Basic Information

Insect: Drosophila tropicalis
Gene Symbol: stc
Assembly: GCA_018151085.1
Location: JAECWH010000378.1:2426182-2429699[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 1.8e+04 -4.1 1.6 15 19 413 417 412 417 0.81

2 13 0.068 6.3e+02 0.6 2.5 4 11 446 453 445 454 0.92

3 13 5.7e-06 0.052 13.6 16.4 4 19 460 475 458 475 0.94

4 13 0.75 6.9e+03 -2.8 0.9 5 10 500 505 500 505 0.94

5 13 9.6e-08 0.00088 19.3 13.3 1 18 511 528 511 529 0.98

6 13 2 1.8e+04 -6.3 3.9 7 13 533 539 533 540 0.74

7 13 1e-08 9.3e-05 22.4 13.9 1 19 569 587 569 587 0.98

8 13 0.0011 10 6.3 19.1 4 19 635 650 628 650 0.87

9 13 0.084 7.8e+02 0.3 12.5 1 11 690 700 690 712 0.79

10 13 2.9e-10 2.7e-06 27.3 15.1 1 18 717 734 717 735 0.97

11 13 2 1.8e+04 -6.7 15.0 9 18 781 790 768 791 0.77

12 13 6e-08 0.00055 19.9 15.3 1 16 827 842 827 853 0.85

13 13 8.8e-06 0.081 13.0 11.5 1 19 859 878 859 878 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	1.8e+04	-4.1	1.6	15	19	413	417	412	417	0.81
2	13	0.068	6.3e+02	0.6	2.5	4	11	446	453	445	454	0.92
3	13	5.7e-06	0.052	13.6	16.4	4	19	460	475	458	475	0.94
4	13	0.75	6.9e+03	-2.8	0.9	5	10	500	505	500	505	0.94
5	13	9.6e-08	0.00088	19.3	13.3	1	18	511	528	511	529	0.98
6	13	2	1.8e+04	-6.3	3.9	7	13	533	539	533	540	0.74
7	13	1e-08	9.3e-05	22.4	13.9	1	19	569	587	569	587	0.98
8	13	0.0011	10	6.3	19.1	4	19	635	650	628	650	0.87
9	13	0.084	7.8e+02	0.3	12.5	1	11	690	700	690	712	0.79
10	13	2.9e-10	2.7e-06	27.3	15.1	1	18	717	734	717	735	0.97
11	13	2	1.8e+04	-6.7	15.0	9	18	781	790	768	791	0.77
12	13	6e-08	0.00055	19.9	15.3	1	16	827	842	827	853	0.85
13	13	8.8e-06	0.081	13.0	11.5	1	19	859	878	859	878	0.96

Sequence Information

Coding Sequence: ATGGCTGAATACTGGCAACAAATCACCAATGGTGCTCGAGGAGGAGCCACCGCCGCATCCGGAGTTGGTGGTGGTTCGAATGAATCACCATTATTAACTGATAGCTATGGCCATGAGGGAGCGTCAATGTCAAGCGGCAGCACCCATCATAATCATAATCACAATAACAACAACTATGTGAATTTTAATCAGTTCATAATGCAACATAATTTGGGAGGTGGAGGAGGGGCTCCTAATGCCGTTCCCGCCACTATACAATATCCTCCGTACGCAATTGGTGGCGGTGGCGGAGCCTTTGGACTGACACCTCCGATGGCTGTATCCAATAATTTTGGACAATTCCATCCACAGCCATTTTATCCATCATATCAGAATGGCGATGGCATTGCCCCATCATCATCATCATCAACCGGATCCAATGCCGCCGCGTTTGGCAACAATTATAGTAACAATGTTAATCAAACATTTGCCGATCTTTATACTCCATTTGGCAACAATCCCTTCGATTTTAGTGCTTCCAAACTGCAGGCAACAGCACCCGAATTTGTGCCACAAATGGCCAAATTAAATCTGGAGGAGACAGCTCCAGCAACAACTACATCTACGAGAGCAACAATGAATGGTAATAGCACTGCCAGCCAGCCAGAAACTGCCATACAGAATACAGAAGGAACGTCTTCACCATTGAGCCAGAAATCACGTTCAGCCTTACCACCACAGCCGCCACCGCAGGCGCTTACGAACGATAGAGATCGTGACAGGGATAGGGAACGGGGAGATCGAGATCGGGATCGGGATAGAGAGCGTCCTATTAATTCACGTCAGCAGCGTCGTGTGGATTATCGCGACGAGCGTGAAGATCGCTATGATCGTAGTAGCAAAAAGCCACAGAAGCAACAACGTTATGACAATCATCGTAGTAATAAAAGACGCGACGATTGGAATCGTAATCGTGATCGTATAAATGGTTTTCAACGGGCAGTCGAAGAGTTGGATACCACAGCAACAACAACAGCAGAACAAATTTCCCCTCGAAGGGCAGCTGATAATGAGAAGCTATCACAGCGAGAGAAATTGATCCGTGACATTGAGCAACGTCGCTTAGAATGTTTGGTCTGTGTGGAGGCCATTAAATCGCATCATGCCACATGGTCATGTCAGAATTGCTATCATGTGTTACATTTAAAGTGTACCATCACCTGGGCCAGCAGTTCCAAAGCGGATAATGGTTGGCGTTGTCCAGCCTGTCAGAATGTGCTGCAAGAAGTGCCCCAGGAATATTTATGCTTTTGCGGCAAACTAAAGAATCCTCCCATCAGTCGTAATGAGCTGCCCCATAGTTGTGGTGAGGTTTGCTGTCGCATTGAGGGTTGTCCACATGCCTGTACTTTGCTGTGTCATCCCGGCCCGTGTCCCCCGTGTCAGGCCAATGTGGAACGTAGCTGCGGCTGTGGCCGTTCCAGCAAAATCATGCAATGTTCGATGAAAACTGAAATTAAATGTAATGAAATATGCGACAAGCTGATGAATTGTGGCGAACATCGTTGTCAGAAGGAGTGCCATGAGGGCAAATGTGAGGCATGCGCGGAGCAAGTGGAACAGCATTGTCATTGCGGGAAACAAGAGCGAACGGTTCAATGTACCAAGGAGAATCGCGATAAGCTAAGCTACTCATGCAAAGAGAGTTGTGGCAAACCATTGCTTTGTGGGAATCACAAATGCAGGGATTCGTGTCATGCGGGCCAATGCCGTCCCTGTAAGCTGAGTCCCGAACAAATCACTAGTTGTCCTTGCGGCAAAATGCCTGTACCGAGCGGACAACGCACCAGCTGTCTGGACACTGTACCCACTTGTGAAGGCATCTGTTCGAAAACTTTGCGTTGCGGCAAACCACAACATCCGCATCAATGTGGCACCAAGTGTCATTTGGGCCAATGTCCGCCATGCCCCAAGCAAACGGCTGTGAAATGTCGTTGTGGTCACATGGACCAGATGATCAAATGCCGACAGCTGTCCACCCGTGCCGATGATGCCCGTTGCAAGCGACGCTGCGTCAAGAAACGCAGCTGTGGCAAACATAAATGCAATTCGGAATGTTGCATAGACATTGATCATGCCTGCCCGTTGCCCTGCAATCGCACTCTCAGCTGCGGTCGGCATAAATGCGATCAGCCCTGTCATCGTGGCAATTGCCCGCCGTGCTATCGTAGTAGTTTCGAGGAGCTCTATTGTGAATGCGGTGCCGAGGTTATTTATCCCCCAGTGCCCTGCGGCACTAAGCGTCCCATGTGCAAGCGTCCTTGCTCGCGCAGTCATCCCTGTGAGCATCCGCCGCAGCATAATTGCCATTCGGCCACTTGTCCGCCTTGCATGATATTCACCACAAAATGGTGTCATGGCCAGCATGAGCAACGCAAAACCATTCCCTGCTCTCAGGCTAGCTTTAGCTGTGGGTTGGCCTGTGGCAAGCCATTGCCGTGCGGCCGTCACAAATGCATCAAGCCGTGTCACGAAGGCCCATGCCAAGCAGCTGGCGAACAATGTCGTCAGAGCTGCCCTAAACCTCGTCCGGGATGTGGCCACAAATGTGCAGCCGTTTGCCATGAAGATGCCTGCCCTGAGACGCCATGCAAAGAGCTTGTCGAAGTGCAATGCGAATGCGGTAATCGCAAACAGAATCGCAGTTGCCAAGAGCTAGCCAGGGAGCACAGTCGTATTGCAACCGCTCAGTTGGCCTCATCCATGGCCGAAATGTCGCGTGGCAATTACATGGAACTCAGCGAAATTCTTGCACCAGCCAAGACCAGCAAAACCAATAAAACTTTGGATTGCAATGATGAATGTCGTCTGCTTGAACGCAATCGCCGCCTGGCCATTGCTTTTCAATCTGGACGCAATTCAGAAACCCAACCGAAATCGCTTACAAAATACTCGGAATTTGTGCGAGGTTTTGCCAAACGTAATCCAGCGCTTACAAAAAGTGTGTACGAGACATTGACCGATTTGGTTAAATTGGCCAAGGAGAGCAAACAGAGATCAAGAAGTCACTCCTTCCCCACCATGAATCGTGAGAAGCGTCAGCTAGTGCATGAGCTATGTGAAATATTTGGCATTGAATCGGTATCCTATGACAAGGAACCCAATCGCAATGTTGTGGCCACTGCCCACAAAGATAGATGCTGGCTTCCAGCCACAAGCATTATGGAGGTGCTCAACCGTGAGTCTGGACAACGTCGTGTTCCTGTGCCTAGTAACAATGCATGGAGTCTGAAAAAGTAG
Protein Sequence: MAEYWQQITNGARGGATAASGVGGGSNESPLLTDSYGHEGASMSSGSTHHNHNHNNNNYVNFNQFIMQHNLGGGGGAPNAVPATIQYPPYAIGGGGGAFGLTPPMAVSNNFGQFHPQPFYPSYQNGDGIAPSSSSSTGSNAAAFGNNYSNNVNQTFADLYTPFGNNPFDFSASKLQATAPEFVPQMAKLNLEETAPATTTSTRATMNGNSTASQPETAIQNTEGTSSPLSQKSRSALPPQPPPQALTNDRDRDRDRERGDRDRDRDRERPINSRQQRRVDYRDEREDRYDRSSKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFQRAVEELDTTATTTAEQISPRRAADNEKLSQREKLIRDIEQRRLECLVCVEAIKSHHATWSCQNCYHVLHLKCTITWASSSKADNGWRCPACQNVLQEVPQEYLCFCGKLKNPPISRNELPHSCGEVCCRIEGCPHACTLLCHPGPCPPCQANVERSCGCGRSSKIMQCSMKTEIKCNEICDKLMNCGEHRCQKECHEGKCEACAEQVEQHCHCGKQERTVQCTKENRDKLSYSCKESCGKPLLCGNHKCRDSCHAGQCRPCKLSPEQITSCPCGKMPVPSGQRTSCLDTVPTCEGICSKTLRCGKPQHPHQCGTKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCVKKRSCGKHKCNSECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPMCKRPCSRSHPCEHPPQHNCHSATCPPCMIFTTKWCHGQHEQRKTIPCSQASFSCGLACGKPLPCGRHKCIKPCHEGPCQAAGEQCRQSCPKPRPGCGHKCAAVCHEDACPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKTSKTNKTLDCNDECRLLERNRRLAIAFQSGRNSETQPKSLTKYSEFVRGFAKRNPALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKDRCWLPATSIMEVLNRESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00556252;
90% Identity: iTF_00618837;
80% Identity: -