Basic Information

Insect: Drosophila lutescens
Gene Symbol: -
Assembly: GCA_037075285.1
Location: JBAMCF010000413.1:1712398-1714217[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.23 19 6.3 0.5 6 23 247 264 247 264 0.99

2 9 0.029 2.3 9.1 0.6 1 23 270 293 270 293 0.97

3 9 6.2e-05 0.005 17.5 1.9 1 23 301 323 301 323 0.97

4 9 8.4e-07 6.8e-05 23.4 3.3 2 23 330 352 330 352 0.98

5 9 3e-05 0.0024 18.5 0.4 1 23 359 382 359 382 0.97

6 9 0.07 5.6 7.9 0.2 2 23 392 413 391 413 0.95

7 9 0.11 8.6 7.3 0.3 2 23 423 444 422 445 0.93

8 9 1.1e-05 0.00085 19.9 3.7 1 23 450 472 450 472 0.98

9 9 0.00013 0.01 16.5 3.7 1 23 478 501 478 501 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.23	19	6.3	0.5	6	23	247	264	247	264	0.99
2	9	0.029	2.3	9.1	0.6	1	23	270	293	270	293	0.97
3	9	6.2e-05	0.005	17.5	1.9	1	23	301	323	301	323	0.97
4	9	8.4e-07	6.8e-05	23.4	3.3	2	23	330	352	330	352	0.98
5	9	3e-05	0.0024	18.5	0.4	1	23	359	382	359	382	0.97
6	9	0.07	5.6	7.9	0.2	2	23	392	413	391	413	0.95
7	9	0.11	8.6	7.3	0.3	2	23	423	444	422	445	0.93
8	9	1.1e-05	0.00085	19.9	3.7	1	23	450	472	450	472	0.98
9	9	0.00013	0.01	16.5	3.7	1	23	478	501	478	501	0.97

Sequence Information

Coding Sequence: ATGATATGTCGCCTCTGCCTGGACAATGCGGAGCACAGCGTGCCGATCTTCGACCAGGAGGACCAGGAGGAGGCGCCCTCCAATCTGGCGGAGCTGATTGAGAAGCACCTGCAGTTGGTGCTCCTGCCCAACGACGCGGTGTCCAAGTGCCTGTGCACCCAGTGCTGGCAGCAGTTGGCCGACTTTGAGCAGTTCTGCGCCATGGTGATGAAGAAGCAGCTGGGCCTGCAGCAGCTGAAGATGGAGCCGTTCTCGGAGGACGAGGATGCGGACACCAAGGCGCAGATCCTGTGCGAGCCGGAGATCGATGTGAGTCCTGCGGCGGCGGACAACGAGGAATGCAACGAGATCGACGGCGAtgccagcagcagaagcagcagcaggagcagcagcctcCGGACGTCCACCAACCGGCGAAGGATGCGCCTGCCCTCGCCCATCAGGCGAACAATGCGACCCCGGGCTGCTGCCGCCGCGGCGCCCAAAAGCCGGGTCGCCAGGGCCAAGGCCAAGACGAAGCGCCACCAGGAGGAGGcggacgaggatgaggaggccGAGGCCGAGGGCGACGGCGATCCGGAGAGCCGGAGCAGCAACAGCCGAGAAATGGACAGCTACATTGCGCTGCACGGCCGCCTGGAGTGCTGCATGTGCGGCGGCGACGATCAGTTCCAGAACTTTGCCGAGATGAAGCGACACTTCCGGAACCATCACCAGTCCGCCGGCTATGTGATCTGCTGCCAGCGGCGCTACAAGAAGCGGGCCCTCTACGTGGACCACCTCCGGATGCACAACGATCCGGACTACTTTCGGTGCAAGATCTGCGCCAAGCAGCTGGTCAGCCGCATCAGCTACGACGTGCACATGCTGCGCTTCCACTCCAACGAGGACGAGCTGAGCTTCGCCTGCAATCAGTGCTCCAAGCGCTTCTCCAAGCAGTTCCTGCTCACCATCCACTCCAGGGTGCACCAGCAGGAGCGAAAGGAGCAGTGCAAGCACTGCGACAGATCCTTTCGCACCGCCGTCGATCTGCGGCTGCACATGCGACGCACCCATGACCCCGCCTTCGTGCCCTTCATCTGCGACGCGTGCGGGGCCAAGTTCAAGACGAAGCAGAACCTGCTGGTCCACAAGCGCACCGTCCACCGCGAGGGCTCCCAGCTGCCGGAGGTGCAGTGCCAGGAGTGCCAGGTGTGGCTCTCCGACGAGAACAGCCTGCGCAAGCACATGTACATGCACCTGGACGCCGCCTCGCTGCGTCAGTGGAAGTGCGAGCAGTGCGGCCTGGAGAAGGGCTCGCGGGCGAAGCTGGCGGCGCACATACGCTACCATCACCCGAAGGAGTACCACAAGTGCACGCACTGCGGCAAGGAGTTCAAGAGCAGCCGGGGGCTCGAGGAGCACACGGCCACGCACACTGGACAGGATCTGTACGAGTGCGCCTTCTGCGAGCGCACGTTCAAGAACTCGGGCAACATGCACAAGCACCGGCGACAGATGCACGCCGCCCAGGTGGCCGccctgcagcagcagaagaaggTGCGGCCCAGCAAGCGCAAGGACAAGGGCGACCTGCTGCTGGACGTCCTGGCCGCCGGCGGAAAGGAACTGAACCACGCCATGGGAGTggcggtgggcgtgggcgtTGGAGTGGTAGGGGGCGACCTGAACGACTGA
Protein Sequence: MICRLCLDNAEHSVPIFDQEDQEEAPSNLAELIEKHLQLVLLPNDAVSKCLCTQCWQQLADFEQFCAMVMKKQLGLQQLKMEPFSEDEDADTKAQILCEPEIDVSPAAADNEECNEIDGDASSRSSSRSSSLRTSTNRRRMRLPSPIRRTMRPRAAAAAAPKSRVARAKAKTKRHQEEADEDEEAEAEGDGDPESRSSNSREMDSYIALHGRLECCMCGGDDQFQNFAEMKRHFRNHHQSAGYVICCQRRYKKRALYVDHLRMHNDPDYFRCKICAKQLVSRISYDVHMLRFHSNEDELSFACNQCSKRFSKQFLLTIHSRVHQQERKEQCKHCDRSFRTAVDLRLHMRRTHDPAFVPFICDACGAKFKTKQNLLVHKRTVHREGSQLPEVQCQECQVWLSDENSLRKHMYMHLDAASLRQWKCEQCGLEKGSRAKLAAHIRYHHPKEYHKCTHCGKEFKSSRGLEEHTATHTGQDLYECAFCERTFKNSGNMHKHRRQMHAAQVAALQQQKKVRPSKRKDKGDLLLDVLAAGGKELNHAMGVAVGVGVGVVGGDLND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00609377;
90% Identity: iTF_00529793; iTF_00505634; iTF_00605098; iTF_00486817; iTF_00602867; iTF_00605835; iTF_00512238; iTF_00588380; iTF_00494623; iTF_00515758; iTF_00578802; iTF_00548309; iTF_00507830; iTF_00581788;
80% Identity: -