Dstu008098.1
Basic Information
- Insect
- Drosophila sturtevanti
- Gene Symbol
- stc
- Assembly
- GCA_018150375.1
- Location
- JAECWJ010000165.1:7598-14812[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.4 1.1e+04 -3.6 0.5 15 18 305 308 304 309 0.79 2 14 1.9 1.6e+04 -4.0 1.6 15 19 332 336 331 336 0.81 3 14 0.044 3.7e+02 1.2 2.0 4 11 365 372 364 375 0.92 4 14 5.2e-06 0.044 13.7 16.4 4 19 379 394 377 394 0.93 5 14 0.69 5.8e+03 -2.6 0.9 5 10 419 424 419 424 0.94 6 14 5.1e-08 0.00043 20.1 13.3 1 18 430 447 430 448 0.98 7 14 3.2e-09 2.7e-05 24.0 14.3 1 19 488 506 488 506 0.98 8 14 0.001 8.5 6.4 19.1 4 19 554 569 547 569 0.87 9 14 0.055 4.7e+02 0.9 11.6 1 11 609 619 609 631 0.79 10 14 2.6e-10 2.2e-06 27.5 15.1 1 18 636 653 636 654 0.97 11 14 1.6 1.3e+04 -3.8 0.9 6 10 683 687 683 688 0.81 12 14 2 1.7e+04 -5.0 13.2 9 18 700 709 690 710 0.78 13 14 3e-08 0.00025 20.9 14.4 1 16 746 761 746 772 0.85 14 14 1.1e-05 0.097 12.6 10.9 1 19 778 797 778 797 0.96
Sequence Information
- Coding Sequence
- ATGGCTGAATACTGGCAACAGCTTACTAACGGCATTAATGGCGGAGCAGTCGCATCTGGAGCTGGTTCCAATGAATCAGCTTTAACTGCTGCCAGCTATGGCCATGAGGGAGCGGCTATGCCAACTAACACTAATAACAACAACAACTATGTGAACTTCAATCAGTTCATTATGCAGCATAATTTAGGTGGTGGTGGTGGTGGTAATGGCACACCTAATGCCTCTCCCGCCATAATGCAACCACCTTACACAATTGGCGGCGGTGGCGGAGCCTTTGGACTGACACCGCCACCTGCAGCTCCCAATAGTTTTGGACCATTTTATTCACAACAATTTTATGCGTCCTATCAGAATGGCGATGGTTCAACTAATAACATAGCCCCCACTTCATCATCCTCGTTTGTTGGAAATTATGCCAGCGGTAGCAGTAATAATGTTAACAATGCGTTTGCCCAGCTTTATACGCCTTTTGGCAACAATCCATTTGGATTTAGTGCTTCCAAACTGCAGGCAACTGCACCCGAATTTCAACGTCGTGTTGATTATCGGGATGAACGTGAGGATCGCTATGATCGCAGTAAAAAGCCACAGAAGCAACAACGATATGACAATCATCGTAGTAATAAAAGACGCGACGATTGGAATCGTAATCGAGATCGTATAAATGGATTTCAGCGTGCCGTTGAGGAGCTGGACACTAGTAATGAGAGCAATCAACCATCGCCAGAGAAACATCCACAGCAGCAACAGCAACAACATCAACAACATCATCAACATCAAATATCCCCCAAAAGGGCAGCCGATAATGAGAAGCTATCGCAGCGAGAGAAACTCATTCGTGACATTGAGCAACGTCGATTGGAGTGTTTGGTGTGTGTGGAGGCCATTAAGTCGCATCATGGCACCTGGTCATGTCAGAATTGCTATCACGTTTTACATTTGAAGTGTACCATAACATGGGCAAGTAGTTCCAAATCGGATAATGGATGGCGTTGTCCCGCCTGTCAAAATGTTCTGCAAGAGGTGCCGCAGGAATATTTGTGTTTTTGTGGCAAATTGAAAAATCCTCCAATCAGTCGGAATGAATTGCCACACAGTTGTGGGGAGGTCTGTTGTCGCGTTGAAGGCTGTCCACATGCCTGCACTTTGCTCTGTCATCCGGGACCGTGTCCACCATGTCAGGCCAATGTGGAGCGTAGCTGTGGATGTGGTCGCTCTAGCAAGATAATGCAATGCTCGATGAAAACTGAAATTAAATGCAATGAAATTTGTGACAAGTTGTTGAATTGTGGCGAACATCGTTGCCAGGAGGAATGTCACGAAGGCAAATGTAAGGCATGTGCGGAGCAAGTGCAGCAGCATTGCCATTGCAGTAAACAGGAACGTTTGGTCCAATGCACCAAGGAAAATCGAGATAAACTGAGCTACTCATGCAAGGAGAGTTGTGGCAAACCATTGCTGTGCGGTAATCATAAATGCAAGGATTCGTGTCATGCAGGACAATGCCGACCATGTAAATTGAGTCCTGAACAAATAACAAGTTGCCCCTGTGGAAAAATGGTTGTACCCAAGGGACAACGTGTCAGTTGCCTAGATCCTGTGCCCACCTGTGAGGGAATCTGTTCAAAGACATTGCGTTGCGGCAAGCCCCAACATCCGCATCAGTGTGGGACAAAGTGTCATTTGGGTCAGTGTCCACCATGCCCCAAACAGACGGCTGTTAAGTGTCGTTGTGGGCACATGGATCAAATGATCAAATGCCGTCAATTGTCCACACGGGCCGATGATGCCCGTTGCAAACGTCGTTGCACCAAAAAACGCAGCTGTGGCAAACATAAATGTAATGCAGAATGTTGCATCGATATAGATCATGCTTGCCCCTTGCCCTGCAATCGTACTCTGAGCTGCGGGCGGCATAAATGCGATCAACCATGTCATCGTGGCAATTGTCCACCATGTTATCGCAGTAGTTTTGAGGAGCTCTACTGTGAATGCGGAGCAGAGGTTATCTATCCCCCAGTACCCTGCGGCACTAAGCGTCCCTTGTGCAAGCGCCCTTGTTCGCGTACTCATCCCTGTGAGCATCCGCCTCAACATAATTGCCATTCGGCCACTTGTCCACCTTGCATGATGTTTACCACAAAATGGTGCCATGGCCAGCATGAGCAACGCAAAACCATTCCCTGCTCCCAGGCTAGTTTCAGTTGTGGCTTAGCATGTGGCAAGCCCTTGACTTGCGGTCGTCACAAATGCATCAAACCATGTCACGAAGGGCCATGCCAAGCGGCAAATGAGCAATGTCGTCAGAGTTGCCCCAAACCACGTCCTGGATGTGGCCACAAATGTGCAGCTATTTGTCATGAAGATGCCTGTCCCGAGACCCCATGCAAGGAGCTCGTGGAGGTGCAATGCGAGTGCGGACACCGTAAACAGAATCGCAGCTGCCAGGAATTGGCCAGGGAACACAGTCGAATTGCCACCGCTCAATTGGCCTCATCCATGGCGGAAATGTCTCGTGGCAACTATATGGAACTCAGCGAAATTCTCGCACCAGCGAAAACAAGCAAAACCAACAAAACTTTGGATTGCAATGATGAATGTCGCCTGCTTGAACGCAATCGCCGTTTGGCTATAGCTTTTCAATCTGGACGTAATCCAGAAACTCAACCAAAATCGCTTACCAAATACTCTGAATTTGTGCGAGGTTTTGCCAAACGTAATCCTGCTCTAACCAAGAGTGTATATGAGACATTAACCGATCTGGTTAAATTGGCCAAGGAGAGCAAACAAAGATCACGGAGTCATTCGTTTCCTACCATGAATCGGGAGAAACGTCAGTTGGTGCATGAACTATGCGAAATATTTGGCATTGAATCGGTGTCCTATGACAAGGAACCCAATCGCAATGTGGTAGCCACTGCCCACAAAGAAAGATGCTGGCTACCAGCCACAAGCATTATGGAGGTGCTGAATCGTGAGTCTGGACAACGTCGTGTTCCGGTGCCTAGTAACAATGCATGGAGTTTAAAAAAGTAG
- Protein Sequence
- MAEYWQQLTNGINGGAVASGAGSNESALTAASYGHEGAAMPTNTNNNNNYVNFNQFIMQHNLGGGGGGNGTPNASPAIMQPPYTIGGGGGAFGLTPPPAAPNSFGPFYSQQFYASYQNGDGSTNNIAPTSSSSFVGNYASGSSNNVNNAFAQLYTPFGNNPFGFSASKLQATAPEFQRRVDYRDEREDRYDRSKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFQRAVEELDTSNESNQPSPEKHPQQQQQQHQQHHQHQISPKRAADNEKLSQREKLIRDIEQRRLECLVCVEAIKSHHGTWSCQNCYHVLHLKCTITWASSSKSDNGWRCPACQNVLQEVPQEYLCFCGKLKNPPISRNELPHSCGEVCCRVEGCPHACTLLCHPGPCPPCQANVERSCGCGRSSKIMQCSMKTEIKCNEICDKLLNCGEHRCQEECHEGKCKACAEQVQQHCHCSKQERLVQCTKENRDKLSYSCKESCGKPLLCGNHKCKDSCHAGQCRPCKLSPEQITSCPCGKMVVPKGQRVSCLDPVPTCEGICSKTLRCGKPQHPHQCGTKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPLCKRPCSRTHPCEHPPQHNCHSATCPPCMMFTTKWCHGQHEQRKTIPCSQASFSCGLACGKPLTCGRHKCIKPCHEGPCQAANEQCRQSCPKPRPGCGHKCAAICHEDACPETPCKELVEVQCECGHRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKTSKTNKTLDCNDECRLLERNRRLAIAFQSGRNPETQPKSLTKYSEFVRGFAKRNPALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLNRESGQRRVPVPSNNAWSLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00556252;
- 90% Identity
- -
- 80% Identity
- -