Basic Information

Insect: Drosophila takahashii
Gene Symbol: -
Assembly: GCA_018152695.1
Location: JAECXN010000001.1:20756496-20758449[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.21 13 6.3 0.5 6 23 235 252 235 252 0.99

2 9 0.025 1.6 9.2 0.6 1 23 258 281 258 281 0.97

3 9 5.5e-05 0.0034 17.6 1.9 1 23 289 311 289 311 0.97

4 9 7.5e-07 4.6e-05 23.4 3.3 2 23 318 340 318 340 0.98

5 9 2.7e-05 0.0017 18.5 0.4 1 23 347 370 347 370 0.97

6 9 0.062 3.8 7.9 0.2 2 23 380 401 379 401 0.95

7 9 0.095 5.8 7.4 0.3 2 23 411 432 410 433 0.93

8 9 9.3e-06 0.00058 20.0 3.7 1 23 438 460 438 460 0.98

9 9 0.00011 0.0069 16.6 3.7 1 23 466 489 466 489 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.21	13	6.3	0.5	6	23	235	252	235	252	0.99
2	9	0.025	1.6	9.2	0.6	1	23	258	281	258	281	0.97
3	9	5.5e-05	0.0034	17.6	1.9	1	23	289	311	289	311	0.97
4	9	7.5e-07	4.6e-05	23.4	3.3	2	23	318	340	318	340	0.98
5	9	2.7e-05	0.0017	18.5	0.4	1	23	347	370	347	370	0.97
6	9	0.062	3.8	7.9	0.2	2	23	380	401	379	401	0.95
7	9	0.095	5.8	7.4	0.3	2	23	411	432	410	433	0.93
8	9	9.3e-06	0.00058	20.0	3.7	1	23	438	460	438	460	0.98
9	9	0.00011	0.0069	16.6	3.7	1	23	466	489	466	489	0.97

Sequence Information

Coding Sequence: ATGATATGTCGCCTCTGCCTGGACAATGCGGAGCACAGCGTGCCGATCTTCGACCAGGAGGAGCAGCAGCAGGAGGAGGCGCCCTCCCATCTGGCTGAGCTAATTGAAAAGCACCTGCAGTTGGTGCTCCTGCCCAACGACGCGGTGTCCAAGTGCCTGTGCACCCAGTGCTGGCAGCAGCTGGCCGACTTCGAGCAGTTCTGCGCCATGGTGATGAAGAAGCAGCTGGGCCTGCAGCAGCTGAAAATGGAGCCTTTTTCGGAGGACGACGAGGATGCGGACACCAAGGCGCAGATCCTGTGCGAGCCGGAGATCGATGTGAGTCCCGCGCCGGCGGACAACGAGGAGTGCAACGAGATCGATGGCGATGCGAGCAGCAAGAGCAGCAGGAGCAGCAGCAGGATGCCCTCGCCCATCAGGCGAACAATGCGACCAAGGGCGGCGGCAGCACCCAAAAGCCGGGTGGCCAAGGCGAAGGCCAAGACGAAGCGCCACCAGGAGGAAGCGGACGAGGATGAGGAGGCGGAGGGTGACCCAGAAAGCCGTAGCACCAATAGCCGCGAAATGGACAGCTACATCGCGCTGCATGGCCGCCTGGAGTGCTGCCTGTGCGGCGGCAGCGACGACGATCAGTTCCAGAGCTTCGCCGAGATGAAGCGTCACTTCCGCAGCCATCACCAGTCCGCCGGCTATGTGGTCTGCTGCCAGCGGCGCTACAAGAAGCGCGCCCTCTACGTCGACCACCTGCGCATGCACAACGATCCCGATTACTTTCGTTGCAAGATCTGCGCCAAGCAGCTGGTCAGCCGCATCAGCTACGACGTGCACATGCTGCGCTTCCACTCCAACGAGGACGAGCTGAGCTTCGCCTGCAATCAGTGCTCGAAGCGCTTCTCCAAGCAGTTCCTGCTCACCATTCACTCGCGGGTGCATCAGCAGGAGCGGAAGGAGCAGTGCAAGCATTGCGATAGATCCTTTCGCACCGCCGTCGATCTGCGGCTGCACATGCGACGCACCCACGACCCCGCCTTCGTGCCCTTCATCTGCGACGCCTGCGGCGCCAAGTTCAAGACGAAGCAGAATCTGCTCGTCCACAAGCGCACCGTCCACCGCGAGGGCTCCCAGCTGCCGGAGGTGCAGTGCCAGGAGTGCCAGGTGTGGCTCTCCGACGAGAACAGTCTGCGCAAGCACATGTACATGCATCTGGACGCCGCCTCGCTGCGCCAGTGGAAGTGCGAGCAGTGTGGTCTGGAGAAGGGCTCGCGGGCGAAGCTGGCCGCGCACATACGCTACCATCATCCGAAGGAGTATCACAAGTGCACGCACTGCGGCAAGGAGTTCAAGAGCAGTCGGGGATTGGAGGAGCACACGGCCACCCATACGGGACAGGATCTGTACGAGTGCGCCTTCTGCGAGCGCACGTTCAAGAACTCGGGCAACATGCACAAGCACCGCAGGCAGATGCACGCCGCCCAGGTGGCCGCCCTGCAGCAGCAGAAGAAGGTGCGGCCCAGCAGGCGCAAGGACAAGGGCGATCTGCTCCTGGACGTCCTGGCCGCCGGGGGAAAGGAACTGAATCACGCCATGGGCGGGGCAGTAGGAGTGGGCGACATGAACGACTGA
Protein Sequence: MICRLCLDNAEHSVPIFDQEEQQQEEAPSHLAELIEKHLQLVLLPNDAVSKCLCTQCWQQLADFEQFCAMVMKKQLGLQQLKMEPFSEDDEDADTKAQILCEPEIDVSPAPADNEECNEIDGDASSKSSRSSSRMPSPIRRTMRPRAAAAPKSRVAKAKAKTKRHQEEADEDEEAEGDPESRSTNSREMDSYIALHGRLECCLCGGSDDDQFQSFAEMKRHFRSHHQSAGYVVCCQRRYKKRALYVDHLRMHNDPDYFRCKICAKQLVSRISYDVHMLRFHSNEDELSFACNQCSKRFSKQFLLTIHSRVHQQERKEQCKHCDRSFRTAVDLRLHMRRTHDPAFVPFICDACGAKFKTKQNLLVHKRTVHREGSQLPEVQCQECQVWLSDENSLRKHMYMHLDAASLRQWKCEQCGLEKGSRAKLAAHIRYHHPKEYHKCTHCGKEFKSSRGLEEHTATHTGQDLYECAFCERTFKNSGNMHKHRRQMHAAQVAALQQQKKVRPSRRKDKGDLLLDVLAAGGKELNHAMGGAVGVGDMND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00609377;
90% Identity: iTF_00537021;
80% Identity: -