Basic Information

Gene Symbol
srp
Assembly
GCA_035045365.1
Location
JAWNPC010000819.1:2977655-2990845[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7 8.1e+03 -3.3 0.0 3 11 187 195 187 197 0.88
2 2 2.9e-18 8.4e-15 54.3 1.5 1 35 925 958 925 959 0.97

Sequence Information

Coding Sequence
ATGACAAAAACTAGCAAAATAAAGGAGAAGGACAAGAACAGTGCAATGCCTAGGCTGCCTAGCAATTTGTTGACGAGTGCTGCCAAAATGAAGATCACCAAAGCGCTGTCCAATGCCAAGAAACAATCAGTGCAAAAGGGCGCAGGCAGCGACAAGGCAACAGGATCAaatgcagccacagccacagccacagcgacAGCTACAACCACAGCCATAGCATACGGTCAAACGCAACAGGCGGTCGCTGTGAAAGAGACGACAATATCGGCGCAGGAGAACGGCGACAGCGGCGACGCGCacaaagagcagcagcagcagcgacaacaacaactacagcaacaagcagcgacgtcgacgtcgccgttGTCGCCGCTTGCCACAGCGAATTTATCGTCGACATTTGAGTCGAAGGCTCACACATCAGTTGCCAGCGAAACAGCGAAGCAAACGGTTACTAccgcaacaacaccaacagcaacagctacagcagcagcagcaacaacaacaatcgcaaatattttagtttatgatGGAAACAGCGTAAGGCAGCAGCCGAAcagttgtgacgtcacaaataCTAAACTTGTTGCAGACGAAAGGGCTAATAGCAATCAAGATAAAGTCGAGCCCAAAGCCGAATGCGAAACGAAGCtagacacagcagcagcaataacaataacaacaagcgataaatattacaaattcgTCGATAAGTGCAAAAGTGAGATAAGTGATGAaaacgcaacagcaacaaacgcTGAAACTTTGCCGGTAATAGTGATAAATAGTAATCAGCAAAGCGACGCGAGTGAAAGTGttgacaacaaaatcaaaaCCAACTATGCTcatcagcaccagcaacagcaacagcaacaacagcagcaacaacaagcagagcaacagcaactctacgagcagcagcaatatctgcaacagcaactgctaacacaacaccaacaacagcagcagcagcagcagcagcaggagcaacagcagcaacacgccAGCTGGTTGGCATACAATAATTGTGCCTACGACTTAACTAGTAacagtgcaacagcagcagcagcagcggcggcagcagtaACACAACAGGATAAGAGCGAGTTTTATGCATTGGCTGCCTCGCAGCAATTGCTGGCGCATTTACCTTATCATCATACCCATTTGtacgagcagcagctgcatcagcagcaacaccacattaccaacatcagcaacagcacgGATTCCATAATGCGTAACAACTTTGCGCTTTATAGCGTTTATggaggcggcggtggcggtggcggcggggTGGCTAGTCCCACCACAcacgagcaacaacagctacagcaacacgTTGccgctgtggcagcagcagccgccaattCGGTAATAGCGCACACAACTCACACAACGCCAAACATTGATGAAGTCATACAGGATACGCTGAAGGACGAGTGCTTCGATGATAATCACAGCTCCAGCTATCACATGCTCACCGCTGTTCCCGATGTGCACGTTCTTAAGGAGGCCAATCCAGCTCTTTACTCTATGACGCATGATCAGTtgatgcaacagcaacaccaacaacatttgcatcagcatcaacaacatctccaccagcagcagcatcatcaacatcatcatcatcacaacAATTCGGCCAGTTCGGTGGGTGGCGATTCGCCTTCGCCCTCCCACACGCTCGCCGCACATGCCAGCGATGTGGCAACACTGCAAAGTTTCACACAACTAACAAGCGCGCAACCCAGCAGTGGACTGCATCGCGACAGCTACGGCAGCCTCTCGCCGGACCATGGCAGCTACTTTACGACACCGCTCAGCCCGGTGCTGCAAAGCAGCTCTGTCTATGCAAGTCCTTTACTCGCCTCGGCCGCCAATGGCATGCAGTATGGCATGCAAGCAATTGCCTcgcccacccacacacacgcccagctgcagcaacaacatcaccagcaccagcaacagcagcagcatcagcaacagcatcatcagcatcacaACTCAACGAGCAGCAGCCCTGGTCCAGTGGGTCTGCACCACACTGGCAGCTCGACGCTGTTAGACGATGGCTACGGCTCGCCCAAGAGTAGCCAcagcggcaatggcaacggcggTGGTGGCACCTTGCCCGCCTTTCAGCGCATTGCACCGGCCAGCGGTGGTGCGGGCTATGGCAACGGCGTGGCCAATGGCTCAGGCAGTGGGGCCGAACGGGCTGGATACGCATCGCTGGGCAATTATCGCACACACGGCGATGCCTGGAGTGGTCATTACGAACCAATTAGCTACGCGCCCACAACCACCGGCCAGGGGCAGCTGGGTGGTGCAGCAGTGACCAATGTGATACGCAACGGACGCGCCGTTTCTgccgcagcggcagcagcagccgctgtcgATGGTGCCGCCAGCGCTGTTGATCCTGCGCGCTTCCTAGCCAATGCCACTCATCTGTCCGCCTCGGCATCGCTAACAGCAACATTACTCGATGCCGATTTTTTCACTGAGGGGCGAGAATGTGTGAATTGTGTGGCCGCTGAATCAGGCGGGGATTTCTATAAGACCTTCCCATTTAATGTGACCGCCGGTAGCCGCAGTAAAAGCTCTACAAATGCCAACAGCGCTGCCGGCGTCGGCGCTGGCGTCGGCGCTAGCGCAGGCTCAACGTCGGTGACGACGTCCTCAGTGACTTCAACAGCGCTCGACGAGCAAGTTAGTCGCGCTAATTCGAGACGCTTGAGCGCTTCCCGACGTGCTGGCATGTCCTGTTCCAACTGCCAGACGAGCTACACATCGCTATGGCGCCGTAATCCTGGCGGCGAGCCCGTCTGCAATGCTTGCGGCCTGTACTTCAAGTTGCACAGTGTGGTCCGTCCGTTGACCATGAAGAAGGACACCATACAgAAACGTAAGCGAAAACCGAAGGGTACCAAAAGCGAAAAGTCGAAGAAGATGAGAGCCTCTCAGGCAGCTGGATTGGTGGCCAGCAATGCCAATGCCTGCCACAATGTGACAATGCAGGTGGAGTCGCATGGCCAGCAGCAAATGGATGTCACTGATGGAGAAATGAAACCAATTGCATATATGTCATACGCATCGCAGcaccagctacaacaacagcagcaactaaacACTGAGCCACATTCATCAGCGGCCAGCTCGCCGCAAAGCATGGCATCCTCCTCATTATCACCTAATGCTGCATCCCaccatcaacatcaacagcaacagcaacagcaacagcaacagcagcagcagcagcagcagctatgcgCTGGCCTGGACATGTCGCCCACATCATCCTATCAAATGTCGCCCATTaatatgcaacaacagcaacaatcatGCAGCATGCAACATTCACCTAGCACACCCACATCAGCCATGTCTCAGTCCATTTACTCCACGCCATCGCCCACGCAGCTTCataatagcagcaacagcagcaacaacaacaacaacaacaacaatatcaacaataacaacaattcattatttaatcataacaataacagcaacagcatcaatagtagcaatgaaaataataagcaAATTATACAGAAATATCTGCAAGCTCAGCAattgagcaacagcaacagcgatcATCAATTGTTGGCCCATCAGCAACTTATGCACCTGATGCCGAACTCCATtacggcggcagcagcagctgcagcagcagcggcggcggcggcggcaatcAGCACAGCGATCAAGTCGGAGGCGGTCACcaacagcaccaccaacaccaccaccagcagcaaacaattagctgccacaacaacaacaacacagaccACGGCATCGAACGCACTATCCTCgctgagcaacagcagcagcaacattatcAACCTCCAAAATCCCTATCAACAGCAGGCGCTTGGTCAGACGGAGATGCCCTTGTGTAAGTCGGCACTGAGTGGTCGCACTTCGTCGCCCTACTATATAAGTCATCTAGCTGAGGAGGAGCCACCGGCTGTCATAAAACTGGAGCAGTTGGAtcaccaccaacaacagcagcaacatcaacatcagcatcaacaccaacttcagcagcagcagcatcagcaacatgATGATATGTTGCTCAGTCGCACAACGTCCATTGATGAGCACTACGAATTGGCCGCATATcatcgccagcagcagcagcaacaacaacagcagcaacagcaacacgcactgcagcaacatgttgcactCAGTCAGCACGAGCACCAGATTGCCAGCTATGCGCTGCACGCAGccgcacagcagcaactgcatgAATTTGGACGCAAATATGGCGTTGAGCGCGAGACAATTGTTAAAATGGAATAA
Protein Sequence
MTKTSKIKEKDKNSAMPRLPSNLLTSAAKMKITKALSNAKKQSVQKGAGSDKATGSNAATATATATATTTAIAYGQTQQAVAVKETTISAQENGDSGDAHKEQQQQRQQQLQQQAATSTSPLSPLATANLSSTFESKAHTSVASETAKQTVTTATTPTATATAAAATTTIANILVYDGNSVRQQPNSCDVTNTKLVADERANSNQDKVEPKAECETKLDTAAAITITTSDKYYKFVDKCKSEISDENATATNAETLPVIVINSNQQSDASESVDNKIKTNYAHQHQQQQQQQQQQQQAEQQQLYEQQQYLQQQLLTQHQQQQQQQQQQEQQQQHASWLAYNNCAYDLTSNSATAAAAAAAAVTQQDKSEFYALAASQQLLAHLPYHHTHLYEQQLHQQQHHITNISNSTDSIMRNNFALYSVYGGGGGGGGGVASPTTHEQQQLQQHVAAVAAAAANSVIAHTTHTTPNIDEVIQDTLKDECFDDNHSSSYHMLTAVPDVHVLKEANPALYSMTHDQLMQQQHQQHLHQHQQHLHQQQHHQHHHHHNNSASSVGGDSPSPSHTLAAHASDVATLQSFTQLTSAQPSSGLHRDSYGSLSPDHGSYFTTPLSPVLQSSSVYASPLLASAANGMQYGMQAIASPTHTHAQLQQQHHQHQQQQQHQQQHHQHHNSTSSSPGPVGLHHTGSSTLLDDGYGSPKSSHSGNGNGGGGTLPAFQRIAPASGGAGYGNGVANGSGSGAERAGYASLGNYRTHGDAWSGHYEPISYAPTTTGQGQLGGAAVTNVIRNGRAVSAAAAAAAAVDGAASAVDPARFLANATHLSASASLTATLLDADFFTEGRECVNCVAAESGGDFYKTFPFNVTAGSRSKSSTNANSAAGVGAGVGASAGSTSVTTSSVTSTALDEQVSRANSRRLSASRRAGMSCSNCQTSYTSLWRRNPGGEPVCNACGLYFKLHSVVRPLTMKKDTIQKRKRKPKGTKSEKSKKMRASQAAGLVASNANACHNVTMQVESHGQQQMDVTDGEMKPIAYMSYASQHQLQQQQQLNTEPHSSAASSPQSMASSSLSPNAASHHQHQQQQQQQQQQQQQQQQLCAGLDMSPTSSYQMSPINMQQQQQSCSMQHSPSTPTSAMSQSIYSTPSPTQLHNSSNSSNNNNNNNNINNNNNSLFNHNNNSNSINSSNENNKQIIQKYLQAQQLSNSNSDHQLLAHQQLMHLMPNSITAAAAAAAAAAAAAAISTAIKSEAVTNSTTNTTTSSKQLAATTTTTQTTASNALSSLSNSSSNIINLQNPYQQQALGQTEMPLCKSALSGRTSSPYYISHLAEEEPPAVIKLEQLDHHQQQQQHQHQHQHQLQQQQHQQHDDMLLSRTTSIDEHYELAAYHRQQQQQQQQQQQQHALQQHVALSQHEHQIASYALHAAAQQQLHEFGRKYGVERETIVKME