Basic Information

Gene Symbol
Camta1
Assembly
GCA_035046045.1
Location
JAWNOI010000188.1:3553511-3587495[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1 1.6e+04 -8.8 9.3 29 69 192 232 145 265 0.46
2 3 5.7e-49 9e-45 151.0 2.2 2 116 314 426 313 426 0.98
3 3 0.62 9.7e+03 -3.9 3.0 18 96 581 662 566 674 0.64

Sequence Information

Coding Sequence
ATGGCCGGCTATCGTGCGCTGCCCCTGGCGCCCGTCTCGGCCAGCAGCATGACGGCAACggctgcagtgcagccaaATGGCTCAGCGATGGCCTAtgcgcatcatcatcatcagtcGATGACGGCCATGTCGAATAACGGTATTATCTATCAGTCGGCGGTGCATGCCTCCATACACAGTTTGAATACAGTACAAAGCCAGCATCATCGTTCGTCTGCTACCACACATCACATTCTAGCGacggcaacagctacagcggcagcagcagcaacggcagcagcagcaacagccgcggCAGCTGTGGCCGTTGCGCTGCCCACACCaacgccgacagcagcagcagcagcggcaacggcagcaacactacagccgacggcagcagcaagcgtctatggacagcagcagcagcaacagcaacaacatatgccgcaaacacagcagcaacagcaacagttgcagctgcaagcctcgcatcagcagcagcagcagcaacattctcaacagcagcagctcatgctgcatcagcagcaacacacgcagcatcagcagcaacaacaattgctgccacatacgcagcagcaacacacacaacagcagcagcagcaacaacatcagcattcacagcagcaacagcagcatcaacagcaacaccatctgcagcagcatcagcagcagcaacaacaacagcagcagcagcagcagcagctaggCATGACGGCCGCgctgcaccaccaccaccaccatcaccaccaccaccagcagctgtCGCTGCACCAGAACCACCTGTACTTCAATGGCTTAGGCCATCATCACCACCATCATCACAGGCAGATCTTTAGCCACTTGCAGAGCGCGCTCTTGCCGCTCAGTGTCAATGGCGAACCTATCAAACTGCCCGACAATTTGGAGAGCCTGCCAAGAGCCGACAGTTTCCCATCGCAGCGCCATCGCTGGAATACAAATGAGGAAATCGCAGCGATTCTTATCAGCTTTGATAAGCACAGCGAATGGCAATCAAAAGAAGTCAAAACAAGACCCAAGAGcggctcgctgctgctctactCACGCAAGAAGGTGCGCTACCGACGCGATGGCTATTGCTGGAAGAAGCGCAAGGATGGCAAGACGACGCGTGAGGATCACATGAAACTGAAAGTACAAGGCACTGAGTGCATCTATGGTTGTTACGTACACTCGGCCATATTGCCCACATTTCATCGCAGATGTTACTGGCTCCTGCAGAATCCGGACATTGTTTTGGTGCACTATCTGAATGTGCCGTATCCGGATGATAATAAAATGGCCGTCATTGCGCCGAGCATCACGCTCTGGGGCGATAAGAAGGAGTGGACCAAGGAGGAGCTGGTCAGTCAGCTGAAACCGATGTtatCCACTGTGAACTCCGACGAAGACTCCGACTCGGGCAACGACATTGAGATCTCGACTGCCGAGACAGTGGAGTCAATTGTCTGCCAACTGATGGAGAAGCAGCGTCTCTCgcggcaggcagcgctggTCAAGCAGTTGGACTGCGGCTGTGGCGATGCTGCCTGCGCGGATGGCAAGACCTGCACACATCCCGTGATGCGGCGCACGGGCATATTGAAATCCGTATCGGAGAAGCGCGCCAGCGATGCCTACGGCACGCACAGTGGGCCCAATGGCACGCCCAATGTGGTGGTGGCCAGCAAGCTCTATTCGCGCTGGTCGGAGCGTCATCGGCAGCGCGAGACGTCGCTGCATCTGGACAATCCGCACGCGCAGTTCCACAATGCCACGCAGCAATTGCCGCAGGAGTCGGCGATCAAATTCCAAATCattccgcagcagcagcaacagcaacagcagcagggcaaTCATAGCGATGCCAGCAACTATCAGCAGCAATATCGTGGTGCCAATTCAATGCTGGCCACAAGAAGCAATCTGAtaatacagcagcagcaacagtatcagcagcagcagcaacacttgaACTTGCAGCGCTTTGTGGCCACTCACAATCAGAGCAATCAAAGTCAtaatcacagcagcagcagcaacaacaacagcagcaacaacagcagcaataacaacaacaacaatactgcACATTTAAATCATCGCCTGCAAATTGCCAACACAacaattacagcaacaacaagggaggcagcagcagcagcagcagcaacaacaacagcagcagcaactgcaacattgTCGGCCTCAAATGTCATGGATACGGAACTAATTGAAAACcaaagccaacagcagcagcagctgaccacaaatgcaaattcgtGCAACAAAATaagccacaacagcagcagcagcaagcaattaacagcagcaacagcaacaacaacaatagcagcagcggcagcaacagctcaaACAAACAACGAATTAAATGCGAGCAGCAATAACTTTATATACAATCAAGCGAAtgcttccagcagcagcagcaacagcaacacacagcagcagcagcaacattattataaattgcagcaggcagcagcagcagccacccccagcagcagcaacagtcaaCCCCCAGTTGAAGCCATGTGCATGTCGCCTGAGCATCATcacggtagcagcagcaatagcaacaacaacaacagtaacaacaacaacaacaacaacaatcagctcACAGCAACAACGTCTTCCGCTGGCAACACCCCTTCCACGTCGGCAACATCATCCACCTCGAGTTCCTTACAGTCGATTATCGATggcaatcagcagcaacaaattacaacgacaacaacagcaacagcagcagcagcagcagcagcaacagcagcaaattgtGATAATTTAATGAGCGCCAATGCGCTCGCCGAGCTGGAGTTGGGCGAGCAGGCGGCGCtgagcaactacagcagcagcaacagcaacagcaatagcaacagcaacaacaatcaggcCATGGATGCGCAGAGCAAGGCCTCCTCCCAGCAACACAATGGTTGTGCAAACTACAGTGCTTCCACGAGTGATAACAGTAGCCAAATTAGCgccagcgacaacgacagcagctacagcgtcaacagcaacaacaatctgcttaacagcagcagcaacaacaacgatgaggagcaacagcagcagcaacagcagcagcaatcagcGGATGCGCTGAGCTTCTTCAATGAGACGCTGGATTTGTCCCACGAGGACATACAGCGCACGCTCATTGCCAACATGccctacaacaacagcagcaacaacaacaacagcagcagcagcacagcagcaacagcagctgtgagcacagcagcaacagttgctacATGCGAGCGACAGAAGCCCGAGCGCGATGAGGAGGACACAGCGGATGTTTTTGCCAATTTGGATGCCTTCGATATGCTTGTCGAGTTTCCCGAACTTGATCTGGATGACAAGCAGGCGTTAAACAACACTGCGCTGgaacaggagcaacagcagcaacagcagctgcagcagcagcacgccagCAACTCTGGCTATTTGGGCGTCGCTACAGCACCACGCAAGCTGCACAACATCTGCGACTTTAGCCCGGAATGGTCTTACACCGAGGGCGGCGTCAAGGTGCTCGTCGCCGGCCCCTGGACGAGCGATGGCGGCTGCTATACGGTGCTCTTCGATGCACAGCCCGTGCCCACGGTGCTCGTGCAGGAGGGCGTGCTGCGCTGCTATTGCCCCGCCCATGAGGCGGGCGTTGTCACACTGCAAGTGGCCTGCGGTGGTTTCCTCGTCTCCAATGCGGCCATGTTCGAGTACAAACTGTCGCTGCTCGCCGACGCGCCCTTCGATGCGAGCAGCTCCAACGATTGCCTGTACAAGTTCACGCTGCTCAATCGCCTCTCCACCATCgacgagaagctgcagctcaagctggAGAACGAGCTGGCGACCGATCACACAGCGCTCTATCTGGAGCCCAACTTCGAGGAGAAGCTTGTCGCGTATTGCCACAAGCTGATGAAGCACGCCTGGAcaacgcccagcagcagcgtgaccAGCTGGAGCGTTGGCCTGCGCGGCATGACGCTGTTGCATCTGGCCGCCGCGCTGGGCTATGCCAAACTCGTGGGCGCCATGCTCAATTGGCGCTCGGAGAATCCACATATCATACTCGAGACCGAGCTGGATGCACTCAGTCAGGATGTGCATGGCTTCACGCCGCTCGCCTGGGCCTGTGTACGTGGCCATTTGGAGTGCACGCTGTTGCTGTACAAGTGGAATCACAATGCGCTCAAGATCaagacacaggcacagcagaCGCCGTTGGATCTGGCCAATCTGAAGGGACACAAGCAGTTGCTGGCGCAGCTCTGCCGGCTGGAGAAGGAGCGCTGCCGCAAGCCGCATCCACGTGGTGGACTCGCCAATCTGTCTATGAATCTAGAGTCGACTGCGGCAACGACAATGACGGGTGAGGATTCGAGCTACAGCATCtacgagctggagctgcagcgtcGCCACGATGGCGTCTTTCTGCGACCCGTTGCGATGCACAGCAATCAAAGTccgcccaacagcagcagtcgctacTCGAAGCGCTCCTCCATCGACAGCGGCATCAACATGGACATGCGCGGCAAGTCCAGCAAGCCGCTGGCACGACTTCACAGCAACTTTGATGCACATGATAACTATGCACTGGGCGTAGACTCTCCGCTGGACTCCCTGACGGCGACCAACTGCTCGGGGCTGCTATCGCCGCTGCGCAAAATGGACTTTGCTCTCTGCGAGGTATCCACGGGCGAGTCGAGTCCCATACACGACAAAGACATCGATTGCGATGAGAATTCGACGAGCGTGACGGACGCGACGATTAACAATGAGCTGAACGAAGCTGTCGTAGGGGACTCGGATGCCAAGGTGCTGACACTGGCCGAGCACATCATAGCCGCCATGCCGGAGCGCATcaagAACGAGGCGGatgagctgatggtgctgggCAGCCCCTTGACGGAGCCACTCACCTCGGAGTCATCGGCGCTGACGGACAGCTTCATGGATCCACTGCTGGACTCGCTGCCCAACACGCACTTCGACAGCGACTTTAGCTTTGATTTCCACGATCACAGCTATCGCTATCATGACGTGAGCACACCCTGCTCCAGCCTCAGCCCGGCCAGCTCGGGCCCGCTGCAGTCGCCGGCCAGTTACTCCATACTCGGCACAGATCCCTCTGTCAGCTCGCCCAGTCCGCCGCCGTCGACGAAGCAACTGACGGAATTTCTGCACGCATCCAGCGTATCGCAGTACCCATTCGAAGCGGACTTCTCCAAGCTGACGCTGACCGACACGGAGCAGCGCGAGCTGTACGAGGCGGCCAAGTGCATACAGAAGGCCTATCGCTCGTACAAGGGACGGCAGAAGCTCGAGGAGCAGAACAAGGAGCGCACCGCTGCGATTGTCATACAGAATTATTACAGGCGCTACAAGCAGTATGCGTACTACAGGCAGATGACCAACGCGGCGCTGGTCATACAGCATGGCTATCGATCGTATCGGCGGAATAAGCGCTTCAAGAAGTCGCAGCACACGCCCAGCTCGGGCGCTGGCCTGGGCGGCGCCAGCGAGCATGGCGGCGGCAGTGTGAGCAGCAATTCGCAGTGTCTGTCCAGCTTTTATGACAACTACAAAcaggatcagcagcagcagatcgagcTGAGCTCGCAGCCCAGCACGCCCAAGGAGACGAGTCCGTCGGGACCGCTAAAACGTACTTATTCGCAGTCTACGCAGAATCAGGCTGCCCGAAAGATACAACAGTTCATGAGACAATCACGCATCAAActacagagagagcgagccgAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTATCAAGGGCAGCAGGAAATGTCAGTTTGCCATAGTGACGGCAGTGCCGGCAatcatctgcagcagctgcaacccAATCAATGA
Protein Sequence
MAGYRALPLAPVSASSMTATAAVQPNGSAMAYAHHHHQSMTAMSNNGIIYQSAVHASIHSLNTVQSQHHRSSATTHHILATATATAAAAATAAAATAAAAVAVALPTPTPTAAAAAATAATLQPTAAASVYGQQQQQQQQHMPQTQQQQQQLQLQASHQQQQQQHSQQQQLMLHQQQHTQHQQQQQLLPHTQQQHTQQQQQQQHQHSQQQQQHQQQHHLQQHQQQQQQQQQQQQQLGMTAALHHHHHHHHHHQQLSLHQNHLYFNGLGHHHHHHHRQIFSHLQSALLPLSVNGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHSEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDEDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDAACADGKTCTHPVMRRTGILKSVSEKRASDAYGTHSGPNGTPNVVVASKLYSRWSERHRQRETSLHLDNPHAQFHNATQQLPQESAIKFQIIPQQQQQQQQQGNHSDASNYQQQYRGANSMLATRSNLIIQQQQQYQQQQQHLNLQRFVATHNQSNQSHNHSSSSNNNSSNNSSNNNNNNTAHLNHRLQIANTTITATTREAAAAAAATTTAAATATLSASNVMDTELIENQSQQQQQLTTNANSCNKISHNSSSSKQLTAATATTTIAAAAATAQTNNELNASSNNFIYNQANASSSSSNSNTQQQQQHYYKLQQAAAAATPSSSNSQPPVEAMCMSPEHHHGSSSNSNNNNSNNNNNNNNQLTATTSSAGNTPSTSATSSTSSSLQSIIDGNQQQQITTTTTATAAAAAAATAANCDNLMSANALAELELGEQAALSNYSSSNSNSNSNSNNNQAMDAQSKASSQQHNGCANYSASTSDNSSQISASDNDSSYSVNSNNNLLNSSSNNNDEEQQQQQQQQQSADALSFFNETLDLSHEDIQRTLIANMPYNNSSNNNNSSSSTAATAAVSTAATVATCERQKPERDEEDTADVFANLDAFDMLVEFPELDLDDKQALNNTALEQEQQQQQQLQQQHASNSGYLGVATAPRKLHNICDFSPEWSYTEGGVKVLVAGPWTSDGGCYTVLFDAQPVPTVLVQEGVLRCYCPAHEAGVVTLQVACGGFLVSNAAMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDEKLQLKLENELATDHTALYLEPNFEEKLVAYCHKLMKHAWTTPSSSVTSWSVGLRGMTLLHLAAALGYAKLVGAMLNWRSENPHIILETELDALSQDVHGFTPLAWACVRGHLECTLLLYKWNHNALKIKTQAQQTPLDLANLKGHKQLLAQLCRLEKERCRKPHPRGGLANLSMNLESTAATTMTGEDSSYSIYELELQRRHDGVFLRPVAMHSNQSPPNSSSRYSKRSSIDSGINMDMRGKSSKPLARLHSNFDAHDNYALGVDSPLDSLTATNCSGLLSPLRKMDFALCEVSTGESSPIHDKDIDCDENSTSVTDATINNELNEAVVGDSDAKVLTLAEHIIAAMPERIKNEADELMVLGSPLTEPLTSESSALTDSFMDPLLDSLPNTHFDSDFSFDFHDHSYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSVSQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERTAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSQHTPSSGAGLGGASEHGGGSVSSNSQCLSSFYDNYKQDQQQQIELSSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQRERAEKEKLVHQRRAEYLQNLQYQGQQEMSVCHSDGSAGNHLQQLQPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00562457;
90% Identity
-
80% Identity
-