Basic Information

Gene Symbol
srp
Assembly
GCA_035046225.1
Location
JAWNOD010000494.1:120101-132528[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-18 6.6e-15 54.3 1.5 1 35 936 969 936 970 0.97

Sequence Information

Coding Sequence
ATGACAAAAACCAGCAAAGCTAAGGAGAAGGACAAGAACAGTGTCATGCCCAGGCTGCCCAGCAATTTGTTGGCGAGTGCTGCCAAAATGAAGATCACCAAGGCGCTGGCCAATGCCAAGAAGCAATCGGTGCAGAAGGGTAGCCTGTCGCCGCCTGGCGACAAGGCAACAGGATCaaatgccgcagcagcagcagcagccgcagccacagccacgacCACAGGCCCGGCCACAGCCATGGCATACGGCCAAGCGCAACAGGCGGTCGCTGTGAAAGAGACGACAATATCGGCGCAGGAGAACGGCGACAGCGGCGACgcgcacaagcagcagcagcagcagcagcggcaacaacaacagcaacaagcagcgacgtcgacgtcgccgttgTCGCCGCTTGCCACAGCGAATTTATCGTCGACATTTGAGTCGAAGGCTCACACATCAGTTGCCAGCGAAACAGCGAAGCAAACGGTTACTAccgcaacaacaccaacagcgacagctacagctacagctacagcagcagcaacaacaacaatcgcaaatattttagtttatgaTGGGAACAGCGTAaggcaagagcaacaacccAACAGCTGTGACGTCAGAAATACTAAAGTTATTGCAGGCGAAACGGCTCATAACATTGTAGACAAAGTCGAGCCCAAAACCGAAAGCGAATCGAAGCTagacacagcaacagcaatagcaaaaaGAACAAGcgataaatattacaaaatcgTTGATAAGTGCAAAAGTGAGATAAGTGATgaaaacacagcaacaacaacaacagacgcTGACACTTTGCCGGCAGTAGTGATAAATAGTAATCAGCAAAGCGACGCGAGTGAAAGTGTtgacaacaaaatcaaaaCCAACTAtgctcatcagcagcagcagcaacagcaacaacaacagcatcaacagcagcagcagcaacagcaccagcaacagcaacaacaggcagaacaacagcaaatctacgagcagcagcagtttctgcagcaacaactgctaacgcaacaccatcagcagcagcagcagcaacaggagcagcagcagcagcacgccaGTTGGTTGGCCTACAACAATTGCGCCTACGACTTAACTAGCAAcagtgcaacagcagcagcagcggcggcagcagcagcaacacaccAGGATAAGAGCGAGTTTTATGCATTGGCTGCCTCGCAGCAATTGCTGGCGCATTTGCCCTATCACCATACCCATTTgtacgagcagcagctgcagcagccgcagcagcacattagcaacagcagcagcagcacggacTCCATAATGCGCAACAATTTCGCGCTCTACAGCGTTtatggaggcggcggcggcggcggagtgGGCAGCAGTGTCGCGCCCACCACACATGAGcaacatcagctgcagcaacacgTTGccgctgtggcagcagcagccgccaacTCGGTGATAGcgcacacaacacacacaacgCCAAATATCGACGAGGTCATTCAGGACACGCTGAAGGACGAGTGCTTCGATGACAATCACAGCTCCAGCTACCACATGCTCACCGCTGTTTCCGATCTGCACGTGCTTAAGGAGGCCAACCCAGCCATTTACTCCATGACGCACGAGCAGTtgatgcagcagcaccaccaacaacacctgcatcagcaacaacaacatctgcatcagcagcaccatcagcaacatcatcatcacaaCAATTCAGCCAGCTCGGTAGGTGGCGATTCACCGTCGCCCTCCCACACGCTCGCCGCACATGCCAGCGATGTGGCAACGCTGCAAAGCTTCACACAACTAACAAGCGCACAGCCCAGCAGCGGACTGCATCGCGATAGCTACGGCAGCCTCTCGCCGGAGCATGCCAGCTACTTTACCACACAGCTCAGCCCTGTGCTGCAAAGCAGCTCTGTCTATGCAAGTCCCTTACTCGCCTCGGCCGCCAATGGCATGCAGTACGGCATGCAAGCAATCGCCtcgcccacccacacacacgcccagctgcagcaacagcatcaccaacaccagcagcagcagcaccagcatcagcagcagcagcaacagcatcatcagcatcacaATTCCACGAGCAGCAGTCCTGGCCCGGTGGGTCTGCACCACACTGGGAGCTCGACGCTGCTGGACGATGGCTACGGCTCACCCAAGAGCAGCCacagcggcaatggcaacggcggcgggGGCACCCTGCCCGCCTTTCAGCGTATTGCACCGGCCAGCGGTGGTGCTGGCTATGGCAACGGCGTGGCCAATGGCTCTGGCAGTGGGGCCGAACGGGCTGGATACGCATCGCTGGGCAATTATCGCACACACGGCGATGCCTGGAGTGGTCATTACGAACCAATTAGCTACGCGAACACAGCCACCGGCCAGGGGCAGCTGGGTGGTGCAGCGGTGACCAATGTGATACGCAACGGACGCGCCGTCTctgccgcagcggctgcagcagccgctgtcgATAGTGCTGCCAGCGCTGTTGATCCTGCGCGCTTCCTAGCCAATGCCACTCATCTGTCCGCCTCGGCTTCGCTAACAGCAATGGCCGCTGAATCAGGCGGGGATTTCTATAAGACCTTCCCATTTAATGTGACCGCCGGTAGCCGCAGTAAAAGCTCTACAAATGCCAAcagcgctgccggcgtcgGCGCTGGCGTCGGCGCTAGCGCAGGCTCAACGTCGGCGACGACGTCCTCAGTGACTTCAACGGCGCTCGACGAGCAAGTTAGTCGCGCTAATTCGAGACGCTTGAGCGCCTCCCGACGTGCTGGCATGTCCTGTTCGAACTGCCAGACGAGCTACACATCGCTATGGCGCCGTAATCCTGGCGGCGAGCCCGTCTGCAATGCCTGCGGCCTGTACTTCAAGCTGCACAGCGTAGTCCGTCCGCTGACCATGAAGAAGGACACCATACAGAAACGCAAGCGCAAGCCGAAGGGCACCAAGAGCGAaaagtcgaagaagatgaGAGCCTCGCAGGCAGCTGGGTTGGTGGGCAGCAATCCCAATGCCTGCCACAATGTGAACATGCAACTGGAGGCGCATAACCAGCAGCAAATGGACGTCACTGATGGAGAAATGAAATCAATCGCATATATGTCATACGCatcgcagcaacagctacaacagcagcaacaactaaacaCTGAGCTACATTCATCAGCGGCCAGCTCGCCGCAAAGCATGGCATCCTCCTCATTATCACCTAATGCTGCATcccaaaaccaacaacaacagcaacaacaacagcagcaacagcagcagcagcagcagctatgcGCTGGCCTGGACATGTCGCCCACTTCATCCTATCAAATGTCGCCCATCAAtatgcagcatcagcaacagcagcagcagcaatcatgcagcatgcagcattcACCTAGCACGCCCACATCAGCCATGTCACAGTCCATTTACTCGACGCCATCGCCCACGCAGCTCCATaatagcagcaatagcagcagcaacaacaacaacaataacaacagctcATTATTTaaccataacaacaacaacaacaacatcaataaCAGCAATGAAAATAACAAGCAAATTATACAGAAATATCTGCAAGCTCAGCAattgagcaacagcagcagcagcgatcaTCAGTTGttggcgcagcagcaacttatGCACCTGATGCCGAGCTCCAttacggcggcagcagcagctgcagcagcagcggcggcggcggcggcaatcaGCCCGGCGATCAAATCGGAGGCGGCCACcaacagcaccaccaacacctcaaccagcagcaagcaattagctgccacaacaacaacaacacagacCACGGCATCGAACGCACTATCCTCgctgagcaacagcagcagcaacattatcAGTCTGCAAAATCCCTATCAGCAGCAGGCGCTTGGTCAGACGGAGATGCCCTTGTGTAAGTCGGCACTGAGCGGTCGCACCTCGTCGCCCTACTATATGAGTCATCTGTCCGAGGAGGAGCAGCCGGCTATCAtaaagctggagcagctggatcaccatcaacagcagcagcaacatcagcagcaacagcatcaccagcagcaCGACGATATGTTGCTCAGTCGCTCAACGTCGATCGATGAGCACTACGAATTGGCCGCGTACCatcgtcagcagcagcagcaacaacagcaacatgcactgcagcaacatgttgcactgAGCCAGCAGGAGCACCAGATTGCCAGCTATGCGCTGCACGCAgccgcacagcagcaactgcatgaGTTCGGACGCAAGTATGGCGTTGAGCGCGAGACAATTGTTAAAATGGAATAA
Protein Sequence
MTKTSKAKEKDKNSVMPRLPSNLLASAAKMKITKALANAKKQSVQKGSLSPPGDKATGSNAAAAAAAAATATTTGPATAMAYGQAQQAVAVKETTISAQENGDSGDAHKQQQQQQRQQQQQQAATSTSPLSPLATANLSSTFESKAHTSVASETAKQTVTTATTPTATATATATAAATTTIANILVYDGNSVRQEQQPNSCDVRNTKVIAGETAHNIVDKVEPKTESESKLDTATAIAKRTSDKYYKIVDKCKSEISDENTATTTTDADTLPAVVINSNQQSDASESVDNKIKTNYAHQQQQQQQQQQHQQQQQQQHQQQQQQAEQQQIYEQQQFLQQQLLTQHHQQQQQQQEQQQQHASWLAYNNCAYDLTSNSATAAAAAAAAATHQDKSEFYALAASQQLLAHLPYHHTHLYEQQLQQPQQHISNSSSSTDSIMRNNFALYSVYGGGGGGGVGSSVAPTTHEQHQLQQHVAAVAAAAANSVIAHTTHTTPNIDEVIQDTLKDECFDDNHSSSYHMLTAVSDLHVLKEANPAIYSMTHEQLMQQHHQQHLHQQQQHLHQQHHQQHHHHNNSASSVGGDSPSPSHTLAAHASDVATLQSFTQLTSAQPSSGLHRDSYGSLSPEHASYFTTQLSPVLQSSSVYASPLLASAANGMQYGMQAIASPTHTHAQLQQQHHQHQQQQHQHQQQQQQHHQHHNSTSSSPGPVGLHHTGSSTLLDDGYGSPKSSHSGNGNGGGGTLPAFQRIAPASGGAGYGNGVANGSGSGAERAGYASLGNYRTHGDAWSGHYEPISYANTATGQGQLGGAAVTNVIRNGRAVSAAAAAAAAVDSAASAVDPARFLANATHLSASASLTAMAAESGGDFYKTFPFNVTAGSRSKSSTNANSAAGVGAGVGASAGSTSATTSSVTSTALDEQVSRANSRRLSASRRAGMSCSNCQTSYTSLWRRNPGGEPVCNACGLYFKLHSVVRPLTMKKDTIQKRKRKPKGTKSEKSKKMRASQAAGLVGSNPNACHNVNMQLEAHNQQQMDVTDGEMKSIAYMSYASQQQLQQQQQLNTELHSSAASSPQSMASSSLSPNAASQNQQQQQQQQQQQQQQQQLCAGLDMSPTSSYQMSPINMQHQQQQQQQSCSMQHSPSTPTSAMSQSIYSTPSPTQLHNSSNSSSNNNNNNNSSLFNHNNNNNNINNSNENNKQIIQKYLQAQQLSNSSSSDHQLLAQQQLMHLMPSSITAAAAAAAAAAAAAAISPAIKSEAATNSTTNTSTSSKQLAATTTTTQTTASNALSSLSNSSSNIISLQNPYQQQALGQTEMPLCKSALSGRTSSPYYMSHLSEEEQPAIIKLEQLDHHQQQQQHQQQQHHQQHDDMLLSRSTSIDEHYELAAYHRQQQQQQQQHALQQHVALSQQEHQIASYALHAAAQQQLHEFGRKYGVERETIVKME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00532768;
90% Identity
-
80% Identity
-