Basic Information

Gene Symbol
srp
Assembly
GCA_035045555.1
Location
JAWNOX010000009.1:3954544-3967299[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.1e-17 1.3e-13 50.3 3.7 1 34 866 898 866 900 0.97
2 3 2.5e-19 6.4e-16 57.7 1.9 1 35 995 1028 995 1029 0.97
3 3 7 1.8e+04 -8.4 6.5 2 10 1319 1327 1319 1328 0.85

Sequence Information

Coding Sequence
ATGACAAAAACTAGCAAGACAAAGGAGAAGGACAAGAACAATTCAATGCCTAGACTGCCCAGCAATTTGTTGGCGAGTGCTGCCAAAATGAAGATCACCAAAGCGTTGGCCAATGCCAAGAAGCAAACGGTGCAAAAGGGCGCAGGCAGCGACAAGGCAACAGGAtcaaatgcagctgcagccactgccgccgccgcagcagcagcagcagcagctacagccacaaccacaaccacagcaacagccataGCATACGGCCAAGCGCAACAGGCGATCGCTGTGAAAGAGACGACAATATCGGCACAGGAGAACGgcgacacacacaaacagcagcagcagcggcaacaacaacagccacaagcagcgacgtcgacgtcgccgttGTCGCCGCTTGCCACAGCGAATTTATCGTCGACATTTGAGTCGAAGGCTCACACATCAGTTGCCAGCGAAACAGCGAAGCAAGCGGTTACtaccgcaacaacagcaacagcaacagcaacagctacaccagcagtaacaacaacaatcgcaaatattttagtttatgaTGGGAACAGCGTAAGGCAACAGTCCCACAGTTGTGACGTCACAAATACTAAAGTTGTTGCAGACGAAGCGGCTAATAGCAATCAAGATAAAGTCGAACCCAAAACCGAAAGCGAAACGAAGCTAGACACAGCAGcaccaataacaataacaacaagcgataaatattacaaaatcgTTGATAAGTGCAAAAGTGAGATAAGTGATGaaaacacagcagcaacaacaacaacaacaacaagtgctgAAATTTTGCCGGTAGTAGTGATAAATAGTAATCAGCAAAGCGACGCGAGTGAAAGTGttgacaacaaaatcaaaaCCAACTatgctcatcatcatcagcatcagcaacagcaacaacagcaacatcaacagcagcagcagcagcaacaacaagtggagcaacagcaaatctacgagcagcagcagtttctgcaacagcaactgctaacgcaacaccagcaacaccagcaacagcaacagcaggaacaacagcagcaacacgccAGCTGGTTGGCGTACAACAATTGTGCCTACGACTTAACTAGCAacagtgcaacagcagcagcagcagcagcagcggcggcagcagcaacacatcAGGATAAGAGCGAGTTTTATGCCTTGGCTGCCTCGCAGCAATTGCTGGCGCACTTACCCTATCATCATACACATTTgtacgagcagcagctgcagcagcagcagcagcaccacattagcaacagtagcaacagcacGGATTCCATAATGCGCAACAATTTTGCGCTTTATAGCGTTTATggaggcggtggtggtggcggcgtgGGCAGTCCCACGACACACGACCAacatcagctgcagcaacacgttgccgctgtggcagcagcagccgccaatTCGGTAATAgcgcacacaacacacacaactcCAAACATTGATGAAGTCATACAGGATACGCTGAAGGACGAGTGCTTCGATGACAATCACAGCTCCAGCTATCACATGCTCACCTCCGTTTCCGATCTCCATGTGCTCAAGGAGGCCAATCCAGCTCTTTACTCTATGACGCATGATCaattgctgcaacagcaacatcaacaacatctgcaccagcaacaacagcacctgcaccaccagcagcatcatcaacatcatcatcacaaCAACTCAGCCAGTTCGGTGGGTGGCGATTCGCCGTCGCCCTCCCACACGCTCGCTGCACACGCCAGTGATGTGGCAACGCTCCAGAGCTTCACACAACTAACCAGCGCACAACCCAGCAGCGGACTGCATCGGGACAGCTACGGCAGCCTCTCGCCGGAGCACGGCAGCTACTTCACTTCACAGCTCAGCCCGGTACTGCAAAGCAGCTCGGTCTATGCAAGTCCTTTACTCGCCTCGGCCGCCAACGGCATGCAGTATGGCATGCAATCAATTGCTtcgcccacccacacacacgcccagctgcagcagcaacatcaccaacaccagcaacagcagcatcagcagcagcagcagcagcagcagcagcagcatcatcagcatcacaACTCAACTAGCAGCAGTCCTGGCCCAGTGGGTCTGCACCACACTGGCAACTCGACGCTGATGGACGATGACTACGGCTCACCCAAGAGCAGCCacagcggcaatggcaacggcggcGGTGGCACCTTGCCCGCCTTCCAGCGGATTGCACCGACCAGCGGTGGGGCGGGCTATGGCAACGGCGTGGCCAATGGCTCTGGCAGTGGGGCGGAACGGGCTGGATACGCAACACTGGGCAATTATCGCACACACGGCGATGCCTGGAGTGGTCATTACGAACCAATTAGCTACGCGCCCACAGCCACCGGCCAGGGGCAGCTGGGTGGTGCAGCGGTGACCAATGTGATACGCAACGGACGCGCCGTTTCTGCCGCAGCggccgctgcagccgctgtCGATGGTGCCGCCAGCGCTGTAGATCCTGCGCGCTTCCTAGCCAACGCAACTCATCTGTCCGCCTCGGCATCCCTAACAGCAACATTGCTCGATGCCGATTTTTTCACTGAGGGGCGAGAATGTGTGAATTGTGGTGCGATTTCGACCCCATTGTGGCGCCGCGATAACACGGGACACTATTTATGCAATGCGTGCGGCCTGTATCATAAAATGAACGGCATGAATCGGCCGTTAATTAAACAGCCCAGAAGATTGGTAAATGTCAACAACATGGCCGCTGAATCAGGCGGGGATTTCTATAAGACCTTCCCATTTAATGTGACCGCCGGTAGCCGCAGTAAAAGCTCTACAAATGCCAACAGCGCTGCCGGCGTCGGCGCTGGCGTCGGCGCTAACGCAGGCTCAACGTCGGCGACGACGTCCTCAGTGACTTCAACGGTGCTCGACGAGCAAGTTAGTCGCGCTAATTCGAGACGCTTGAGCGCTTCCCGACGTGCTGGCATGTCCTGCTCCAACTGCCAGACGAGCTACACATCGCTCTGGCGCCGTAATCCTAACGGCGAGCCCGTCTGCAATGCCTGCGGCCTCTACTTCAAGCTGCACAGTGTGGTCCGTCCATTGACCATGAAGAAGGACACGATACAGAAACGCAAGCGCAAACCGAAGGGTACCAAAAGCGAAaagtcgaagaagatgagagcCTCCCAGGCAGCTGCACTGGTGGCCAGCAATGCCAACACCTGCCACAATGTGAACATGCAGCTGGAGGCGCATGGCCAGCAGCAAATGGATGTCACTGATGGAGAAATGAAACCAATCGCATATATGTCATACGCatcgcagcaacagctacaacagcagcaacaactaaacACAGAGCTACATTCATCGGCGGCCAGCTCGCCGCAAAGCATGGCATCCTCCTCATTATCACCTAATGCTGCATcccaacatcagcagcaacatcaacagcagcagcagcagcagcagcagcaacagcagcagcagcagcagcagcagcagctatgcGCTGGCCTGGACATGTCGCCCACATCATCCTATCAAATGTCGCCCATTaatatgcaacagcagcagcagcaacaatcatGCAGCATGCAACATTCACCTAGCACGCCCACATCAGCCATGTCTCAGTCCATTTACTCCACGCCATCGCCCACGCAGCTtcataacagcagcaacagcagcaacaacaacagcaacagcaacaacaataacaacaattcattatttaatcataacaataacaacatcaaTAGTagcaatgaaaataataaacaaattattcagAAATATCTGCAAGCCCAAcaattgagcagcagcagcagcgatcaTCAATTGTTGGCACATCAGCAACTTATGCACCTGATGCCGAGCTCCAttacggcggcagcagcagctgcagcagcagcggcggctgcggcggcAATCAGCACAGCGATCAAGTCGGAGGCGGTCACCAActgcaccaccaacaccaccaccagcagcaagcAATTagctgccacaacaacaacaacacagaccACGGCATCGAACGCACTATCCTCgctgagcaacagcaacagcaacattatcAGCCTGCAAAATCCCTATCAGCAGCAGGCGCTTGGTCAGACGGAGATGCCCTTGTGTAAGTCGGCGCTGAGTGGTCGCACCTCGTCGCCCTACTATATGAGTCATCTAACCGAGGAGGAGCAGCCGGCTATCATAAAACTGGAGCAGTTGGAtcaccaccaacaacagcagcaacatcagcaacatcagcaacagcagcagcagcaacagcaacagcagcagcaccagcaacacgATGATATGCTGCTAAGTCGCTCAACGTCCATCGATGAGCACTACGAATTGGCTGCCTATcatcgccagcagcagcagcaacaacagcagcaacagcagcacgcactgcagcaacatgttgctctCAGCCAGCACGAGCACCAGATTGCCAGCTATGCGCTGCACGCAGccgcacagcagcaactgcatgaATTCGGACGCAAATATGGCGTTGAGCGCGAGACAATTGTTAAAATGGAATAA
Protein Sequence
MTKTSKTKEKDKNNSMPRLPSNLLASAAKMKITKALANAKKQTVQKGAGSDKATGSNAAAATAAAAAAAAAATATTTTTATAIAYGQAQQAIAVKETTISAQENGDTHKQQQQRQQQQPQAATSTSPLSPLATANLSSTFESKAHTSVASETAKQAVTTATTATATATATPAVTTTIANILVYDGNSVRQQSHSCDVTNTKVVADEAANSNQDKVEPKTESETKLDTAAPITITTSDKYYKIVDKCKSEISDENTAATTTTTTSAEILPVVVINSNQQSDASESVDNKIKTNYAHHHQHQQQQQQQHQQQQQQQQQVEQQQIYEQQQFLQQQLLTQHQQHQQQQQQEQQQQHASWLAYNNCAYDLTSNSATAAAAAAAAAAATHQDKSEFYALAASQQLLAHLPYHHTHLYEQQLQQQQQHHISNSSNSTDSIMRNNFALYSVYGGGGGGGVGSPTTHDQHQLQQHVAAVAAAAANSVIAHTTHTTPNIDEVIQDTLKDECFDDNHSSSYHMLTSVSDLHVLKEANPALYSMTHDQLLQQQHQQHLHQQQQHLHHQQHHQHHHHNNSASSVGGDSPSPSHTLAAHASDVATLQSFTQLTSAQPSSGLHRDSYGSLSPEHGSYFTSQLSPVLQSSSVYASPLLASAANGMQYGMQSIASPTHTHAQLQQQHHQHQQQQHQQQQQQQQQQHHQHHNSTSSSPGPVGLHHTGNSTLMDDDYGSPKSSHSGNGNGGGGTLPAFQRIAPTSGGAGYGNGVANGSGSGAERAGYATLGNYRTHGDAWSGHYEPISYAPTATGQGQLGGAAVTNVIRNGRAVSAAAAAAAAVDGAASAVDPARFLANATHLSASASLTATLLDADFFTEGRECVNCGAISTPLWRRDNTGHYLCNACGLYHKMNGMNRPLIKQPRRLVNVNNMAAESGGDFYKTFPFNVTAGSRSKSSTNANSAAGVGAGVGANAGSTSATTSSVTSTVLDEQVSRANSRRLSASRRAGMSCSNCQTSYTSLWRRNPNGEPVCNACGLYFKLHSVVRPLTMKKDTIQKRKRKPKGTKSEKSKKMRASQAAALVASNANTCHNVNMQLEAHGQQQMDVTDGEMKPIAYMSYASQQQLQQQQQLNTELHSSAASSPQSMASSSLSPNAASQHQQQHQQQQQQQQQQQQQQQQQQQLCAGLDMSPTSSYQMSPINMQQQQQQQSCSMQHSPSTPTSAMSQSIYSTPSPTQLHNSSNSSNNNSNSNNNNNNSLFNHNNNNINSSNENNKQIIQKYLQAQQLSSSSSDHQLLAHQQLMHLMPSSITAAAAAAAAAAAAAAISTAIKSEAVTNCTTNTTTSSKQLAATTTTTQTTASNALSSLSNSNSNIISLQNPYQQQALGQTEMPLCKSALSGRTSSPYYMSHLTEEEQPAIIKLEQLDHHQQQQQHQQHQQQQQQQQQQQQHQQHDDMLLSRSTSIDEHYELAAYHRQQQQQQQQQQQHALQQHVALSQHEHQIASYALHAAAQQQLHEFGRKYGVERETIVKME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00532768;
90% Identity
iTF_00559878;
80% Identity
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