Dnav002613.1
Basic Information
- Insect
- Drosophila navojoa
- Gene Symbol
- srp
- Assembly
- GCA_001654015.2
- Location
- NW:1095293-1108605[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.73 1.8e+03 -1.9 0.2 2 10 203 211 203 212 0.90 2 2 2.1e-18 5.2e-15 54.2 1.5 1 35 973 1006 973 1007 0.97
Sequence Information
- Coding Sequence
- ATGACAAAGACTAGCAAGTCCAAGGAGAAGGACAAGAACAGTGCGTTGCCTAGAGTGCCCAGCAATTTGTTGGCGAGTGCTGCCAAAATGAAGATCACCAAAGCGCTGTCAAATGCCAAGAAGCAATCTGTGCAAAAGGGCTCAGGGGGCGACCAGGCAACAGGATCAAAtactgcagcagccacagccacagccacaggcaCGGGCACAGCCACGACCACAACTACAGCCATAGCATACGGCCAAGCGCAACAGGCGGTCGCTATGAAAGAGACGACAATATCGGCGCAGGAGAACGGCGACAGCGGCGAAgcgcacaagcagcagcagcagcgtcaacaacaacaacaacaacaacagcagcaagcagcgacgtcgacgtcgccgttgTCGCCGCTTGCCACAGCGAATTTATCGTCGACATTTGAGTCGAAGGCTCACACATCAGTTGCCAGCGAAACAGCGAAGCAAACGGTTACtaccgcaacaacagcaacagcaacagctacagcagccgtaacaacaacaatcgcaaatattttagtttatgaTGAGAACAGCgtaaggcaacagcaacagcaacaacaacaacagcagcagcacgccaGCAATTGTGACGTCACAAATACTAAAGTTGTTGCAGGCGAAACAGCTAATTGCAATCAAGATAAAGTCGAGCCTAAGACCGAAAGCGAAACGAAGCTAGAcacatcatcaacagcagcagcaataacaataacaacaagcgataaatattacaaaattgttgATAAGTGCAAAAGTGAGATAAGTGATGAaaacgcagcaacaacaaacgctgAAATTTTGCCGGTAGTAGTGATAAATAGTAATCAGCAAAGCGACGCAAGTGAAAGTGttgacaacaaaatcaaaagtgaATCAAATGAGCAAGAacaaactgcaacagcaacattgacaacagcaacaactgccgAATTGCCGCTACATTATCGCGGCCTAAACAACTCGGTGATCATAGCCAACTATgctcatcagcaacaacagcagcagcagcaacagcaacagcaacaacagcaagcagagcaacagcaaatctacgagcagcaacagtttctgcaacagcaattgctaacccaacagcaacaccaccagcagcaacaggagcaacagctgcaacacgCCAATTGGTTAGCGTACAACAATTGTGCCTACGACTTAACTAGCAacagtgcaacagcagcggcagcagcagcggcggcggcagcagcaacacaacagGATAAAAGCGAGTTTTATGCATTGGCGGCCTCACAGCAATTGCTCGCACATCTACCCTATCATCATACACATTTgtacgagcagcagctgcagcagcagcaacatcacattagcaacagcagcaacagcacggATTCCATAATGCGCAACAATTTTACGCTTTACAGCGCTTatggcggcggcggaggtggtggtggtggcggtggcgttGGCAGTCCCACCACACACGAGcaacatcagctgcagcaacacgTTGCtgcggtggcagcagcagccgccaatTCGGTAATCGcgcacacaacacacacaacgCCAAATATTGACGAAGTTATACAGGATACGCTGAAGGACGAGTGCTTCGATGATAATCACAGCTCCAGCTACCACATGCTGACCGCTGTCTCCGATATTCACGTTCTCAAGGAGGGCAATCCAAATCTTTACTCTATGACGCACGACCAGTtgatgcaacagcaacatctgcatcagcaacaccagcatctgcaccagcagcagcatcatcagcatcatcatcacaaCAATTCGGCCAGTTCGGTGGGTGGCGATTCGCCGTCGCCCTCCCACACGCTCGCCACACATGCCAGCGATGTGGCAACGCTGCAAAGCTTCACACAACTAACGAGCGCGCAGCCCAGCAGCGGACTGCATCGCGATAGCTACGGCAGCCTCTCGCCGGAGCACGGCAACTACTTTACCACACAGCTCAGCCCGGTGCTGCAAAGCAGCTCTGTCTATGCAAGTCCATTACTCGCTTCGGCCGCCAATGGCATGCAGTATGGCATGCAAACAATTTCCtcgcccactcacacacacgcccagctgcagcaacaacatcaccaacaccagcaacagcagcatcagcaacatcagcagcagcagcagcagcagcaacaacaacagcaacaacatcatcaacatcacAACTCATCGAGCAACAGTCCTGGTCCAGTGGGTCTGCACCACACTGGCAACTCCACGCTGCTGGACGATGGCTACGGCTCGCCCAAGAGTAGCCacagcggcaatggcaacggcggcGGTGGTACTTTGCCCGCCTTTCAGCGCATTGCGCCGGCCAGCGGTGGTGCGGGCTATGGCAACGGCGTGGCCAATGGCTCTGGCAGTGGGGCCGAACGGGCTGGATACGCATCGCTAGGCAATTATCGCACACACGGCGATGCCTGGAGTGGTCATTACGAACCAATTAGCTACGCGCCCACAACCGCCGGCCAGGGCCAGCTGGGTGGTGCAGCGGTGACCAATGTGATACGCAACGGACGCGCCGTTTCTGccgcggcggcagcagcagccgctgtcgATGGTGCTGCCAGCGCTGTTGATCCTGCGCGCTTCCTAGCCAATGCCACTCATCTGTCCGCCTCGGCATCGCTAACAGCAATGGCCGCTGAATCAGGCGGGGATTTCTATAAGACCTTCCCATTTAATGTGACCGCCGGTAGCCGCAGTAAAAGCTCAACAAATGCCAACAGCGCTGCCGGCGTCGGCGCTGGCGTCGGCGCTAGCGCAGGCTCAACGTCGGCGACGACGTCCTCAGTGACTTCAACGGCGCTCGACGAGCAAGTTAGTCGCGCTAATTCGAGACGCTTGAGCGCCTCCCGAAGAGCTGGCATGTCCTGCTCCAATTGCCAGACGAGCTACACATCGCTATGGCGCCGTAATCCTGGCGGCGAGCCCGTCTGCAATGCCTGCGGCCTTTACTTCAAGTTGCACAGCGTGGTCCGTCCGTTGACCATGAAGAAGGACACCATACAGAAACGCAAGCGCAAGCCGAAGGGTACTAAAAGCGAAAAGTCAAAGAAGATGAGAGCCTCGCAGGCAGCTGGATTGGTGGCTAGCAATGCCAATGCCTGTCACAACGTAAGCATGCAGCTGGAGGCGCatgggcagcagcaaatggatGTCACTGATGGAGaaatgaaatcaattgcTTATATGTCATACGCatcgcagcaacagctacaacagcagcaacaactaaacaCTGAGCTACATTCATCTGCGGCCAGCTCGCCGCAAAGCATGGCATCCTCCTCATTATCACCTAATGCTGCATcccaacatcaacaacaacagcagcagcagcagcaacagcagcagcagcagcagctatgctCTGGGCTGGACATGTCGCCCACATCATCCTATCAAATGTCGCCCATTAatatgcagcaacagcagcaatcatgcagcatgcagcattcACCTAGCACGCCTACATCAGCCATGTCTCAGTCCATTTACTCCACGCCATCGCCAACACAGCTTCATaatagtagcaacagcagcaacaacaacaacaacaacagcaacagccacaacaataacaactcattatttaatcataacaataacagcattAATAGCAgcaatgaaaataacaaacaaattattcagAAATATCTGCAAGCTCAACAattgagcaacagcagcagcgatcaTCAATTGTTGGCACATCAGCAACTTATGCACCTGATGCCGAACTCCAttacggcggcagcagcagctgtagcagcagcaacggcggcggcggcggcaatcAGCACAGCGATCAAATCGGAGGCGGTcaccaacagcaccaccaacaccaccaccagcagcaagcaattggctgccacaacaacaacaacacagacCACGGCATCGAACGCACTATCCTCtctgagcaacagcagcagcaacattatcAGCCTCCAAAATCCCTATCAACAGCAGGCGCTTGGTCAGACGGAGATGCCCTTGTGTAAGTCGGCACTGAGTGGTCGTACCACGTCGCCCTACTATATAGGTCACATAGCCGAGGAGGAGCAACCGACTATCATAAAACTGGAGCAGTTGGatcaccaccagcaacagcaacagcaacagcaacagcagcaacatcaacaacagcagcggcagcaacacgATGATATGTTGCTCAGCCGTTCAACGTCCATCGATGAGCATTATGAATTGGCCGCATATcatcgtcagcagcagcagcaacagcaacagcaacagcagcagcaacagcagcaacagcagcacgcacagcagcaacatgttgcacttAGCCAGCACGAGCAACAGATTGCCAGCTATGCACTGCACGCAGCcgcacaacagcaactccaTGAATTTGGTCGTAAATATGGCGTTGAGCGCGAGACAATTGTTAAGATGGAATAA
- Protein Sequence
- MTKTSKSKEKDKNSALPRVPSNLLASAAKMKITKALSNAKKQSVQKGSGGDQATGSNTAAATATATGTGTATTTTTAIAYGQAQQAVAMKETTISAQENGDSGEAHKQQQQRQQQQQQQQQQAATSTSPLSPLATANLSSTFESKAHTSVASETAKQTVTTATTATATATAAVTTTIANILVYDENSVRQQQQQQQQQQQHASNCDVTNTKVVAGETANCNQDKVEPKTESETKLDTSSTAAAITITTSDKYYKIVDKCKSEISDENAATTNAEILPVVVINSNQQSDASESVDNKIKSESNEQEQTATATLTTATTAELPLHYRGLNNSVIIANYAHQQQQQQQQQQQQQQQAEQQQIYEQQQFLQQQLLTQQQHHQQQQEQQLQHANWLAYNNCAYDLTSNSATAAAAAAAAAAATQQDKSEFYALAASQQLLAHLPYHHTHLYEQQLQQQQHHISNSSNSTDSIMRNNFTLYSAYGGGGGGGGGGGVGSPTTHEQHQLQQHVAAVAAAAANSVIAHTTHTTPNIDEVIQDTLKDECFDDNHSSSYHMLTAVSDIHVLKEGNPNLYSMTHDQLMQQQHLHQQHQHLHQQQHHQHHHHNNSASSVGGDSPSPSHTLATHASDVATLQSFTQLTSAQPSSGLHRDSYGSLSPEHGNYFTTQLSPVLQSSSVYASPLLASAANGMQYGMQTISSPTHTHAQLQQQHHQHQQQQHQQHQQQQQQQQQQQQQHHQHHNSSSNSPGPVGLHHTGNSTLLDDGYGSPKSSHSGNGNGGGGTLPAFQRIAPASGGAGYGNGVANGSGSGAERAGYASLGNYRTHGDAWSGHYEPISYAPTTAGQGQLGGAAVTNVIRNGRAVSAAAAAAAAVDGAASAVDPARFLANATHLSASASLTAMAAESGGDFYKTFPFNVTAGSRSKSSTNANSAAGVGAGVGASAGSTSATTSSVTSTALDEQVSRANSRRLSASRRAGMSCSNCQTSYTSLWRRNPGGEPVCNACGLYFKLHSVVRPLTMKKDTIQKRKRKPKGTKSEKSKKMRASQAAGLVASNANACHNVSMQLEAHGQQQMDVTDGEMKSIAYMSYASQQQLQQQQQLNTELHSSAASSPQSMASSSLSPNAASQHQQQQQQQQQQQQQQQLCSGLDMSPTSSYQMSPINMQQQQQSCSMQHSPSTPTSAMSQSIYSTPSPTQLHNSSNSSNNNNNNSNSHNNNNSLFNHNNNSINSSNENNKQIIQKYLQAQQLSNSSSDHQLLAHQQLMHLMPNSITAAAAAVAAATAAAAAISTAIKSEAVTNSTTNTTTSSKQLAATTTTTQTTASNALSSLSNSSSNIISLQNPYQQQALGQTEMPLCKSALSGRTTSPYYIGHIAEEEQPTIIKLEQLDHHQQQQQQQQQQQHQQQQRQQHDDMLLSRSTSIDEHYELAAYHRQQQQQQQQQQQQQQQQQQHAQQQHVALSQHEQQIASYALHAAAQQQLHEFGRKYGVERETIVKME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00532768;
- 90% Identity
- iTF_00479837;
- 80% Identity
- -