Dmic009966.1
Basic Information
- Insect
- Drosophila micromelanica
- Gene Symbol
- ftz-f1
- Assembly
- GCA_004143905.1
- Location
- SCDX01000442.1:2261-22199[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-19 7.9e-16 58.2 0.2 1 80 206 284 206 336 0.77 2 2 3.9e-72 3e-68 230.9 1.0 156 408 414 659 383 661 0.89
Sequence Information
- Coding Sequence
- ATggcgacgccgacgccagcgacgaagacgacgacggcgacgacggcgAATTGCGGTCGAAACCGTCCCTGGGCGAGTATCTCTCACTGTATACGTATTTGGTATCAGGAAACGAACTCATCCCACTCGCAGCAGAGCGGCAATGGAGCTAGCAGCGCAGCCGCTGCCAACTCCGGCGGCCAGCTACTGAACGGCGGCACCAGCTCAGCCGGCAACGGTTACATACTGTTGCCACCTGGCGCTGGTGGCGCCTCATCCGTTTCGGCTGCCCACATGTCCGGCAGCGTTGGCGGCTCGGCGGCCGTCGGCGGCGCTGGCGGTGGCACAGCCGGCGGTCATCACGGCGGTACCAGCGCCAGTTCGGGCGGCGGCGAAGCCATCGATTTTAAGCATCTGTTCGAAGAGCTCTGTCCCGTTTGCGGGGACAAGGTGAGCGGCTATCATTACGGGCTGCTCACCTGCGAGTCCTGCAAGGGCTTCTTCAAGCGGAccgtgcaaaacaaaaaggtcTACACTTGCGTCGCCGAGCGCTCCTGCCACATCGATAAAACACAGCGCAAACGTTGTCCCTATTGCCGGTTTCAGAAGTGCCTGGAGGTGGGCATGAAGCTAGAAGCCGTGCGAGCGGACCGAATGCGCGGCGGTCGCAACAAATTTGGACCGATGTACAAGCGGGATCGGGCGCGCAAGCTTCAGGTGATGCGCCAGCGGCAATTGGCGCTGCAGGCGTTGCGCAGTTCGATGGGGACGGACATAAAGCCGACGCCGCTTTCGCCGGGCTATCAGCAAGCATATccaaatatgaatattaagcAAGAAATTCAAATACCTCAGGTATCCTCACTAACGCAATCGCCAGACTCATCGCCCAGCCCGATCGCCATTGCATTGGGCCAGGTGAATGCCAGCGGGGGCGGTGTGATAGCCACGCCTCTGAATGCTGGCAATTTGagtggcggcaacaacagctccTCACTTGgtaatggcaacaacaacaccaacaacaacaacaacaacaacagcagcagcaacagcacaggcagcggcagcggcgggggaggaggaggaggaggaagcgGAGGGGGCAACAACGCTGGTGgcggtggcagcaacaacCTCGTCGATGGCCTGCAACGCAACGgaaacagcggcaacagcaacagcagctgccacgaAACCGGCAACGGATCTCTGACGAACACGGCCGAATCGAAATTGTGCTTCGATTCTGGCACACATCCATCGAGCACAGCCGATACGCTTATAGAGCCGCTGAGGGTCTCTCCGATGATACGTGAGTTTGTGCAATCGATTGACGATCGGGAATGGCAAACGCAGCTTTTTGCGCTGCTGCAGAAGCAGACGTACAATCAAGTTGAAGTAGATCTCTTTGAGTTAATGTGCAAAGTGCTTGATCAGAATCTGTTCTCGCAAGTTGATTGGGCAAGAAACACCGTCTTCTTTAAGGATTTGAAGGTGGACGATCAGATGAAGCTGCTTCAACATTCATGGTCCGATATGCTTGTGTTGGATCATCTGCACCATCGCATCCACAACGGTTTGCCGGATGAGACACAGCTGAATAATGGCCAGGTCTTTAACTTGATGTGCCTGGGCCTGTTGGGTGTGCCGCAGCTGGGCGACTACTTCAACGAACTGCAAAACAAGCTGCAGGACCTTAAGTTTGATATGGGCGACTATGTCTGCATGAAATTCCTAATACTTTTAAATCCAGATGTGCGTGGAAttgtgaacaaaaagaccgtcCTGGAGGGACATGAGAATGTGCAGGCAGCGCTACTGGATTACACACTCACGTGTTATCCCTCAGTAAATGACAAATTCAGGAGGCTATTGAACATACTACCGGAAATTCACGCGATGGCCGCACGGGGCGAGGAGCACCTGTACTCAAAGCACTGTGCTGGCAGTGCGCCCACGCAGACGCTGCTGATGGAGATGCTGCACGCCAAGCGGAAGGTGTAG
- Protein Sequence
- MATPTPATKTTTATTANCGRNRPWASISHCIRIWYQETNSSHSQQSGNGASSAAAANSGGQLLNGGTSSAGNGYILLPPGAGGASSVSAAHMSGSVGGSAAVGGAGGGTAGGHHGGTSASSGGGEAIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRSSMGTDIKPTPLSPGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNASGGGVIATPLNAGNLSGGNNSSSLGNGNNNTNNNNNNNSSSNSTGSGSGGGGGGGGSGGGNNAGGGGSNNLVDGLQRNGNSGNSNSSCHETGNGSLTNTAESKLCFDSGTHPSSTADTLIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRIHNGLPDETQLNNGQVFNLMCLGLLGVPQLGDYFNELQNKLQDLKFDMGDYVCMKFLILLNPDVRGIVNKKTVLEGHENVQAALLDYTLTCYPSVNDKFRRLLNILPEIHAMAARGEEHLYSKHCAGSAPTQTLLMEMLHAKRKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00534609;
- 90% Identity
- iTF_00547409; iTF_00598187; iTF_00598209; iTF_00490831; iTF_00550921; iTF_00490808; iTF_00550941; iTF_00526608; iTF_00526632; iTF_00495891; iTF_00495914; iTF_00506140; iTF_00506164; iTF_00531004; iTF_00530982;
- 80% Identity
- iTF_00547409;