Dmon010535.1
Basic Information
- Insect
- Drosophila monieri
- Gene Symbol
- fru
- Assembly
- GCA_035047585.1
- Location
- JAWNPJ010000082.1:1356233-1358263[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.4e-12 1.1e-08 34.8 0.1 1 44 381 424 381 425 0.91
Sequence Information
- Coding Sequence
- ATGGGCGGCCCCACGGCGCCTGTAGCCAGCAGCGGCGGAGGTCCGGCGGAGGTGGGCCAGACCTACTGCCTTCGGTGGAACAACCACCAGACCAACCTGGTCCAGATCCTGCACGCCCTGCACGAGGTGGGCAGCTATGTCGACTGCACCCTGGTGGTGGACGACGAACAGTTCCAGGCCCATCGCGTGGTCCTGGCTGCCAATTCGCCGTATTTCCAGCACATCCTCCGGGACGTGCCGCAGGATCACTGCAGCATCATTCTGCCAGGGGTGAAGGGCTTCGAGATCGCCGCCCTGCTCCAGTACATGTACACTGGCGAGACGACCGTTACCAAGAGCCAGGAGCCGGAGATCCTGCGCACCGCCAAGGAGCTGCAGGTCAAGGGCTTGTACGACAACCTCATGAAGTTCAACCACCAGGccagtgccacgcccacatcCAGCTCCGGCGCGTTAGGGGGCAAGCCCTTGAACGGCTCAGCCTCGCAGCACCAGCACTCCTCGTCCGTGATCTCCACATCCACCCACATCTCGCCCAGTGCCGCTATCTCGAGCAGCTGctcgccaccgccgccgccgtttCCGTCCTACCAGCCAGGGTTCAGCCACTACCCGGCCGGCCAGCTGCCGGCAGGACAGATGTCCTCCTCTGAGGCACCGCTGACCCCCACACATGCTCCTACACACTCGGTACCCCACCCGGGGGCAGGAGATTCCGGcggtggccagtggccactGTCGCCctctgccgccgccgctgccatGCTGAACTCCGTCTACGATTCCGCCGCCGACATGAATCCCCTCAAGCGCAAGAAGCTCTCGGCCATCTCCAGCATGCTGCTCAGTGGCACTCGGGACACGCCCATTCTGCGCAACGTCCTAGCCCAGGCCAACCCAGCAGACTCCTCGCAGTCCAGCCCCCTGCAGATCATGAAGGGCGACAAGACCCCTACGCATCCCCAGCAGCAGAACCCCCATCACGCCGGCGGAATGGGCGGAGGGGGCGAGCACAGCTTCAACGGATCTGACTACGGTGGCGACAAGGAGCCGCTGTCCCCGCACACCGACTGCTCCTTCGATGCGGAGAGTGGCAATTCCGGAGGCAAGAAGCCGGAATGGAAGCGCTACAAGCAGTACACCCGGGCTGACATGATGTGCGCCATCCAGGCGGTGCGCGAGGGGATGAGTGCCCTGCAGGCCAGCCGGAAGTACGGCCTCCCCAGTCGGACTCTGTACGACAAGGTCCGCAAGCTAAACATCACCACAGGTAGAGGCACCCACCGGACACCCAAGCGCAGTCCCCCGGGCGCCGAATCCTCCTCGGGAGCCCCTTATTCGCCGTACTCGgccgcagccgccgccgctgctgcccaCAACTACGGTGGCCACTCACACGGTCACGGACATGGTCACCACCAGCCGGAGCACCTCGAGCGCAAGTCGAAGGCCGGAGGAGAGCATGTGCCTGCCCATCACGGTATGCCACCCACCATTCCCCACTCCGCGGCTGCTCTCCTCGACCAtgctttcctgcagcaggctCTGGAGAACCGCGGCGGCGAAATGGCCGGAAGGGAGGCCCTCCACGCCATGGCCCTGGCTGCCGCCGCCCACGCTGCCGCCAATCGCATGTCCAGCAGTCCGCCTGAGACGGACCACCATTCGAATGGCCACCACGGCATGCGCTCGCCCAGCCCCGAACGCCACTACCAGGAGGCCATGGACCTGGAGATGGAGAAGCACGAGCAGCGCCTCATCAAGCGCGAGCGCGACCAGGACGAGCGCGAAGACGCGGACGACGAAGAGGACCAGGAGCAAGAGCACGTCGAGGATCTGTCCCTGGCCCGGAAGGAGCGTCCAGAATCACCCTACTCCCCGCCGCCAGCCGAGGGAGCGGGCGTGATCATGCACGCCGGCAGTGCCCCGACCAACGGCAAGGAGCACGAGGACTACCATCCGGCGGGCTCGCCCCTGGTGCTGAAGCGCGAGCTCATCGGCGGCGATGAGGCTCAGGCCCGGGCCGACTGA
- Protein Sequence
- MGGPTAPVASSGGGPAEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFQAHRVVLAANSPYFQHILRDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHQASATPTSSSGALGGKPLNGSASQHQHSSSVISTSTHISPSAAISSSCSPPPPPFPSYQPGFSHYPAGQLPAGQMSSSEAPLTPTHAPTHSVPHPGAGDSGGGQWPLSPSAAAAAMLNSVYDSAADMNPLKRKKLSAISSMLLSGTRDTPILRNVLAQANPADSSQSSPLQIMKGDKTPTHPQQQNPHHAGGMGGGGEHSFNGSDYGGDKEPLSPHTDCSFDAESGNSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAESSSGAPYSPYSAAAAAAAAHNYGGHSHGHGHGHHQPEHLERKSKAGGEHVPAHHGMPPTIPHSAAALLDHAFLQQALENRGGEMAGREALHAMALAAAAHAAANRMSSSPPETDHHSNGHHGMRSPSPERHYQEAMDLEMEKHEQRLIKRERDQDEREDADDEEDQEQEHVEDLSLARKERPESPYSPPPAEGAGVIMHAGSAPTNGKEHEDYHPAGSPLVLKRELIGGDEAQARAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00477413; iTF_00476010; iTF_00477267; iTF_00475863; iTF_00550330; iTF_00488098; iTF_00539042; iTF_00538885; iTF_00487927; iTF_00566008; iTF_00566170; iTF_00615646; iTF_00615493; iTF_00481471; iTF_00481620; iTF_00503916; iTF_00504073; iTF_00614833; iTF_00614986; iTF_00580056; iTF_00579908; iTF_00546047; iTF_00545893;
- 90% Identity
- iTF_00550330;
- 80% Identity
- iTF_00550330;