Datr007099.1
Basic Information
- Insect
- Drosophila atripex
- Gene Symbol
- fru
- Assembly
- GCA_035045925.1
- Location
- JAWNOP010000052.1:1412592-1414619[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-12 1e-08 34.8 0.1 1 44 380 423 380 424 0.91
Sequence Information
- Coding Sequence
- ATGGGCGGCCCCACGGCGCCTGTagccagcagcggcagcggtcCGGCGGAGGTGGGCCAGACCTACTGCCTTCGGTGGAACAACCATCAGACCAACCTGGTCCAGATCCTGCACGCCCTGCACGAGGTGGGCAGCTATGTCGACTGCACCCTGGTGGTGGACGACGAACAGTTCCAGGCCCATCGAGTGGTCCTGGCTGCCAATTCGCCGTATTTCCAGCACATCCTCCGGGACGTGCCGCAGGATCACTGCAGCATCATTCTACCAGGGGTGAAGGGCTTCGAGATCGCCGCCCTGCTCCAGTACATGTATACTGGCGAGACGACCGTTACCAAGAGCCAGGAGCCGGAGATCCTGCGCACCGCCAAGGAGCTGCAGGTCAAGGGCTTGTACGACAACCTCATGAAGTTCAACCACCAGTccagtgccacgcccacatccAGCTCTGGAGCAGTAGGGGGCAAGCCCTTGAACGGCTCAGCCTCGCAGCACCAGCACTCCTCGTCCGTGATCTCCACATCCACCCACATCTCGCCCAGTGCCGCTATCTCGAGCAGCTGctcgccaccgccgccgccgttcCCGTCCTATCAGCCAGGGTTCAGCCACTACCCCGCCGGCCAGCTGCCGGCAGGACAGATGCCCTCATCGGAGGCACCGCTGACCCCTACACATGCTCCTACACACTCGATACCCCACTCGGGGGCAGGAGAGTCCGgcggtggccagtggccactgTCGCcctctgccgctgccgctgccatgCTGAACTCCGTCTACGATTCCGCCGCCGACATGAATCCTCTCAAGCGCAAGAAGCTCTCGGCCATCTCCAGCATGCTGCTCAGTGGCACTCGGGACACGCCCATTCTGCGCAACGTCCTAGCCCAGGCCAACCCAGCAGACTCCTCGCAGTCCAGCCCCCTCCAGATCATGAAGGGCGACAAGACCCCGACGCATCCCCAGCCGCAGAACCCCCATCACGCCGGGGGAATGGGTGGGGGCGAGCACAGCTTCAACGGATCTGACTACGGTGGCGACAAGGAGCCGCTGTCCCCGCACACCGACTGCTCCTTCGATGCCGAGAGTGGCAACTCCGGAGGCAAGAAGCCGGAGTGGAAGCGCTACAAGCAGTACACCCGGGCTGACATGATGTGCGCCATCCAGGCGGTGCGCGAGGGGATGAGTGCTCTGCAGGCCAGCCGTAAGTACGGCCTCCCCAGTCGGACTCTGTACGACAAGGTGCGCAAGCTAAACATCACCACAGGTAGAGGCACCCACCGGACACCCAAGCGCAGTCCCCCGGGTGCCGAATCCTCCTCCGGAGCCCCTTACTCGCCGTACTCGgccgcagccgccgccgctgctgcccaCAACTACGGTGGTCACTCACACGGCCACGGACATGGTCACCACCAGCCTGAGCACCTGGAGCGCAAGTCGAAGGCCGGAGGAGAGCATGTGCCTGCCCACCACGGCATGCCACCCACCATTCCCCACTCCGCGGCAGCTCTCCTCGACCATGCTTTCCTGCAGCAGGCTCTGGAGAACCGCGGCGGCGAAATGGCCGGAAGGGAGGCCCTCCACGCCATGGCCCTGGCTGCCGCCGCCCACGCTGCTGCCAATCGCATGTCCAGCAGTCCGCCTGAGACGGACCACCATTCGAATGGCCATCACGGCATGCGCTCGCCCAGCCCCGAACGCCACTACCAGGAGGCCATGGACCTGGAGATGGAGAAGCACGAGCAGCGCCTTATCAAGCGAGAGCGCGACCAGGACGAGCGCGAAGACGCGGACGACGAAGAGGACCAGGAGCAAGAGCACGTCGAGGATCTGTCCCTGGCCCGCAAGGAGCGTCCGGAATCACCCTACTCCCCGCCGCCAGCCGAGGGAACGGGCGTGATCATGCACGCCGGCAGTGCCCCGACCAACGGCAAGGAGCACGAGGACTACCATCCGGCAGGCTCCCCCCTGGCGCTGAAGCGCGAGCTCATCGGCGGCGAGGAGGCTCAGGCCCGGGCTGACTGA
- Protein Sequence
- MGGPTAPVASSGSGPAEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFQAHRVVLAANSPYFQHILRDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHQSSATPTSSSGAVGGKPLNGSASQHQHSSSVISTSTHISPSAAISSSCSPPPPPFPSYQPGFSHYPAGQLPAGQMPSSEAPLTPTHAPTHSIPHSGAGESGGGQWPLSPSAAAAAMLNSVYDSAADMNPLKRKKLSAISSMLLSGTRDTPILRNVLAQANPADSSQSSPLQIMKGDKTPTHPQPQNPHHAGGMGGGEHSFNGSDYGGDKEPLSPHTDCSFDAESGNSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAESSSGAPYSPYSAAAAAAAAHNYGGHSHGHGHGHHQPEHLERKSKAGGEHVPAHHGMPPTIPHSAAALLDHAFLQQALENRGGEMAGREALHAMALAAAAHAAANRMSSSPPETDHHSNGHHGMRSPSPERHYQEAMDLEMEKHEQRLIKRERDQDEREDADDEEDQEQEHVEDLSLARKERPESPYSPPPAEGTGVIMHAGSAPTNGKEHEDYHPAGSPLALKRELIGGEEAQARAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00550182;
- 90% Identity
- iTF_00550330;
- 80% Identity
- iTF_00481620;