Basic Information

Insect: Drosophila sucinea
Gene Symbol: stc
Assembly: GCA_018150745.1
Location: JAECWP010000135.1:335774-340374[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 1.8e+04 -4.1 1.6 15 19 395 399 394 399 0.81

2 13 0.067 6.1e+02 0.6 2.5 4 11 428 435 427 436 0.92

3 13 5.6e-06 0.05 13.6 16.4 4 19 442 457 440 457 0.94

4 13 0.74 6.7e+03 -2.7 0.9 5 10 482 487 482 487 0.94

5 13 9.4e-08 0.00085 19.3 13.3 1 18 493 510 493 511 0.98

6 13 3.4e-09 3.1e-05 23.9 14.3 1 19 551 569 551 569 0.98

7 13 0.0011 9.7 6.3 19.1 4 19 617 632 610 632 0.87

8 13 0.062 5.6e+02 0.7 11.7 1 11 672 682 672 694 0.79

9 13 2.8e-10 2.6e-06 27.4 15.1 1 18 699 716 699 717 0.97

10 13 1.7 1.5e+04 -3.9 0.9 6 10 746 750 746 751 0.81

11 13 0.028 2.6e+02 1.8 14.1 9 18 763 772 753 773 0.78

12 13 5.9e-08 0.00053 20.0 15.3 1 16 809 824 809 835 0.85

13 13 1.2e-05 0.11 12.6 10.9 1 19 841 860 841 860 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	1.8e+04	-4.1	1.6	15	19	395	399	394	399	0.81
2	13	0.067	6.1e+02	0.6	2.5	4	11	428	435	427	436	0.92
3	13	5.6e-06	0.05	13.6	16.4	4	19	442	457	440	457	0.94
4	13	0.74	6.7e+03	-2.7	0.9	5	10	482	487	482	487	0.94
5	13	9.4e-08	0.00085	19.3	13.3	1	18	493	510	493	511	0.98
6	13	3.4e-09	3.1e-05	23.9	14.3	1	19	551	569	551	569	0.98
7	13	0.0011	9.7	6.3	19.1	4	19	617	632	610	632	0.87
8	13	0.062	5.6e+02	0.7	11.7	1	11	672	682	672	694	0.79
9	13	2.8e-10	2.6e-06	27.4	15.1	1	18	699	716	699	717	0.97
10	13	1.7	1.5e+04	-3.9	0.9	6	10	746	750	746	751	0.81
11	13	0.028	2.6e+02	1.8	14.1	9	18	763	772	753	773	0.78
12	13	5.9e-08	0.00053	20.0	15.3	1	16	809	824	809	835	0.85
13	13	1.2e-05	0.11	12.6	10.9	1	19	841	860	841	860	0.96

Sequence Information

Coding Sequence: ATGGCTGAGTACTGGCAACAGCTTACCAACGGTGCTCGGGGAGCAGCAGCAGCAGCCGCATCTGGAGTTGGTAGTTCGAATGAATCACCATTAACTGATAGGTATGACCATGAGGGAGCGTCAATGCCAAGCGGCAGCACTAATCACAACCACAACAACAACAACAACTACGTGAATTTCAATCAGTTCATAATGCAGCATAATTTGGGTGGCAACGGCACTCCTAATGCCGTTCCCGCTACCACTCAATATCCCTATGCAATTGGCGGCGGTGGTGGAGCCTTTGGACTGACGCCACCAATTGTAGCTGGCACATCTAATAATTTTGCCCAATTTCATCCACAGACATTTTATCCGTCATCATATCAGAATGGCGATGGCGTGGCCGCCTCTTCATCCAATGCTTTTGGCAATAATTATAGTAACAATGTTAACAATTCGTTTGGCGAGCTTTACACACCGTTCGGCAACAATCCATTTGATTTTAGTGCTTCCAAACTGCAGGCATCAGCACCCGAATTTGTGCCTCAAATGGCCAAATTGAATCTGGAAGAACCACCACCAGCAACAGCAACAACAAGAGTTACATTGAATGGTAATAGCACTGCCAGCCAGCCAGAGACTGCCATAAATACACCATCGAACCAGAAATTACGTTCAGCCTTACCGCCCACAAACGATAGAGATCGGGACAGGGATCGTGATCGGGATAGGGAAAGAGAGCGTCCTATCAACTCACGTCAACAGCGTCGTGTAGATTATCGCGATGAACGTGAGGATCGCTATGATCGTAGCAAGAAGCCACAGAAGCAACAACGTTATGACAATCATCGTAGTAATAAAAGACGCGACGATTGGAATCGTAATCGTGATCGTATAAATGGATTTCAGCGTGCTGTTGAAGAGCTAGATACCAGTAATGAGAGTAATCAACCATCACCGGAGAAACACCAGCAGCAGCAACAACAAATTTCTCCTCGCAGGGCTGCAGACAATGAAAAGCTATCGCAGCGAGAGAAACTCATAAGGGACATTGAGCAGCGTCGCTTGGAATGTTTGGTCTGTGTGGAGGCCATTAAGTCGCATCATGCCACCTGGTCATGTCAGAATTGCTATCATGTTCTACATTTAAAATGCACCATCACCTGGGCAAGTAGTTCGAAATCGGATAATGGCTGGCGTTGTCCCGCATGCCAGAATGTCCTGCAAGAGGTGCCGCAGGAATATTTGTGCTTTTGCGGCAAATTGAAAAATCCTCCAATCAGTCGCAACGAGTTGCCACACAGTTGTGGTGAGGTATGCTGCCGCATTGAGGGTTGTCCACATGCCTGTACTTTGCTATGTCATCCCGGACCCTGTCCCCCCTGTCAGGCCAATGTGGAACGCAGCTGTGGCTGTGGTCGCTCCAGCAAGATCATGCAATGCTCGATGAAAAATGAAATTAAATGTAATGAAATTTGTGACAAACTAATGAACTGTGGCGAGCATCGTTGCCAGAAGGAATGCCATGAGGGCAAGTGTGAGGCATGTGCCGAGCAAGTGCAACAGCATTGCCATTGCAGTAAACAGGAGCGTTCGGTTCAATGTACTAAAGAGAGTCGCGATAAACTTAGCTACTCATGCAAGGAGAGTTGTGGCAAGCCTCTGCTGTGCGGTAATCACAAATGTAAGGATTCCTGTCATGCCGGCCAATGTCGTCCGTGCAAGTTGAGTCCTGAGCAGATCACTAGTTGTCCCTGCGGCAAAATGCCAGTACCGAAGGGACAGCGGCTCAGTTGCCTGGACACCGTTCCCACCTGTGAGGGCATCTGTTCGAAGACTTTACGATGCGGCAAGCCCCAGCATCCGCATCAGTGTGGCACAAAATGTCACTTGGGGCAGTGTCCTCCATGTCCCAAGCAAACGGCTGTCAAATGTCGTTGCGGCCACATGGACCAGATGATCAAATGTCGCCAGTTGTCCACAAGGGCCGATGATGCCCGTTGCAAACGTCGCTGCATCAAGAAGCGCAGCTGCGGCAAACATAAATGCAATGCAGAATGTTGCATCGACATCGATCATGCCTGTCCATTGCCCTGCAATCGAACTCTCAGTTGCGGGCGGCATAAATGCGACCAGCCCTGTCATCGTGGCAATTGTCCACCCTGTTATCGTAGCAGTTTCGAGGAGCTCTACTGCGAATGCGGAGCCGAGGTTATCTATCCCCCCGTGCCCTGCGGCACTAAGCGTCCCTTGTGCAAGCGTCCCTGCTCACGCACTCATCCCTGTGAGCATCCGCCGCAGCACAATTGTCACTCGGGCACTTGTCCACCGTGCATGATGTTCACCACAAAATGGTGCCATGGCCAGCATGAGCAACGCAAAACCATTCCCTGCTCCCAAGCGAGCTTCAGCTGTGGCTTAGCCTGTGGCAAGCCCTTGCCGTGCGGTCGTCACAAATGCATCAAACCGTGTCACGAAGGGCCTTGCCAAGCGGCCGGAGAGCAATGTCGTCAGAGTTGCCCCAAACCTCGCCCTGCTTGTGGCCACAAATGTGCAGCTATATGTCATGAGGATGCCTGCCCCGAGACTCCTTGCAAGGAGGTGGTCGAGGTGCAATGCGAGTGCGGAAACCGCAAACAGAATCGCAGCTGCCAGGAATTGGCCAGGGAGCATAGTCGTATTGCCACAGCCCAATTGGCCTCATCCATGGCCGAAATGTCGCGTGGCAATTATATGGAACTCAGCGAGATTCTGGCACCAGCCAAGACTAACAAGACCAACAAAACTTTGGACTGCAACGATGAATGTCGCCTGCTGGAACGCAACCGCCGCTTGGCTATCGCTTTCCAATCCGGACGTAATCCGGAAACTCAACCGAAATCGCTAACGAAATACTCAGAATTTGTGCGCGGTTTTGCCAAGCGTAATCCAGCGCTTACGAAAAGTGTGTATGAGACATTGACAGATCTGGTTAAATTGGCCAAGGAGAGCAAACAGAGATCGAGAAGTCACTCGTTTCCCACCATGAATCGCGAAAAACGTCAGCTAGTGCATGAGCTGTGCGAGATATTTGGCATTGAGTCGGTGTCCTATGACAAGGAACCCAATCGGAATGTGGTAGCCACTGCCCACAAAGATAGATGCTGGCTTCCAGCCACAAGCATTATGGAGGTGCTGAACCGTGAGTCTGGACAACGTCGTGTTCCCGTGCCTAGTAACAATGCATGGAGTTTGAAAAAGTAG
Protein Sequence: MAEYWQQLTNGARGAAAAAASGVGSSNESPLTDRYDHEGASMPSGSTNHNHNNNNNYVNFNQFIMQHNLGGNGTPNAVPATTQYPYAIGGGGGAFGLTPPIVAGTSNNFAQFHPQTFYPSSYQNGDGVAASSSNAFGNNYSNNVNNSFGELYTPFGNNPFDFSASKLQASAPEFVPQMAKLNLEEPPPATATTRVTLNGNSTASQPETAINTPSNQKLRSALPPTNDRDRDRDRDRDRERERPINSRQQRRVDYRDEREDRYDRSKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFQRAVEELDTSNESNQPSPEKHQQQQQQISPRRAADNEKLSQREKLIRDIEQRRLECLVCVEAIKSHHATWSCQNCYHVLHLKCTITWASSSKSDNGWRCPACQNVLQEVPQEYLCFCGKLKNPPISRNELPHSCGEVCCRIEGCPHACTLLCHPGPCPPCQANVERSCGCGRSSKIMQCSMKNEIKCNEICDKLMNCGEHRCQKECHEGKCEACAEQVQQHCHCSKQERSVQCTKESRDKLSYSCKESCGKPLLCGNHKCKDSCHAGQCRPCKLSPEQITSCPCGKMPVPKGQRLSCLDTVPTCEGICSKTLRCGKPQHPHQCGTKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCIKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPLCKRPCSRTHPCEHPPQHNCHSGTCPPCMMFTTKWCHGQHEQRKTIPCSQASFSCGLACGKPLPCGRHKCIKPCHEGPCQAAGEQCRQSCPKPRPACGHKCAAICHEDACPETPCKEVVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKTNKTNKTLDCNDECRLLERNRRLAIAFQSGRNPETQPKSLTKYSEFVRGFAKRNPALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKDRCWLPATSIMEVLNRESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00556252;
90% Identity: iTF_00618837;
80% Identity: -