Basic Information

Insect: Drosophila merina
Gene Symbol: fru
Assembly: GCA_035047645.1
Location: JAWNPH010000089.1:1689002-1691035[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.6e-12 1.1e-08 34.8 0.1 1 44 380 423 380 424 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.6e-12	1.1e-08	34.8	0.1	1	44	380	423	380	424	0.91

Sequence Information

Coding Sequence: ATGGGCGGCCCAACGGCGCCTGTGGCCAgcagtggcggtggcggtcCTGCAGAGGGAGGCCAGACGTACTGCCTCCGGTGGAACAACCATCAGACCAACTTGGTCCAGATACTGCACGCCCTGCACGAGGTGGGCAGCTACGTGGACTGCACCCTGGTGGTGGACGACGAACAGTTCCAAGCACATCGAGTGGTCCTGGCTGCCAACTCCCCGTATTTCCAGCACATCCTCCGCGATGTTCCACAGGATCACTGCAGCATCATTCTACCAGGGGTCAAGGGCTTCGAAATAGCCGCCCTGCTCCAGTACATGTACACCGGGGAGACGACGGTGACCAAGAGCCAGGAGCCGGAGATACTGCGCACCGCCAAGGAGCTGCAGGTTAAGGGCTTGTACGACAACCTCATGAAGTTCAACCACCAGGCCAGTGCCACACCCACATCCAGTTCAAGTGGCAAGCCGTTGAATGGCTCGGCCTcgcatcagcagcaacagcactCCTCGTCCGTGATCTCCACATCCACCCACATCTCGCCTAGCGCCGCCATCTCGAGCAGCTGCTCGCCACCACCTCCGCCGTTCCCGTCCTATCAGCCAGGGTTCAGTCACTACCCCACTGGCCCTCTGGCGGCGGGTCAGATGCCCTCCTCCGAGGCACCGCTGACCCCCACCCATGCTCCCACACACTCGGCACCTCACTCGGGCGCCGGAGAGTCCGCTGGTGGCCAGTGGCCACTCTCGCCCtccgctgccgccgctgccaTGCTGAACTCCGTCTACGAATCCGCCGCCGACATGAATCCTCTCAAGCGCAAGAAGCTCTCGGCCATCTCTAGCATGCTGCTCAGTGGCACTCGGGACACGCCCATTCTGCGCAATGTCCTAGCCCAGGCCAACCCGGCAGACTCCTCCCAGTCCAGTCCGCTGCAGATCATGAAGGGCGACAAGACCCCAACCCATCCCCAGCAACAGAACCCCCACCATGCCGGCGGAATGGGTGTGGGCGAGCACAGCTTCAATGGATCCGACTACGGTGGCGACAAGGAGCCGCTGTCCCCTCACACGGACTGCTCCTTCGATGCGGAAAGCGGCAATTCCGGTGGCAAGAAGCCGGAGTGGAAGCGCTACAAGCAGTACACGCGGGCGGATATGATGTGCGCCATCCAGGCGGTGCGGGAGGGAATGAGTGCTCTGCAGGCAAGCCGGAAATATGGTCTCCCAAGTCGCACCCTGTACGACAAGGTCCGTAAGTTGAACATCACCACGGGCAGGGGCACTCACCGGACTCCGAAGCGTAGTCCGCCTGGCGCTGAATCCTCCTCGGGTGCTCCCTACTCGCCCTACTCGGCCgcagctgccgccgctgctgcccaCAACTACGGTGGTCACTCCCACGGCCACGGACATGGCCATCACCAGCCGGAGCATCTTGAGCGGAAGCCAAAGACCGGAGGCGATCATGTCCCGGCCCATCATGGCATGCCACCCACCATTCCTCACTCCGCGGCAGCTCTCCTCGATCATGCCTTCCTGCAGCAGGCTCTGGAGAACCGTGGAGGCGACATGGCCGGACGGGAAGCCCTCCATGCCATGGCTCTGGCTGCCGCTGCTCATGCTGCGGCCAATCGCATGTCCAACAGTCCGCCAGAGACGGACCAGCATTCGAATGGCCATCATGGTATGCGTTCGCGAAGCCCCAGTCCCGATCGCCACTACCAGGAGGCCATGGACCTGGAGATGGAGAAGCACGAGCAGCGCATTATCAAGCGAGAGCGCGACCAAGATGAGCGCGAAGATGCGGACGACGAAGAGGACCAGGAGCAAGAGCACGTCGAGGATCTGTCCCTGGCAAGGAAGGAGCGTCCCGAATCACCCTACTCCCCGCAACCTGCCGAGGGAGCTGGCGTCATTATGCACGCTGGCAGTGCTCCGACCAACGGAAAGGAGCTCGAGGACTACCATCCGGCGGGCTCCCCATTGGTTTTGAAGCGGGAGCTCATTGGTGGCGAGGAGGCTCAGGCCCGGGCTGACTGA
Protein Sequence: MGGPTAPVASSGGGGPAEGGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFQAHRVVLAANSPYFQHILRDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHQASATPTSSSSGKPLNGSASHQQQQHSSSVISTSTHISPSAAISSSCSPPPPPFPSYQPGFSHYPTGPLAAGQMPSSEAPLTPTHAPTHSAPHSGAGESAGGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLSGTRDTPILRNVLAQANPADSSQSSPLQIMKGDKTPTHPQQQNPHHAGGMGVGEHSFNGSDYGGDKEPLSPHTDCSFDAESGNSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAESSSGAPYSPYSAAAAAAAAHNYGGHSHGHGHGHHQPEHLERKPKTGGDHVPAHHGMPPTIPHSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSNSPPETDQHSNGHHGMRSRSPSPDRHYQEAMDLEMEKHEQRIIKRERDQDEREDADDEEDQEQEHVEDLSLARKERPESPYSPQPAEGAGVIMHAGSAPTNGKELEDYHPAGSPLVLKRELIGGEEAQARAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00550182;
90% Identity: iTF_00550330;
80% Identity: iTF_00546047;