Basic Information

Insect: Drosophila pseudoananassae
Gene Symbol: fru
Assembly: GCA_018153035.1
Location: JAECXR010000001.1:5863273-5865318[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.9e-12 8.7e-09 34.8 0.1 1 44 386 429 386 430 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.9e-12	8.7e-09	34.8	0.1	1	44	386	429	386	430	0.91

Sequence Information

Coding Sequence: ATGGGCGGCCCCACGGCGCCTGTAGCCAGCAGTGGCATCGGAGGTGGTGGCGGTCCGGCGGAAGTGGGCCAGACCTACTGCCTCCGGTGGAACAACCACCAGACCAACTTGGTCCAGATCCTGCACGCCCTGCACGAGGTGGGCAGCTATGTGGACTGTACCCTTGTGGTGGACGACGAACAGTTCCAGGCCCATCGAGTGGTACTGGCAGCCAATTCGCCGTATTTCCAGCACATCCTCCGGGACGTGCCGCAGGACCACTGCAGCATCATATTACCAGGCGTGAAGAGCTTCGAGATCGCCGCCCTGCTCCAGTACATGTACACTGGCGAGACGACCGTTACCAAGAGCCAGGAGCCGGAGATCCTGCGCACCGCCAAGGAGCTGCAGGTTAAGGGCTTGTACGACAACCTCATGAAGTTCAACCACCAGACCAGTGCCACGCCCACATCCAGCTCGGGAGCGGTGGGGGGCAAACCCTTGAATGGCTCGGCCTCGCATCAGCAGCAGCAGCACTCTTCGTCCGTGATCTCCACATCCACCCACATCTCGCCCAGTGCCGCAATCTCGAGCAGCTGCTCGCCACCGCCGCCACCGTTCCCGTCCTATCAGCCAGGGTTCAGCCACTACCCCACCGGCCAGCTCCCTTCGGGTCAGATGCCTCCATCTGAGGCACCGCTGACCCCCACCCACGCCCCCTCACACTCGGTACCCCATTCGGGGGCAGGAGAGTCCGGCGGTGGCCAGTGGCCACTGTCGCCCTCTGCCGCCGCCGCTGCCATGCTGAACTCCGTATACGAATCCGCCGCCGACATGAATCCTCTCAAGCGCAAGAAGCTATCTGCCATCTCTAGCATGCTGCTCAGTGGCACTCGGGACACGCCCATTCTGCGCAACGTCCTAGCCCAGGCCAACCCAGCAGACTCGTCGCAGTCCAGCCCCCTGCAGATCATGAAAGGCGACAAGACCCCGACCCATCCCCAGCAGCAGAACCCCCATCACGCCGGCGGAATGGGTGGGGGCGAGCACAGCTTCAACGGATCTGACTATGGTGGCGACAAGGAGCCGCTCTCCCCTCACACCGACTGCTCCTTCGATGCGGAGAGTGGCAATTCCGGAGGCAAGAAGCCGGAGTGGAAGCGCTACAAGCAGTACACCCGGGCTGACATGATGTGCGCCATCCAGGCGGTGCGCGAGGGCATGAGTGCTCTGCAAGCCAGCCGGAAGTACGGCCTCCCAAGTCGAACCCTGTACGATAAGGTCCGCAAACTAAACATTACCACGGGCAGGGGCACCCACCGGACACCCAAGCGCAGTCCCCCGGGCGCCGAATCCTCCTCGGGAGCCCCTTACTCACCGTACTCGGCCGCAGCCGCCGCTGCTGCTGCCCACAATTACGGTGGTCACTCACACGGGCATGGGCATGGTCACCACCAGCCTGAGCACCTGGACCGCAAGTCAAAGGCCGGAGGAGATCATGTGCCTGCCCATCACGGCATGCCACCCACCATTCCCCACTCCGCGGCAGCGCTCCTTGACCATGCTTTCCTGCAGCAGGCTCTGGAGAACCGTGGCGGTGAAATGGCCGGCAGGGAGGCCCTCCACGCCATGGCTTTGGCTGCCGCCGCCCACGCTGCCGCCAATCGTATGTCCAGCAGTCCGCCGGAGACGGATCACCATTCTAATGGCCACCATGGTATGCGCTCGCCAACCCCTGAACGCCATTACCAGGAGGCCATGGACATGGAGATGGAGAAGCACGAGCAGCGTCTCATCAAGCGAGAGCGCGACCAGGACGAGCGTGAAGATGCGGACGACGAAGAGGACCAAGAGCAAGAGCACGTCGAGGATCTATCCCTGGCCCGGAAGGAGCGTCCAGAGTCACCCTACTCCCCGCAGCCAGCCGAGGGAGCGGGCGTAATCAAGCACGCCGGGAGTGCTCCGATCAACGGCAAGGAGCACGAGGATTACCCACCGGCAGGCTCACCCTTGGCCCTGAAGCGAGAGCTAATTGGCGGCGAGGAGGCTCAGGCCCGGGCTGACTGA
Protein Sequence: MGGPTAPVASSGIGGGGGPAEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFQAHRVVLAANSPYFQHILRDVPQDHCSIILPGVKSFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHQTSATPTSSSGAVGGKPLNGSASHQQQQHSSSVISTSTHISPSAAISSSCSPPPPPFPSYQPGFSHYPTGQLPSGQMPPSEAPLTPTHAPSHSVPHSGAGESGGGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLSGTRDTPILRNVLAQANPADSSQSSPLQIMKGDKTPTHPQQQNPHHAGGMGGGEHSFNGSDYGGDKEPLSPHTDCSFDAESGNSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAESSSGAPYSPYSAAAAAAAAHNYGGHSHGHGHGHHQPEHLDRKSKAGGDHVPAHHGMPPTIPHSAAALLDHAFLQQALENRGGEMAGREALHAMALAAAAHAAANRMSSSPPETDHHSNGHHGMRSPTPERHYQEAMDMEMEKHEQRLIKRERDQDEREDADDEEDQEQEHVEDLSLARKERPESPYSPQPAEGAGVIKHAGSAPINGKEHEDYPPAGSPLALKRELIGGEEAQARAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00550182;
90% Identity: iTF_00550330;
80% Identity: iTF_00580056;