Dkan001939.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila kanekoi
Gene Symbol
ftz-f1
Assembly
GCA_037075305.1
Location
JBAMCE010000090.1:7385527-7398600[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.16 1.5e+03 -1.7 20.4 46 167 25 158 6 163 0.65
2 3 1.6e-19 1.5e-15 57.6 0.5 1 79 322 399 322 421 0.75
3 3 2.5e-72 2.3e-68 231.5 1.2 157 408 529 773 497 775 0.90

Sequence Information

Coding Sequence
ATGTTATTAGAAATGGATCCACAACAGGCGACTGTACAGTTTATATCGTCGCTGAATCTGTCGCCGTTTAGCATGCAGCtcgaccagcagcagcccgcGAGTCCAGCGCagagcaacaccaacaacaacaacaacaacggcaacaataacagtggCAATAACAGtggcaataacagcagcagcaacaacaacaacgataacgaTACAAACGCTTTGAGCAATTCCGATAACGATTACAGCGCCTACACGCTGCAATTGGGcaatcatcagcagcagcagcaacaacagcaacaacatcacacgcatcaccagcagcagcagcagcagcaacaacaacaacattaccaacaacaacagaatatTGCCAGCAACAATACGAATGCCGCGAACCAATTCAACGCCTCCTCTTACtcgtatatatacaatttcgATTCACAGTATATATTTCCGACAGGGTATCAGGAAACGAACTCATCTCATTCGCAGCAAAGCGGCAATGGGGCTGGCAACGCGGCggctggcaactctggccagctgctgaacggcggcagcggcgctgCGGGCAACGGTTacatgctgctgccgccgggcGCTGGCGGCGCCTCGGCTGCACACATGTCCGGCAGCGTGGGCGGCAGCGGTGCGGCGGGCGGCGCTGGCGGTGCGGGTGGCGCTGGCGGGGGCCATCATGGCGGGACGAGCGCCAGCTCTGGCGGAGGCGAGGCCATCGACTTTAAGCACCTGTTCGAGGAGCTGTGCCCCGTCTGCGGCGACAAGGTGAGCGGCTATCATTACGGCCTGCTCACCTGCGAGTCCTGCAAGGGCTTCTTCAAGCGCACCGTTCAGAACAAAAAGGTCTACACTTGCGTTGCGGAGCGCTCCTGCCACATCGATAAGACGCAGCGCAAACGTTGTCCATATTGTCGATTCCAAAAGTGCCTGGAGGTGGGCATGAAACTAGAAGCTGTTCGAGCGGATCGCATGCGCGGCGGTCGGAACAAATTCGGACCCATGTACAAGCGGGATCGGGCGCGCAAGCTGCAGGTGATGCGTCAGcggcagctggcgctgcaggCGCTGCGCAGTTCGATAGGCACGGACATAAAGCCGACGCCGCTGTCGCCGGGCTATCAGCAAGCATATccaaatatgaatattaagcAAGAAATTCAAATACCTCAGGTATCCTCACTCACGCAATCGCCGGACTCGTCGCCCAGCCCCATTGCGATCGCCTTGGGCCAGGTGAATGCAGGCGCGGGCGGTGTGATAGCCACGCCCCTGAATGCTGGCAATCTGAGCGGCGGCAACGGGAACGGCGGCAGCTCCTCGCtgggcaatggcaacaacaacaccaacaacaacagcacaggcagcggcagcggcggcggcggcagtggAGGAGGCAACaacgccggcggcggcggcggcggtggaggTGGTAGCAACAATCTCGCCGACGGCCTGCAACGCAACGGAAacagtggcaacagcaacagcaacagcagttgcCACGAAACCGGACCTGGATCTCTGCAGAACACAGCCGAATCGAAATTGTGCTTTGATTCTGGCACACATCCATCGAGCACAGCCGATGCGCTCATCGAGCCGCTGAGGGTCTCGCCGATGATACGTGAGTTTGTGCAATCGATCGACGATCGGGAATGGCAGACGCAGctctttgcgctgctgcagaagCAGACGTACAACCAGGTGGAAGTGGATCTCTTTGAGCTAATGTGCAAAGTGCTGGATCAGAATCTGTTCTCGCAAGTGGACTGGGCAAGAAACACAGTCTTCTTTAAGGACTTGAAGGTGGACGATCAGATGAAGCTGCTTCAGCACTCGTGGTCGGACATGCTTGTGCTGGATCATCTGCATCATCGCATACACAACGGCCTGCCGGACGAGACGCAGCTGAACAACGGGCAGGTCTTCAACCTGATGAGCCTGGGCCTGTTGGGTGTGCCACAGCTGGGCGACTACTTCAACGAGTTGCAAAATAAGCTGCAGGACCTGAAGTTCGATATGGGCGACTATGTGTGCATGAAATTCCTAATACTTTTAAATCCAGATGTGCGTGGAATCGTGAACAAAAAGACCGTCGTGGAGGGTCACGAGAATGTGCAGGCTGCGCTGCTGGATTACACGCTAACGTGTTATCCCTCGGTTAATGACAAATTCAGGAGGCTTTTGAACATACTACCGGAAATTCACGCCATGGCCGCACGGGGCGAGGAGCACCTGTACTCGAAGCACTGTGCCGGCAGTGCGCCGACGCAGACGCTGCTTATGGAGATGCTGCATGCCAAGCGGAAAGTGTAA
Protein Sequence
MLLEMDPQQATVQFISSLNLSPFSMQLDQQQPASPAQSNTNNNNNNGNNNSGNNSGNNSSSNNNNDNDTNALSNSDNDYSAYTLQLGNHQQQQQQQQQHHTHHQQQQQQQQQQHYQQQQNIASNNTNAANQFNASSYSYIYNFDSQYIFPTGYQETNSSHSQQSGNGAGNAAAGNSGQLLNGGSGAAGNGYMLLPPGAGGASAAHMSGSVGGSGAAGGAGGAGGAGGGHHGGTSASSGGGEAIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRSSIGTDIKPTPLSPGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNAGAGGVIATPLNAGNLSGGNGNGGSSSLGNGNNNTNNNSTGSGSGGGGSGGGNNAGGGGGGGGGSNNLADGLQRNGNSGNSNSNSSCHETGPGSLQNTAESKLCFDSGTHPSSTADALIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRIHNGLPDETQLNNGQVFNLMSLGLLGVPQLGDYFNELQNKLQDLKFDMGDYVCMKFLILLNPDVRGIVNKKTVVEGHENVQAALLDYTLTCYPSVNDKFRRLLNILPEIHAMAARGEEHLYSKHCAGSAPTQTLLMEMLHAKRKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00485910;
90% Identity
iTF_00547388;
80% Identity
iTF_00526632;