Basic Information

Insect: Drosophila emarginata
Gene Symbol: stc
Assembly: GCA_037075365.1
Location: JBAMCD010000109.1:326798-330642[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.5 1.7e+04 -3.7 0.5 15 18 375 378 374 379 0.79

2 13 2 2.3e+04 -4.1 1.6 15 19 402 406 401 406 0.81

3 13 0.068 7.9e+02 0.6 2.5 4 11 435 442 434 443 0.92

4 13 5.6e-06 0.066 13.6 16.4 4 19 449 464 447 464 0.94

5 13 0.74 8.7e+03 -2.7 0.9 5 10 489 494 489 494 0.94

6 13 1.1e-06 0.013 15.9 11.9 1 18 500 517 500 518 0.92

7 13 3.4e-09 4e-05 23.9 14.3 1 19 558 576 558 576 0.98

8 13 0.0011 13 6.3 19.1 4 19 624 639 617 639 0.87

9 13 0.06 7e+02 0.8 11.6 1 11 679 689 679 701 0.79

10 13 2.8e-10 3.3e-06 27.4 15.1 1 18 706 723 706 724 0.97

11 13 2 2.3e+04 -6.6 14.8 9 18 770 779 757 780 0.77

12 13 3.2e-08 0.00038 20.8 14.4 1 16 816 831 816 842 0.85

13 13 1.2e-05 0.14 12.5 10.9 1 19 848 867 848 867 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.5	1.7e+04	-3.7	0.5	15	18	375	378	374	379	0.79
2	13	2	2.3e+04	-4.1	1.6	15	19	402	406	401	406	0.81
3	13	0.068	7.9e+02	0.6	2.5	4	11	435	442	434	443	0.92
4	13	5.6e-06	0.066	13.6	16.4	4	19	449	464	447	464	0.94
5	13	0.74	8.7e+03	-2.7	0.9	5	10	489	494	489	494	0.94
6	13	1.1e-06	0.013	15.9	11.9	1	18	500	517	500	518	0.92
7	13	3.4e-09	4e-05	23.9	14.3	1	19	558	576	558	576	0.98
8	13	0.0011	13	6.3	19.1	4	19	624	639	617	639	0.87
9	13	0.06	7e+02	0.8	11.6	1	11	679	689	679	701	0.79
10	13	2.8e-10	3.3e-06	27.4	15.1	1	18	706	723	706	724	0.97
11	13	2	2.3e+04	-6.6	14.8	9	18	770	779	757	780	0.77
12	13	3.2e-08	0.00038	20.8	14.4	1	16	816	831	816	842	0.85
13	13	1.2e-05	0.14	12.5	10.9	1	19	848	867	848	867	0.96

Sequence Information

Coding Sequence: ATGGCTGAATACTGGCAACAGCTTACTAACGGGGTCAGTGGCGGAGCAGCCGCATCTGGAGCTGGTTCCAATGAATCACCTTTAACTGCTACCAGCTATGGCCATGAGGGAGCGGCTATGTCAagcaacactaacaacaacaacaactatgtgAATTTCAATCAATTCATAATGCAGCATAATTTAGGTGGTAGCAATGGTGCACCTAATTCCTCTCCCGCCATAATGCAACCTGCTTATACAATTGGCGGGGGTGGCGGAGCCTTTGGATTGACACCATCAGTTATTGCTTCCAATAGTTTTGGCCAATTTTATAATACGCAACCATTTTATTCGTCACATCAGAATGGCGATGGTGGAACTAATATAGCCCCCACATCATCATCCCCGTTTGCCAGCAATTATGCCAGCAGTAGCAGTAACAATGTTAACAATGCGTTTGCCCAGCTTTATACACCTTTTGGCAACAATCCATTTGGTTTTAGTGCTTCCAAACTGCAGGCAACTGCACCCGAATTTGTACcacaaatggcaaaattaaATCTGGATGAGCCACCAGAAACTCCAATAACTGCAGCAAGACAACCAACAATGAACGGTAATAGCACTGCCAATCAACAGGAAACTGCCATAAGTACAGAAGCTTCACCATTGAACCAGAAATTACGTTCAGCCTTACCACCCACCAACGATAGGGATCGGGATAGAGATCGTGATAGAGATCGGGATAGAGAGCGTCCTATTAACTCACGTCAGCAACGTCGCGTTGACTATCGTGATGAGCGTGAAGATCGCTATGATCGTAGCAAAAAGCCACAGAAGCAACAACGTTATGACAATCATCGTAGTAATAAGAGGCGTGACGATTGGAATCGTAATCGAGATCGTATAAATGGTTTTCAGCGAGCTGTTGAGGAGCTAGATACTAGTAATGAGAGTAATCAACCATCACCAGAGAAACatccacagcagcaacaacatcaacaacaaatttcCCCCAAGAGGGGAGCCGATAATGAGAAACTATCGCAAAGGGAGAAACTAATCCGTGACATTGAACAACGTCGCTTGGAGTGTTTGGTCTGTGTGGAGGCCATTAAATCGCATCATGGCACCTGGTCATGTCAGAATTGTTATCATGTTTTACATTTAAAGTGCACCATTACATGGGCAAGTAGTTCCAAATCGGACAATGGATGGCGTTGTCCAGCCTGTCAGAATGTCCTGCAAGAGGTGCCGCAAgaatatttgtgtttttgtggCAAATTAAAGAATCCCCCAATCAGTCGTAACGAGTTGCCACACAGTTGTGGAGAGGTCTGCTGCCGCATTGAAGGATGTCCGCATGCATGCACTTTGCTATGTCATCCAGGACCGTGTCCACCATGTCAGGCCAATGTGGAGCGAAGCTGTGGATGTGGACGCTCTAGCAAGATTATGCAATGCTcgatgaaaaatgaaataaaatgtaatgaaatttGTGACAAGTTAATGAATTGTGACGAGCATCGTTGCCAGGAGAAATGCCACGAAGGCAAGTGTAAGGCGTGTGCGGAGCAAGTGCAGCAGCATTGTCATTGCAGTAAACAGGAACGTTTGGTTCAATGCACCAAGGAGAATCGGGATAAGCTTAGCTACTCATGCAAGGAGAGTTGTGGCAAGCCACTGCTGTGCGGTAATCACAAATGCAAGGATTCGTGTCATGCAGGCCAATGTCGTCCCTGTAAATTGAGTCCTGAACAAATAACTAGTTGCCCATGCGGCAAAATGGCTGTACCTAAGGGACAACGTGTCAGTTGCCTCGATCCTGTGCCAACCTGTGAAGGCATCTGTTCGAAGACATTGCGTTGCGGCAAGCCCCAACATCCGCATCAGTGTGGCACAAAGTGTCATTTGGGTCAGTGTCCACCGTGCCCCAAACAGACAGCTGTTAAGTGTCGTTGCGGTCACATGGATCAGATGATCAAATGCCGCCAGTTGTCAACACGGGCCGATGATGCCCGTTGCAAACGTCGGTGCACCAAGAAGCGCAGCTGTGGCAAACATAAATGCAATGCGGAATGTTGCATCGATATAGATCATGCCTGTCCTTTGCCCTGTAATCGTACTCTGAGCTGCGGGCGGCATAAATGCGATCAGCCCTGTCATCGTGGCAATTGTCCACCCTGTTATCGCAGTAGTTTTGAGGAGCTCTACTGTGAATGCGGAGCCGAAGTTATCTATCCTCCGGTGCCCTGTGGTACCAAGCGTCCCTTGTGCAAGCGTCCATGTTCGCGTAGTCATCCTTGTGAGCATCCGCCACAGCATAATTGCCATTCGGCCACCTGTCCGCCCTGCATGATGTTTACCACAAAATGGTGCCATGGCCAGCATGAGCAACGCAAAACCATTCCCTGCTCTCAGGCTAGTTTCAGTTGTGGCTTAGCCTGTGGCAAGCCATTGCCATGTGGTCGCCATAAATGCATCAAACCATGTCACGAAGGACCTTGCCAAGCGGCAAATGAGCAATGTCGTCAGAGTTGCCCAAAACCTCGTCCCGTATGTGGCCACAAATGTGCAGCTATTTGTCATGAAGATGCCTGTCCCGAGACCCCTTGCAAGGAGGTTGTCGAGGTCCAATGCGAGTGCGGACACCGCAAACAAAATCGCAGCTGCCAGGAATTGGCCAGGGAGCATAGTCGGATTGCTACCGCCCAATTGGCCTCATCAATGGCAGAAATGTCTCGTGGCAATTACATGGAACTCAGTGAAATTCTCGCACCAGCGAAGACCAATAAGACCAATAAAAcTTTGGATTGCAATGATGAATGTCGCCTGCTTGAACGCAATCGCCGCTTGGCCATAGCTTTTCAATCTGGTCGTAATCCAGAAACTCAACCAAAATCGCTAACTAAATATTCTGAATTTGTGCGCGGCTTTGCCAAACGTAATCCGGCTTTGACCAAGAGTGTTTACGAAACATTGACCGATCTGGTTAAATTGGCCAAGGAAAGCAAGCAGAGATCAAGAAGTCATTCGTTTCCAACCATGAATCGGGAGAAACGTCAGTTGGTGCATGAACTGTGCGAGATATTCGGCATAGAGTCGGTGTCGTATGACAAAGAACCCAATCGAAATGTGGTAGCCACTGCCCACAAAGATAGAtgTTGGCTACCAGCCACTAGCATTATGGAGGTGCTGAATCGTGAGTCTGGACAACGTCGTGTTCCGGTGCCTAGTAACAATGCATGGAGTTTAAAAAAGTAG
Protein Sequence: MAEYWQQLTNGVSGGAAASGAGSNESPLTATSYGHEGAAMSSNTNNNNNYVNFNQFIMQHNLGGSNGAPNSSPAIMQPAYTIGGGGGAFGLTPSVIASNSFGQFYNTQPFYSSHQNGDGGTNIAPTSSSPFASNYASSSSNNVNNAFAQLYTPFGNNPFGFSASKLQATAPEFVPQMAKLNLDEPPETPITAARQPTMNGNSTANQQETAISTEASPLNQKLRSALPPTNDRDRDRDRDRDRDRERPINSRQQRRVDYRDEREDRYDRSKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFQRAVEELDTSNESNQPSPEKHPQQQQHQQQISPKRGADNEKLSQREKLIRDIEQRRLECLVCVEAIKSHHGTWSCQNCYHVLHLKCTITWASSSKSDNGWRCPACQNVLQEVPQEYLCFCGKLKNPPISRNELPHSCGEVCCRIEGCPHACTLLCHPGPCPPCQANVERSCGCGRSSKIMQCSMKNEIKCNEICDKLMNCDEHRCQEKCHEGKCKACAEQVQQHCHCSKQERLVQCTKENRDKLSYSCKESCGKPLLCGNHKCKDSCHAGQCRPCKLSPEQITSCPCGKMAVPKGQRVSCLDPVPTCEGICSKTLRCGKPQHPHQCGTKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPLCKRPCSRSHPCEHPPQHNCHSATCPPCMMFTTKWCHGQHEQRKTIPCSQASFSCGLACGKPLPCGRHKCIKPCHEGPCQAANEQCRQSCPKPRPVCGHKCAAICHEDACPETPCKEVVEVQCECGHRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKTNKTNKTLDCNDECRLLERNRRLAIAFQSGRNPETQPKSLTKYSEFVRGFAKRNPALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKDRCWLPATSIMEVLNRESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00556252;
90% Identity: iTF_00556252; iTF_00484127; iTF_00578205; iTF_00591386;
80% Identity: -