Basic Information

Insect: Drosophila gunungcola
Gene Symbol: -
Assembly: GCA_011057485.1
Location: WTSR01005162.1:241544-243397[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.15 14 6.3 0.5 6 23 248 265 248 265 0.99

2 9 0.0052 0.49 10.9 1.0 1 23 271 294 271 294 0.97

3 9 4.6e-05 0.0043 17.3 1.5 1 23 302 324 302 324 0.97

4 9 5.4e-07 5.1e-05 23.4 3.3 2 23 331 353 331 353 0.98

5 9 8.9e-06 0.00083 19.6 0.7 1 23 360 383 360 383 0.97

6 9 0.045 4.2 7.9 0.2 2 23 393 414 392 414 0.95

7 9 0.069 6.4 7.3 0.3 2 23 424 445 423 446 0.93

8 9 6.8e-06 0.00063 19.9 3.7 1 23 451 473 451 473 0.98

9 9 8.2e-05 0.0076 16.5 3.7 1 23 479 502 479 502 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.15	14	6.3	0.5	6	23	248	265	248	265	0.99
2	9	0.0052	0.49	10.9	1.0	1	23	271	294	271	294	0.97
3	9	4.6e-05	0.0043	17.3	1.5	1	23	302	324	302	324	0.97
4	9	5.4e-07	5.1e-05	23.4	3.3	2	23	331	353	331	353	0.98
5	9	8.9e-06	0.00083	19.6	0.7	1	23	360	383	360	383	0.97
6	9	0.045	4.2	7.9	0.2	2	23	393	414	392	414	0.95
7	9	0.069	6.4	7.3	0.3	2	23	424	445	423	446	0.93
8	9	6.8e-06	0.00063	19.9	3.7	1	23	451	473	451	473	0.98
9	9	8.2e-05	0.0076	16.5	3.7	1	23	479	502	479	502	0.97

Sequence Information

Coding Sequence: ATGATATGCCGTCTCTGCCTGGACGACGCGGAGCACAGCGTGCCGATCTTCGACCAGGAGGACACCACCGAGCAGCCGGTGCCCTCCAACCTGGCGGAACTGATTGAGAAGCACCTGCAGTTGGTGCTCCTGCCCAACGATGCGGTGTCCAAGTGCCTGTGCACCCNGTGCTGGCAGCAGTTGGCCGACTTCGANCAGTTCTGCGCCATGGTGATGAAGAAGCAGCTGGGcctgcagcagctgaagatCGAGCCCTTCTCGGAGGACGAGGATGCGGACACGAAGGCTCAGATCCTGTGCGAGCCGGAGATCGACGTGAGTCCCGGGGCGGCGGACAACGAGGAGTGCAACGAGATCGATGGCGATgccagcagtggcagcagcaggagcaggagcagtaGTATCCGGGCCACCAGTCGACGGAGGATGCGTTTGCCCTCGCCCATCCGGCGYNGTATGCGWCCGcgcgccgccgccgcagcccCCNNNNCNCNGGTCGTTAAGGCCAAGGCCAAGACGAAGCGCCACCAGGAGCTGGCAGAGGCGGAGGtggacgaggatgaggatgccGAGGGTGATCCGGAAAGCCGGACCAGCAACAGCCGGGAAATGGACAGCTACATCGCTTTGCATGGCCGTCTGGAGTGCTGCATGTGCGGCGGCGACGATCAGTTCCAGAACTTTGCCGAGATGAAGCGCCATTTCCGGAATCAGCACCAATCCGCCGGCTATGTGGTCTGCTGTCAACGACGCTACAAGAAGCGGGCCCTCTACGTCGACCATCTGCGCATGCACAACGATCCGGATTACTTTAGGTGCAAGATCTGTTCCAAGCAGCTGGTCAGCCGGATTAGCTACGATGTACACATGCTGCGCTTCCACTCCAACGAGGACGAGCTGAGCTTCGCCTGCGATCAGTGCTCCAAGCGGTTCTCCAAGCAGTTTCTGCTCACCATCCACTCCAGGGTGCACCAGCAGGAGCGAAAGGAGCAGTGCAAGCACTGCGACAGATCCTTCCGTACCGCCGTGGACCTGCGACTGCACATGCGACGCACCCATGACCCCGCCTTTGTGCCCTTCATCTGCGACTCGTGCGGCGCCAAGTTCAAGACGAAGCAGAACTTGCTGGTGCACAAGCGCACAGTGCACCGCGAGGGCTCTCAGCTGCCGGAGGTGCAGTGCCAGGAGTGCCAGGTGTGGCTGTCCGACGAGAACAGCCTGCGCAAGCACATGTACATGCACCTGGATGCCGCCTCGCTGCGGCAGTGGAAGTGCGAGCAGTGCGGCCTGGAGAAGGGCTCGCGGGCGAAGCTGGCGGCCCACATACGCTACCATCATCCCAAGGAGTACCACAAGTGCACGCACTGCGGCAAGGAGTTCAAGAGCAGCCGCGGCCTCGAGGAGCACACGGCCACGCACACCGGCCAGGATCTGTACGAGTGCGCCTTCTGCGAGCGCACCTTCAAGAACTCGGGCAACATGCACAAGCACCGCCGCCAAATGCACGCCGCCCAGGTGGCcgccctgcagcagcagaagaaggTGCGGCCCAGCAAGCGCAAGGACAAGGGCGACCTGCTGCTCGACGTCCTTGCCGCCGGCGGAAAGGAACTGGACCACGCCCACGCCATGGGAGTGGGCATAAACGACATGAACGACTGA
Protein Sequence: MICRLCLDDAEHSVPIFDQEDTTEQPVPSNLAELIEKHLQLVLLPNDAVSKCLCTXCWQQLADFXQFCAMVMKKQLGLQQLKIEPFSEDEDADTKAQILCEPEIDVSPGAADNEECNEIDGDASSGSSRSRSSSIRATSRRRMRLPSPIRRXMRPRAAAAAPXXXVVKAKAKTKRHQELAEAEVDEDEDAEGDPESRTSNSREMDSYIALHGRLECCMCGGDDQFQNFAEMKRHFRNQHQSAGYVVCCQRRYKKRALYVDHLRMHNDPDYFRCKICSKQLVSRISYDVHMLRFHSNEDELSFACDQCSKRFSKQFLLTIHSRVHQQERKEQCKHCDRSFRTAVDLRLHMRRTHDPAFVPFICDSCGAKFKTKQNLLVHKRTVHREGSQLPEVQCQECQVWLSDENSLRKHMYMHLDAASLRQWKCEQCGLEKGSRAKLAAHIRYHHPKEYHKCTHCGKEFKSSRGLEEHTATHTGQDLYECAFCERTFKNSGNMHKHRRQMHAAQVAALQQQKKVRPSKRKDKGDLLLDVLAAGGKELDHAHAMGVGINDMND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00609377;
90% Identity: iTF_00537021;
80% Identity: -