Dnig012515.3
Basic Information
- Insect
- Drosophila nigricruria
- Gene Symbol
- srp
- Assembly
- GCA_037075265.1
- Location
- JBAMCI010000160.1:9655320-9668348[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-17 1.4e-13 50.3 3.7 1 34 867 899 867 901 0.97 2 2 3e-18 8.4e-15 54.2 1.5 1 35 996 1029 996 1030 0.97
Sequence Information
- Coding Sequence
- ATGACAAAAACTAGCAAAACTAAGGAGAAGGACAAGAACAGCTCAATGCCTAGACTGCCCAGCAATTTGTTGGCGAGTGCTGCCAAAATGAAGATCACCAAAGCCTTGGCCAATGCCAAGAAGCAATCAGTGCCAAAGGGAGCAGGCGGCGACAAGGCAACAGGatcaaatgcagcagcagtagcagcagcagctacagccgcagccacagccacaaccacagcaacagcaacagccataGCATACGGACAAGCGCAACAGGCGGTCGCTGTGAAAGAGACGACAATATCGGCGCAGGAGAACGGCGACGcgcacaagcagcagcagcagcagcagcagcggcaacaacaacagcaacaagcagcgacgtcgacgtcgccgttGTCGCCGCTTGCCACAGCGAATTTATCGTCGACATTTGAGTCGAAGGCTCACACATCAGTTGCCAGCGAAACAGCGAAGCAAACGGTTACTAccgcaacaacaccaacagcaatagcaacagctacatcagcagcagcagcagcagcagtaacaacaacaatcgcaaatattttagtttatgaTGGAAACAGCgtaaggcaacagcaacagcaacagcagcccaaTCGTTGTGACGTCACAAATACTAAAGTTGTTGCAGACGAAACGGCTAATAGCAATCAAGATAAAGTCGAGCCCAAAACCGAAAGCGAAACGAAGCTagacacagcagcagcagtaacaataacaacaggcgataaatattacaaaatcgTTGATAAGTGCAAAAGTGAGATAAGTGATGaaaacgcaacaacaacaaacgctGAAATTTTGCCGGTAGTAGTGATAAATAGTAATCAGCAAAGCGACGCGAGTGAAAGTGTtgacaacaaaatcaaaaCCAACTATgctcatcagcagcagcaacagcagcagcagcaacagcaacaacaacagcagcaacagcaacaagcagagcaacagcaaatctacgagcagcaacagtttctgcaacagcaactgttaacgcaacaccagcagcatcagcagcagcagcaacaggagcaacagcagcaacacgccAGTTGGTTGGCGTACAATAATTGCGCTTACGACTTGACTAGCAAcagtgcaacagcagcagcagcagcagcagcggcggcagcagcaacacagcAGGATAAGAGCGAGTTTTATGCATTGGCTGCCTCGCAGCAATTGCTGGCGCATTTGCCCTATCATCATACCCATTTGTacgaacagcagctgcagcagcagcaacagcacattagcaacagtagcaacagcacGGATTCCATAATGCGCAACAATTTTGCGCTTTATAGCGTGTATGGAGGCGGCAGTGGCTGCGGGGTGGGCAGTCCCACCACGCATGAGCAacatcagctgcagcaacacgTTGCcgctgtggcagcagcagccgctaaTTCGGTGATAGcgcacacaacacacacaacgCCAAACATTGATGAAGTCATACAGGATACGCTGAAGGACGAGTGCTTCGATGATAATCACAGCTCCAGCTATCATATGCTCACCGCTGTTTCCGATCTGCACGTGCTTAAGGAGGCCAATCCGGCTCTTTACTCCATGACGCATGATCAATtgatgcaacagcaacatcaacaacatctgcatcagcaacaacaacatctgcaccaccagcaacatcatcaacatcatcatcacaACAACTCGGCCAGTTCGGTGGGTGGCGACTCACCGTCGCCCTCCCACACGCTCGCCGCACATGCCAGCGATGTGGCAACGCTCCAAAGTTTCACACAACTAACTAGCGCGCAACCCAGCAGCGGACTGCATCGGGAGAGCTACGGCAGCCTCTCGCCGGAGCATGGCAGCTACTTTACCTCACAGCTCAGCCCGGTACTGCAAAGCAGCTCTGTCTATGCAAGTCCTTTACTCGCCTCGGCCGCCAATGGCATGCAGTACGGTATGCAAACAATTGCCTcgcccacccacacacacgcccagctgcagcaacaacatcaccaacatcagcaacagcagcaccagcagcagcagcaacaacagcaacagcatcatcagcatcacAACTCAACGAGCAGCAGTCCTGGCCCAGTGGGTCTGCACCACACTGGCAACTCGACGCTGCTGGACGATGGCTACGGCTCACCCAAGAGCAGCCAcagcggcaatggcaacggcggCGGTGGCACCTTGCCCGCCTTTCAGCGCATTGCACCGACCAGCGGTGGTGCGGGCTATGGCAACGGCGTGGCCAATGGCTCTGGCAGTGGGGCCGAACGGGCTGGATACGCATCGCTGGGCAATTATCGCACACACGGCGATGCCTGGAGTGGTCATTACGAACCAATTAGCTACGCGCCCACAACCGCCAGCCAGGGGCAGCTGGGTGGTGCAGCGGTGACCAATGTGATACGCAACGGACGCGCCGTTTCTGccgcagcggcggcagcagccgcTGTCGATGGTGCCGCCAGCGCTGTTGATCCTGCGCGCTTCCTAGCCAATGCCACTCATCTGTCCGCCTCGGCATCGCTAACAGCAACATTGCTCGATGCCGATTTTTTCACTGAGGGGCGAGAATGTGTGAATTGTGGTGCGATTTCGACCCCATTGTGGCGCCGCGATAACACGGGACACTATTTATGCAATGCGTGCGGCCTGTATCATAAAATGAACGGCATGAATCGGCCGTTAATTAAACAGCCTAGAAGATTGGTAAATGTCAACAACATGGCCGCTGAATCAGGCGGGGATTTCTATAAGACCTTCCCATTTAATGTGACCGCCGGTAGCCGCAGTAAAAGCTCTACAAATGCCAACAGCGCTGCCGGCGTCGGCGCTGGCGTCGGCGCTAGCGCAGGCTCAACGTCGGCGACGACGTCCTCAGTGACTTCAACGGCGCTCGACGAGCAAGTTAGTCGCGCTAATTCGAGACGCTTGAGCGCCTCCCGACGTGCTGGCATGTCCTGCTCCAACTGCCAGACGAGCTACACATCGCTATGGCGCCGTAATCCTGGCGGCGAGCCCGTCTGCAATGCCTGCGGCCTCTATTTCAAGTTGCACAGCGTGGTCCGTCCGTTGACCATGAAGAAGGACACCATACAGAAACGCAAGCGCAAACCAAAGGGCACCAAAAGCGAAAAGTCAAAGAAGCTGAGAGCCTCCCAGGCAGCTGGACTGGTGGCCAGCAATGCCAATGCCTGTCACAATGTGAACATGCAGCTTGAGGCGCATGGCCAGCAGCAAATGGATGTCACTGACGGAGAAATGAAACCAATTGCATATATGTCATACGCATCGCatcaacagctacaacaacagcaacaactaaacACTGAGCTACATTCATCAGCGGCCAGCTCGCCGCAAAGCATGGCATCCTCCTCATTATCACCTAATGCTGCATcccaacatcaacaacaacagcaacagcagcaacagcagcagcagctatgcGCTGGCCTGGACATGTCGCCCACATCATCCTATCAAATGTCGCCCATTaatatgcagcagcagcaacagcagcagcagcagcaacaatcatgcagcatgcagcattCACCTAGCACGCCCACATCAGCCATGTCTCAGTCCATTTACTCCACACCATCGCCCACGCAGCTTCataatagcagcaacagcagcaacaataacaacagcaacaacaacaacaacaacaacagcaacaacaataacaacaattcattatttaatcataacaataacagcatCAATAGTagcaatgaaaataataagcAAATTATACAGAAATATCTGCAAGCTCAACAattgagcaacagcagcagcgatcATCAATTGTTGGCACATCAGCAACTTATGCACCTGATGCCGAACTCCAttacggcggcagcagcagctgcagcagcagcggcggctgcggcggcggcaatcAGCACAGTGATCAAGTCGGAGGCGGTCACCAacagcaccaccaacaccaccaccagcagcaagCAATTagctgccacaacaacaacaacacagacCACGGCATCGAGCGCACAATCCTCgctgagcaacagcagcagcaacattatCAGCCTCCAAAATCCCTATCAGCAGCAGGCGCTTGGTCAGACGGAGATGCCCTTGTGTAAGTCGGCACTGAGTGGTCGCACTTCATCGCCCTACTATATAAGTCATCTGGCCGAGGAGGAGCAGCCGGCTATCATAAAACTGGAGCAGTTAGATcaccaccagcaacagcaacagcagcaacatcaacagcagcaacagcagcagcagcagcatcagcaacacgATGATATGTTGCTCAGCCGCTCAACGTCCATCGATGAGCACTACGAATTGGCCGCATATcatcgccagcagcagcagcaacaacaacagcagcaacagcaacatgcactgcagcaacatgttgcactTAGCCAGCACGAGCACCAGATTGCCAGCTATGCGCTGCACgcagccgcacaacaacaactgcatgAATTTGGGCGCAAATATGGCGTTGAGCGCGAGACAATTGTTAAAATGGAATAA
- Protein Sequence
- MTKTSKTKEKDKNSSMPRLPSNLLASAAKMKITKALANAKKQSVPKGAGGDKATGSNAAAVAAAATAAATATTTATATAIAYGQAQQAVAVKETTISAQENGDAHKQQQQQQQRQQQQQQAATSTSPLSPLATANLSSTFESKAHTSVASETAKQTVTTATTPTAIATATSAAAAAAVTTTIANILVYDGNSVRQQQQQQQPNRCDVTNTKVVADETANSNQDKVEPKTESETKLDTAAAVTITTGDKYYKIVDKCKSEISDENATTTNAEILPVVVINSNQQSDASESVDNKIKTNYAHQQQQQQQQQQQQQQQQQQQAEQQQIYEQQQFLQQQLLTQHQQHQQQQQQEQQQQHASWLAYNNCAYDLTSNSATAAAAAAAAAAATQQDKSEFYALAASQQLLAHLPYHHTHLYEQQLQQQQQHISNSSNSTDSIMRNNFALYSVYGGGSGCGVGSPTTHEQHQLQQHVAAVAAAAANSVIAHTTHTTPNIDEVIQDTLKDECFDDNHSSSYHMLTAVSDLHVLKEANPALYSMTHDQLMQQQHQQHLHQQQQHLHHQQHHQHHHHNNSASSVGGDSPSPSHTLAAHASDVATLQSFTQLTSAQPSSGLHRESYGSLSPEHGSYFTSQLSPVLQSSSVYASPLLASAANGMQYGMQTIASPTHTHAQLQQQHHQHQQQQHQQQQQQQQQHHQHHNSTSSSPGPVGLHHTGNSTLLDDGYGSPKSSHSGNGNGGGGTLPAFQRIAPTSGGAGYGNGVANGSGSGAERAGYASLGNYRTHGDAWSGHYEPISYAPTTASQGQLGGAAVTNVIRNGRAVSAAAAAAAAVDGAASAVDPARFLANATHLSASASLTATLLDADFFTEGRECVNCGAISTPLWRRDNTGHYLCNACGLYHKMNGMNRPLIKQPRRLVNVNNMAAESGGDFYKTFPFNVTAGSRSKSSTNANSAAGVGAGVGASAGSTSATTSSVTSTALDEQVSRANSRRLSASRRAGMSCSNCQTSYTSLWRRNPGGEPVCNACGLYFKLHSVVRPLTMKKDTIQKRKRKPKGTKSEKSKKLRASQAAGLVASNANACHNVNMQLEAHGQQQMDVTDGEMKPIAYMSYASHQQLQQQQQLNTELHSSAASSPQSMASSSLSPNAASQHQQQQQQQQQQQQLCAGLDMSPTSSYQMSPINMQQQQQQQQQQQSCSMQHSPSTPTSAMSQSIYSTPSPTQLHNSSNSSNNNNSNNNNNNNSNNNNNNSLFNHNNNSINSSNENNKQIIQKYLQAQQLSNSSSDHQLLAHQQLMHLMPNSITAAAAAAAAAAAAAAAISTVIKSEAVTNSTTNTTTSSKQLAATTTTTQTTASSAQSSLSNSSSNIISLQNPYQQQALGQTEMPLCKSALSGRTSSPYYISHLAEEEQPAIIKLEQLDHHQQQQQQQHQQQQQQQQQHQQHDDMLLSRSTSIDEHYELAAYHRQQQQQQQQQQQQHALQQHVALSQHEHQIASYALHAAAQQQLHEFGRKYGVERETIVKME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00532768;
- 90% Identity
- iTF_00573706; iTF_00510197; iTF_00568632;
- 80% Identity
- -