACCGAACAGCGGGAGCTCTACGAGGCAGCCAAGTGCATACAGAAGGCATATCGTTCGTACAAGGGCCGCCAGAAGATGGAGGAGCAGAACAAGGAGCGTACCGCTGCAATTGTCATCCAAAACTATTACCGTCGCTACAAGCAATACGCTTACTACCGACAGATGACCAATGCAGCTCTAGTCATACAGCACGGCTATCGCTCGTATCGACGCAACAAGCGCTTCAAGAAGTCCCAACTGGGCACAGCCAGCGAACAGGGCAGCGTCAGCAGTAATTCCCAATGCCTCTCCAGCTTCTACGATCACTACAAGCaggatcaacagcagcagcaggagctcaGCTCACAGCCCAGCACGCCCAAGGAGACGAGTCCGTCGGGTCCTCTGAAGCGTACATATTCCCAGTCTACACAAAATCAGGCTGCCAGAAAAATACAACAGTTCATGAGACAATCACGCATCAAActacagagagagcgagccgAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTATCAAGGGCAACAGGAAATGTCAGTATGCCATAGTGAGAATAGcaacaacaccaataacaacaacaatctgcAGCATATGCAATCCAATCTATGA
Protein Sequence
MNLNLNLNLNLQQNQTRNGLSRVSLVKSQSSAKLSHSNEAATATTTATRTTSLRAAKLKIEAMQQQRSSSISNSNSNSSSSSNIILLRGTRNENGQIIIQNKQDILSLLSEQPQDKATALTLNQLPTTTTVARKTIVQSNSHISNSGSGNSSNSSSGSISIVASSGKDTNTILLQTPINASQLESVLKAQVNSSNSNNNATKLIERPFMLKHASRSLSSESNCDSKSPFVLQTLKRLEKSQSILVIRNSTSAANNTPPLQLSSSSSNNNNSNKSNNSNSNNVAQQTHLLSVSRSSKAPKAVAATLQKLKAPAAAAAAAAGGTTILRLSKSVNKQVTTATTTATAAATATAATVATTNKLSMEQQQQQPLTNVPLGNDGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHSEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDEDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDATCADGKTCTHPVMRRTGGILKSVSEKRPNDAYSTANGTPNVVVASKLYSRWSERHRQRDATLHLDNPHAQFHNATQQLPQESAIKFQIIPQQQQQQQQQANHSEGSYQQQYRGANQMLATRNNLIIQQQQQQQQQQQQQQQQQQYQQQQQHLNLQRFVASHNQSNQSHNQHSSNNSNNSNSSAHLNHRLQIANTTITATTREAAAVAAAAAAATTTAAANVMDTELIENQSQQQQQQQQLTANSNKLSHNTNNSSNKQLTAAATTTAANQTTTAAGATATAHTNNELNVINNNSNNFIYNQQQQQANTQQQQHYYKLQQTSTPNNNNNSSSSSSSSSNQPPVEAMCMSPEHHSSSSSSSNNNQLGATAATSSAGNTPSTSATSSTSSSLQSIIDGNQQQQITTTTAATTTAATTTCDNLMSANAHAELDGGSSNNSSEQQQQQQQQQQQQQQQQASSNYSVNNQATDAQILNGCANYSASSDNSSQISDSNNNSSSRSRSSSNSNNSNDDEPQAESMSFFNETLDLSHEDIQRTLIANMPYSNSSNSQAAAAAGTTTTATANCNNNETAQQQQHQQQQQHSNEREDEDTADVFANLDAFDMLVEFPELDLDDKQALNNTALEQVHSQAGSSYLATHNNTTTQRKLLNICDFSPEWSYTEGGVKVLVAGPWTSDGGCYTVLFDAQPVPTVLVQEGVLRCYCPAHEAGLVTLQVACGGFLVSNAAMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDEKLQLKLENELTFDQTSLFLEPNFEEKLVLYCHRLTKHAWSTPSTCANWSVGLRGMTLLHLAAALGYAKLVGAMLNWRAENPHIILETELDALSQDVHGFTPLAWACVRGHLECTLLLYKWNHNALKIKTQAQQTPLDLASLKGHKQLLQQLCRLEKERCRKPQPRGGLANLSMNLAAEAATDESSYSVYELELQRRHDGVFLRPVALHSNQSPPNNNSRYSKRSSIDSGINMDMRSKSGKPLARLHGNYETHDNYALGVDSPLDSLSGNNCSGLLSPMRKMDFALCEVSTGESSPIHDKDIDCDDNSTSVTDATLNNELNDAVVGDSDAKVLTLAEHIIAAMPDRIKNEAHEMMVLGSPLTEPLTSESSALTDSFMDPLLDSLPNTHFDSDFSFDFHDHSYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKMEEQNKERTAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSQLGTASEQGSVSSNSQCLSSFYDHYKQDQQQQQELSSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQRERAEKEKLVHQRRAEYLQNLQYQGQQEMSVCHSENSNNTNNNNNLQHMQSNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00562457;
90% Identity
-
80% Identity
-