Basic Information

Insect: Drosophila neocordata
Gene Symbol: stc_1
Assembly: GCA_018903615.1
Location: JAEIGI010000006.1:356954-361044[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.5 1.4e+04 -3.7 0.5 15 18 382 385 381 386 0.79

2 14 2 1.9e+04 -4.1 1.6 15 19 409 413 408 413 0.81

3 14 0.048 4.6e+02 1.1 2.0 4 11 442 449 441 452 0.92

4 14 5.7e-06 0.054 13.6 16.4 4 19 456 471 454 471 0.94

5 14 0.75 7.1e+03 -2.7 0.9 5 10 496 501 496 501 0.94

6 14 5.6e-08 0.00053 20.0 13.3 1 18 507 524 507 525 0.98

7 14 4.3e-09 4.1e-05 23.6 12.5 1 19 565 583 565 583 0.98

8 14 0.0011 10 6.3 19.1 4 19 631 646 624 646 0.87

9 14 0.06 5.7e+02 0.8 11.6 1 11 686 696 686 708 0.79

10 14 2.9e-10 2.7e-06 27.3 15.1 1 18 713 730 713 731 0.97

11 14 1.7 1.6e+04 -3.9 0.9 6 10 760 764 760 765 0.81

12 14 2 1.9e+04 -5.1 13.2 9 18 777 786 767 787 0.78

13 14 3.2e-08 0.00031 20.8 14.4 1 16 823 838 823 849 0.85

14 14 2.8e-05 0.27 11.4 12.3 1 19 855 874 855 874 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.5	1.4e+04	-3.7	0.5	15	18	382	385	381	386	0.79
2	14	2	1.9e+04	-4.1	1.6	15	19	409	413	408	413	0.81
3	14	0.048	4.6e+02	1.1	2.0	4	11	442	449	441	452	0.92
4	14	5.7e-06	0.054	13.6	16.4	4	19	456	471	454	471	0.94
5	14	0.75	7.1e+03	-2.7	0.9	5	10	496	501	496	501	0.94
6	14	5.6e-08	0.00053	20.0	13.3	1	18	507	524	507	525	0.98
7	14	4.3e-09	4.1e-05	23.6	12.5	1	19	565	583	565	583	0.98
8	14	0.0011	10	6.3	19.1	4	19	631	646	624	646	0.87
9	14	0.06	5.7e+02	0.8	11.6	1	11	686	696	686	708	0.79
10	14	2.9e-10	2.7e-06	27.3	15.1	1	18	713	730	713	731	0.97
11	14	1.7	1.6e+04	-3.9	0.9	6	10	760	764	760	765	0.81
12	14	2	1.9e+04	-5.1	13.2	9	18	777	786	767	787	0.78
13	14	3.2e-08	0.00031	20.8	14.4	1	16	823	838	823	849	0.85
14	14	2.8e-05	0.27	11.4	12.3	1	19	855	874	855	874	0.96

Sequence Information

Coding Sequence: ATGGCTGAGTACTGGCAACAGCTTACGAACGGCGTAAATGGGGGAGCAGCCGCATCTGGAGCTGGTTCAAATGAATCACCTTTAGCTGATGCCAACTATGGCCATGAGGGAGCGGCTATGGAAAGCAACAGAAACAACAACAACTATGTGAATTTCAATCAGTTCATTATGCAGCATAATTTAGCTGGAGGCGGTGGTGCGCCTAATACCTCTCCCGGCGTAATGCAACCCCCATACACAATTGGCGGCGGTGGCGGAGCCTTTGGATTGACGCCTCCAGCTGTAGCTGTCGGCGGTGCTAATAATTTTGGCCAATTTTATTCACAACCATTTTATTCGCCATATCAGAATGGCGATGGTGCAACAAACGTAGCTCCTACATCATCATCCCCGTTTGTCAGCAATTATGCCAGCAGTAGCAGTAACAATGTTAACAATGCGTTTGCCCAGCTTTATACGCCTTTTGGCAACAATCCATTTGGTTTTAGTGCTTCCAAACTGCAGGCAACTGCACCCGAATTTGTGCCCCAAATGGCTAAACTGAATCTGGAGGAGCCAGCAGCAACTCCAATGACTGCAGCAAGACAAACCACAATGAACGGTAATAGCACTGCCAACCAACCGGAAACTGCCGTAACAACAGAAGCTTCACCATTGAACCAGAAATTACGTTCAGCCTTACCTCCCACCAATGATAGGGATCGGGATAGAGATCGTGATAGAGATCGCGATAGGGATCGGGATAGAGATCGAGAGCGTCCTGTTAATTCACGTCAACAACGTCGCGTTGACTATCGGGATGAGCGTGAGGATCGCTATGATCGTAGCAAAAAGCCACAGAAGCAACAACGATATGACAATCATCGTAGTAATAAGAGACGCGACGATTGGAATCGTAATCGAGATCGTATAAATGGATTTCAGCGAGCTGTTGAGGAGTTGGATACTAGTAATGAGAGTAATCAGCCATCGCCAGAGAAACACCCACAGCAGCAACAACATCAACAGCAAATTTCACCCAAGAGGGCAGCCGATAATGAGAAGCTATCGCAGCGGGAGAAACTCATCCGGGACATTGAGCAACGTCGGTTGGAGTGTTTAGTGTGTGTGGAGGCCATTAAGTCGCATCACGGCACCTGGTCATGTCAGAATTGTTATCATGTTTTACATTTGAAGTGCACCATCACATGGGCAAGCAGTTCCAAATCAGAGAATGGATGGCGTTGTCCCGCCTGTCAGAATGTCCTCCAAGAGGTGCCGCAGGAATATTTGTGTTTTTGTGGCAAATTGAAAAATCCGCCGATCAGTCGTAATGAGCTGCCACACAGTTGCGGAGAGGTCTGTTGCCGCGTTGAGGGGTGTCCGCATGCCTGCACTTTGCTGTGTCATCCAGGACCGTGTCCACCATGTCAGGCCAATGTGGAACGTAGCTGTGGATGTGGCCGCTCTAGCAAGATAATGCAGTGCTCGATGAAGAATGAAATTAAATGTAATGAAATTTGTGACAAGCTACTAAATTGCGGCGAACATCGTTGCCAGGAGGAATGCCACGAAGGCAAGTGCAAGGCATGTGCGGAGCAAGTGCAGCAGCATTGCCATTGCAGTAAACAGGAACGTTTGGTTCAATGCACCAAGGAGAACCGGGATAAACTTAGTTACTCATGCAAAGAGAGTTGTGGCAAGCCACTGCTTTGCGGTAATCACAAATGTAAGGATTCGTGTCATGCAGGCCTGTGCCGACCATGTAAATTGAGTCCTGAACAAATAACTAGTTGCCCTTGCGGCAAAATGGCTATACCTAAAGGACAACGTGGCAGTTGCCTGGATCCCGTGCCCACTTGTGAAGGCATCTGTTCAAAGACATTGCGCTGTGGCAAGCCCCAACATCCGCACCAGTGTGGCACAAAGTGTCATTTAGGGCAGTGTCCACCATGCCCCAAACAGACGGCTGTCAAGTGTCGTTGTGGCCACATGGATCAGATGATCAAATGTCGCCAGTTGTCCACCCGGGCCGATGATGCCCGTTGCAAACGTCGTTGCACTAAGAAGCGCAGTTGCGGTAAACATAAATGCAATGCGGAATGTTGCATCGATATAGATCATGCCTGTCCGTTGCCCTGCAATCGCACTCTGAGTTGCGGGCGGCATAAATGCGATCAGCCTTGTCATCGTGGCAATTGTCCACCCTGTTATCGCAGTAGTTTTGAGGAGCTCTACTGTGAATGCGGAGCTGAAGTCATCTATCCCCCGGTGCCCTGCGGCACCAAGCGTCCATTGTGCAAGCGTCCATGTTCGCGCACCCATCCTTGTGAGCATCCACCGCAGCATAATTGTCATTCGGCCACTTGTCCACCTTGCATGATGTTTACCACGAAATGGTGCCATGGCCAGCATGAGCAACGCAAAACCATTCCCTGCTCCCAGGCTAGTTTCAGTTGTGGCTTAGCCTGTGGCAAGCCTTTGCCGTGCGGTCGTCACAAATGCATCAAACCATGTCACGAAGGTCCTTGCCAAGCGGCAAATGAACAATGTCGTCAGAGTTGCCCCAAACCTCGTCCTGGATGTGGACACAAATGTGCTGCTACTTGTCATGAAGATGCCTGTCCTGAGACTCCTTGCAAGGAGATTGTCGAGGTCCAATGCGAGTGCGGACACCGCAAACAGAATCGCAGCTGCCAGGAATTGGCCAGAGAGCATAGTCGCATTGCTACCGCCCAATTGGCTTCATCCATGGCCGAAATGTCTCGTGGCAATTATATGGAACTCAGTGAAATTCTTGCACCAGCGAAAACAAGCAAGACCAACAAAACTTTGGATTGCAATGATGAATGCCGCCTGCTTGAACGCAATCGCCGACTGGCCATTGCTTTTCAATCCGGGCGTAATCCAGAAACTCAACCAAAATCGCTTACTAAATACTCTGAATTCGTGCGCAGCTTTGCCAAACGTAATCCGGCTCTGACCAAGAGTGTTTACGAGACATTGACCGATCTTGTTAAATTGGCCAAGGAGAGCAAACAGAGATCAAGAAGTCATTCGTTTCCTACCATGAATCGCGAAAAACGTCAATTGGTACATGAACTGTGCGAAATATTTAGCATTGAGTCTGTGTCCTATGACAAAGAACCCAATCGAAATGTGGTAGCTACTGCCCACAAGGATAGGTGCTGGCTACCAGCCACAAGCATTATGGAGGTGCTAAACCGTGAGTCTGGACAACGTCGTGTTCCGGTGCCTAGTAACAATGCATGGAGTTTGAAAAAGTAG
Protein Sequence: MAEYWQQLTNGVNGGAAASGAGSNESPLADANYGHEGAAMESNRNNNNYVNFNQFIMQHNLAGGGGAPNTSPGVMQPPYTIGGGGGAFGLTPPAVAVGGANNFGQFYSQPFYSPYQNGDGATNVAPTSSSPFVSNYASSSSNNVNNAFAQLYTPFGNNPFGFSASKLQATAPEFVPQMAKLNLEEPAATPMTAARQTTMNGNSTANQPETAVTTEASPLNQKLRSALPPTNDRDRDRDRDRDRDRDRDRDRERPVNSRQQRRVDYRDEREDRYDRSKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFQRAVEELDTSNESNQPSPEKHPQQQQHQQQISPKRAADNEKLSQREKLIRDIEQRRLECLVCVEAIKSHHGTWSCQNCYHVLHLKCTITWASSSKSENGWRCPACQNVLQEVPQEYLCFCGKLKNPPISRNELPHSCGEVCCRVEGCPHACTLLCHPGPCPPCQANVERSCGCGRSSKIMQCSMKNEIKCNEICDKLLNCGEHRCQEECHEGKCKACAEQVQQHCHCSKQERLVQCTKENRDKLSYSCKESCGKPLLCGNHKCKDSCHAGLCRPCKLSPEQITSCPCGKMAIPKGQRGSCLDPVPTCEGICSKTLRCGKPQHPHQCGTKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPLCKRPCSRTHPCEHPPQHNCHSATCPPCMMFTTKWCHGQHEQRKTIPCSQASFSCGLACGKPLPCGRHKCIKPCHEGPCQAANEQCRQSCPKPRPGCGHKCAATCHEDACPETPCKEIVEVQCECGHRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKTSKTNKTLDCNDECRLLERNRRLAIAFQSGRNPETQPKSLTKYSEFVRSFAKRNPALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFSIESVSYDKEPNRNVVATAHKDRCWLPATSIMEVLNRESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00600737; iTF_00501485; iTF_00591386; iTF_00578205; iTF_00484127; iTF_00571589; iTF_00524103; iTF_00612496; iTF_00503678; iTF_00618837; iTF_00555518; iTF_00604519;
90% Identity: iTF_00501485;
80% Identity: -