Basic Information

Gene Symbol
Hivep2
Assembly
GCA_004354385.1
Location
NW:21878710-21930776[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.0002 0.011 15.7 0.3 1 23 448 470 448 470 0.98
2 8 0.0003 0.017 15.1 2.9 1 21 476 496 476 500 0.89
3 8 0.027 1.5 9.0 0.1 1 19 1143 1161 1143 1164 0.93
4 8 2.7e-06 0.00015 21.6 2.0 1 23 1914 1936 1914 1936 0.99
5 8 1.1e-05 0.00065 19.6 5.3 1 23 1942 1966 1942 1966 0.92
6 8 2.1e-05 0.0012 18.8 3.5 2 23 2432 2453 2432 2453 0.97
7 8 0.00078 0.044 13.8 1.2 1 23 2459 2483 2459 2483 0.91
8 8 0.0025 0.14 12.2 2.7 1 23 2504 2528 2504 2528 0.92

Sequence Information

Coding Sequence
ATGGCGCGACGCAAGGGCAGCGGACGTGGAAAATCCACAGTGAATTCGCGTAAAAATGCTTTGGAAACGTCAcgcgaaaaattaaaagatgaGCCCGTGTCAAACACATCGCAGGCGAGTAAATTTGATGATACTATggaaaatgcaacaacaaacacagcgAAGCATTataaaacagcagcaacaaacagcaaacaatacaagaacaacaacaaagtgagCAGCACGCGtcgtgcaacagcagcagcggcagccgcgtcagcagcagcggcagcaacaacaacagcagcaaaaactaaGAAAGAAACATATCGCAGCAGCAACGaaattgcagcaacagcaacaccgaaatcaaacaaagtcaacaacaaaacaacagcagcaacaattacaactacagcagccgcagcagcagcagcagcagcagcaacaacagcgacaacaacagtaacaacagcaatcagTACAAGCACTCAAGAGTTGTCAGCTCAAGTTGTcgagagcaacagcagcaacatcaacaataataacaacaacaataacaacaacaacaacaaccaccacagTGATAATAGTATTAGTGAgaataattatgaatttaagGCTAGAGATAAAGCGAACATAAGTGATAGCAAAATGACGCTACAGCATGTGGCAAGTAACGCATCGGGCCCAGttgccacaacaaccacaacgaatCATGTGGTGCCAGTCAATGCGACGGCAACAGTCAGCGATGAAGCAACcgcagctgcaacaattgtCGATTgggcaaatacaacaacaaatttgcgATATTTGCACAAGAAATTCAAGCGGTTGGCAAGCACCACCGAAGCAGAGGCTGTTGATGTGGTGCGCACCACATCCTTGTCATCTAATAGCTCCATAtcgccaccaccaccagcagcagcaacaacaacaattgcagcagcggcagcaacaacagttgtgCCAGTGTCGATGTCATTGGCGGTGCCATTGCTCAATGGTCATGTGACGACGACAAATGAATTCAGtgccaattttataaatgaagagagcaacaacaacaacaacagcagcagcagtaaaaATGTTGCTGGTGCGCCAAGAACGCGTACACcgctcagcaacaacaacagcaacagtaactaTGCCAGCAATGCAACATTATCGCCAGCAACATTCGCACAGCATCAGCAATCAACGCAgccaacaacatcaacaacagcagcagcagcagcagcagcaacaacaactgttaccgcaacagcaacactgcAAATACAGCCGCAACaagctgctgcaactgcaacaacatcagcaaccacaacaacaccTGCCGAGAAACCGGGACGTTATATATGTCCCTATTGCAATATGCCATGTGCCAAGCCATCGGTGTTGCAGAAGCACATACGTGCGCATACAAACGAACGCCCGTATCCCTGTGACACCTGTGGCATTGCCTTCAAAACGAAGAGCAATCTCTATAAACACTGCCGTTCCCGTTCCCATGCGGCACGAATGCGGGGCATCGATGTGCCCGCCCATGAGGCGGATGGTCTGTCCGATCAGGATGGCGATGGTGAACTGAGCAACAGCAGTTCCGAGCTCCTAAGTGTGGAAATTCTGAGTCGTGCGGAGTCGCCTTATGATGAGCCCATGCCATCGCCAACGCCATCTCCCTCAACATTGTCGGCGGCGAAGAGCGCGTACCTGCAACAGCCGCCGTTGCCGCAGCATATGCAACAGTTGCCGCTGGGTTCGCCGGCAGCAGGCACATTGCCGCCGCCAACGGCAGATACGTTGCACTCGGCAACGGCGCAACATCGGCAATCGATTGATTACAAGCCATATAAGCCCAAGTTTCATAATGCAGCGCTTTATGCgcctggcagcagcagcaaggaGCAGCAAGTTCAACTGCAggtgctgcaacagcaacagcaggcattacagcagcagcagcaacaacagcaacaacaacagcagcaacatcaacagcagaagCTGGCGTCGCAGCAACCAACATTGGCACATCCAACACTCTCGCCGAGCACCCAGTTGAAGCTCAACAATCACATCAACTCACATCAGATGCAACTGCAGCtacaacatcagcatcagcagcaccagcagcaacaacagctacacgCACAGCAATCATTGCTGCTAGCGGCAGCTGCTAATCCAGCGGCATTGACGGGACTACCACCACCACCGACCATGCCCACAAGTGTCTACTACTTGGGGCAGCCGCAGTACTTTAACCCAGCTACCGCAGCGTTGCATCATCAGGCGTTAGCTTTTCAGCAAATGCAGTTCCAGCAACACTTCCAGcttcagcagcagcaccaacaacagcagcagcagcagcagcagcaacaccagcaacagcaacactcgCCGCTGCTGAAGGCGCCTACGCATCCACCGCAACCAcagccacaaccacaaccacagctGCAACCACTACCACCACAGCCATTGCCACAACCTCAGCAGCTGGTGCGTTCAAACAGTCAACAGGCGtcgataacagcaacaaccgccGCCGTGTTGCCAgcccctgccacgcccacgcctcCAGCCAACTTGAGCAGCTTTGCCAGCGCCAGCGGTGGCATGCAAGTGAATGTGGAGAAGGTGCAGGAGCACATCTCGAAATTGATCTCACAGAACGAGGCCATAGTGGAGAATAAGGAGATATTGTTGCAGAAAAAGTATCCCAAGCAGTTGAATCGTTCGCGCAGCTttaacaatgccaacaacaataacagcaacatcaacagcacaagcatcaacaataacagcaatgcGACGCCtcacatcagcaacaacaacagcaacagcaacaatgctCAGCAGATGGGCGAGACCAAAGTGAATTTGGCACAGGCCATAGttcaaaagcagcagcaacaacagctgcaacaacaacagcagcagcagcaacaattgttgcagcaacagcaataccaAATGtacttgcaacagcagcagcaacaacagcagcagcagcagcaactggagCCTGTCAATGGTCTGCTTAAGCGTAGCTCTAATTATGTGAGCCTTAAAGGCGCTGCCACGCCCCTGGCAACGCCTAATGCTAAgctgcaacagttgccgcCGCCGCCATCGCCGTTGCCATTGCAAACGTTGCAATATCGTCAGGATCCAGCGACGCCAGTGCCCAAattggagcagcagcagcaacaaacgaCATCGAATCATGTGCAACCTCTTAATTTATCCGCGAAACCAAAGCCAGTGTTGCCGCAaaaagcgacagcagcaacagcaacaagtgtTGCTGCCACGTCAGTGCCAaagagcacaacaacaacaatgcaacagCCAAACAATTCAATCATTAAGAATCTATTGCTGAATGCACGCGGCTTGGCTGTGCCCATTGGCGAGGGCGATGATGCCGTCTATTCGTGTCCCATCTGTGCCAATGAGTTTCGCAGTGCGGATGAGTTGAAGTTGCATAACAGCACCTACTGCCAGGATGCCAGCAGCAGTGCGCCAATGAGTCCAGCCTCATCGCCGAGCAGCAAATACTTTCGCTCCAATTCCATATCGTTCAGTTTGCCCGAACTGAAGACGCACATGGCCAATTCAAAGAATCCATTGTCCTTGGCCAAGTTGGCCTGGTCGCAGCTAAAGACGAAACCGAGCAGCCTAGTGTTGAGTCGTCTCAGTGCGTCACAATCGCCGGCGCGCACATCCACGGTCACCtcaaccagcaacagcagcaacaacaacagcagcagcaacaacagtagcaacaacaacaattgcagcactatcagcagcagcaataacttGCCTGTTGTCACGCCTGCAATTTTGCCGCCCAGCATTGATGCCGCTAACGTTGCACTGCGTTTTGTGGATGCACCTTTACCCTCACCGGGTCCGCTCTTGGGCAAAACGCCGCTTGTGGATTATGCGGCACCGCGCAAGACGCAGGACACCCAAGTGGTGATAACAAAAATGCACGAGGATCGTCTAGAGAACATTATCATTGAGACGCCGGCCAAGCGTGTGAAACTGGCCAACGACAGcggaagcagcaacagcggaaGCGGAAGTGGAAGCGGAAGCCTCAGCTCGACAAGCTCCGCCTTTGCCTTGCCAGCGGCGGTGCAGTTGATCTTTGGCAGCAATCAGGAGCAACTGCAGTCGTCGGGCAGCAGTTATAGCGCCAAGGAGGAGCGACTGCGTCGCTTTACCTCCTCTGGCGGCAGCATGATACCCATCTCCGAGTGTCCTGAGCTCAACAAAAGTCCCAAAATGATACGCACTCCTTTGCTGTCCGGCGGCAGTTTTCAGGAGATGTCGCCACGTCCCAGCGACTCAAAGGAGCGTAAATTATCCACGCCTAATAATGGATTCCTGTTaagctcctcctcctcctccacaacgccacaacattttcaatttccgcCCATCAATTCCATAACTGCCTTCAATCCGTTGACATTGCCGCccatgagcaacaacaacaacaacaacagtgttgGTGAAGCCAGCAAGGCAATACCCTATGTGCCGGGCATACCGGGACCGGGTAGCTTGTCATTGTTGCCGCCAccacagcaactgcagctgccgcCGGCAGCAACACGTGGACGCAGTCCCAATCGCAAGCAGCCAAGTCCCAATCTGTTGCTGGAAGCGCCGCTCAAGGCATTGTCACCATTTGGTGGAGTACAAAATGTGCCCAGCGAATTCAGTCGACAGCCGCCGACTCCAGCACAACGTAATGCACTTCAAtggaacagcagcaacaaggcagcagcaggaacaggTGGATCTTCAGCAGGAACAGTtggagcaacagctgcaattgGACTGGACTTGAATAAGAAGCAACCGTTTAATTTCCTGCGCATGGCAGACAACGTCAAGAGCTGCTCCACCTCGGAGCTCACTGTGCCCGAGGTGCGACACTTTAATTTCGATAATGTGCATAAAACGCAGGAGGCGCTGGCGCCGCTGCACGTGGACACGCCGGAGGAGTCGATCAACAATACAAcggcaacatcagcaacagccacaacaataataacaactgcAACCAGTGCCAAATCGAAATTCCTGCGTCCCACCAGTCTGCCCCTTAAGCCGGGCACTTTTACGCCCAAGCGTCATCATGGAATCACGCCCACGGCAAATACGTTGCCACTGATCTCACCGGAAACACCGCGTCCCTCGAAATCATGCGTGCAGTTGTATTTGAATGGTCATGCCTACACTTATCTGGGTCTCAAGTGCAGCACCAAGATGTTCTACTGTACAGTGAACTGTCCGCAGCCATCGTATGTCGCTGGCATGCACAAGCTGTCCATGTACagtgtgtggcaagtgtgcGAGGAGAATCAACCGCATCCGTTGGGTTTCAAGCCCAAGCAAGTGATGGCTTTATATGATTCCAGGCAAAAGATGCTTGGTAGTGGTTCCTTTACGGCCATGGCCGGACAGGGCAAGATGTCCTACTCTGTGGTTAGTTCACAGCAAACTGTGAGCACCTGTTCCACCATCGCCAATGGACAGAACAAGTTCTATCAGCATCAGCTGAAGCAACCGCCAGCAATTGCAACATTGAGTGAGGCAAATGTGGCAGCCAAGGCAGCGAATGATGAGGCAGCAGCCAAGAAATTGGAGTCGGGGCAACTACTAGTCGGTGGCTATGAGTCGCATGAGGATTACACCTACATACGGGGACGTGGACGCGGCCGTTATGTGTGCTCCGAGTGTGGCATACGTTGCAAGAAGCCATCTATGCTCAAGAAGCACATACGCACGCACACGGATGTGCGTCCCTTCACCTGCAGTCACTGCAACTTTAGCTTCAAAACGAAGGGCAATCTCACCAAGCACATGCAATCAAAGACGCACTTCAAGAAGTGCATAGAGCTGGGCATCAATCCTGGCCCCATGCCGGCAGATGGTGAATTCCTCGATGTCGATGTGGAATTCGATCAGCAATCTTCAACTTCGGCCGGCGGACGCACTTCCTCCATGGCAGGCGAATCCGACTCCGATGACTACAGCGACAATGACTCCGAGAGCAGCGACACGGATGAGTCCAAGTCACGCCTAAAGGAGCACGAAGCAGCACGTGGCCTGCTCTCGTTGTCCATGACACCGCCCATACCGCAGAGTGTTTCTCCCTTTCCCTCCCAGCTGCAGGATACTCCACTGCCGGCTGCCAGTCCGGCGAATAGCATTGGCTCCTCCGCTGGCAGCAGCAGTGCAGCGGGCAGCTCGCAACCCAAGCGTCTGGTTTGTTCATTTACATCACCAAAGCCGCCGTTTGATTACCAGAAGCAAGAACAGTATTACTCCAATCCGGAGGAATCCAAGCCGAAGCGTGGCGTGCCCAACGATGAGAGCAGTGCTCCCATGGATCTGACCAAGCCACGGTCCTCAGCTGGCCAATTGCCAGCCTCATCAGCTGGAAGCTCGCCGATTGAACAGCTGCTGCCCAAATCCCAGGCCCAACAGATGCGCGATGTCATCTTTGGCACCGGGAATAATGAATCTGGCTTCATGAAGACACTCATCTCGGTGTCCGACAAGGTGCGCATCTCAGCGGAAATGGAGGAGCAGGCAAAGCGCGAAACTGAAGGAGATGATGTCCTCCTGCAGACCTACATCAAGGAGCAGGCATTGCAATATGCCAAAATGAAGCAGAGTCAGTTCAGTCGCAGTTACCTGGTCAcaagcaccagcagcagctctTCAGCCACTCCAATTGTGAGCAGCAGTCTCCATGTGTTGAACAAACAGCCAATGATTATCACAGAGCTGCCGAGCATTGAGGTGCATGAGGTGAAGACACCGGAGCCGGTTGCCATTGTCGAAGCCACGCCAACAGCAGTCGAGGAGATGGACGAAGTCGAAGCAGGAGCAGGTGCGGGTGCAGGTGCAACTGTGGAGCAGGAGCAGACAACGCCCGTTGCTGTCAGCGTAGCTGTCTCCGTTCCTGTTGCCGTCTCCATATCGAGCACAAAGCAGCTGCCTCACAATGCCAATTTACCGGCTGCAGTGCAGCAACCAGATGCCACCGATTTCAGTGGTGtgctcagcaacagcaacagcaacaacaatgctgcaacaacaacaacaactcctgCCGCACGCACTGTTATCGTTGGCGAGGAAGTCTTCAAGACAACTCCAACGAGTGCCGCCTCCGAGGTGACTGCTCCAGTTTCCGTTGCCTCCACAAGTTATCCTGGTCGCGTTgtgccaccaccgccaccgccaatTGCCGGCGATGCGCGTCCCACGTGCAGCATCTGCAACAAGACGTTCCAGCGGCAACATCAGCTAACGCTGCACATGAACATCCACTACATGGAGCGCAAGTTCAAGTGCGAACCTTGCAGCATCTCGTTTCGCACGCAGGGACATCTCCAGAAGCACGAACGCTCCGAGGCGCACAAGAACAAGGTGATGATGACGTCGACATTTGGTGTGCCAACCACATCGAATCCACGTCCATTTGAGTGCACCGACTGCAAGATTGCCTTTCGCATCCACGGCCATCTGGCGAAGCATTTGCGCTCTAAGACGCATGTGCAGAAGCTCGAGTGTCTGCAGAAGCTACCATTTGGCACCTATGCAGAGATTGAGCGCGCCGGGATCAGTCTGACTGAGATCGATACCAGTGACTGTGAGAATTCGCTGATATCACTCAAGTTGCTGGCCCAGAAGCTGCTCGAGAAGGATCCCAATAAGCTAAGTGGTTATACCACGCCATCGGGCATGATGCAACTGGGATCGGATACACCGGCAGCTGGGCAGGACAGCGCCTCCGAGGATGGCTTCAGTGCGGCGAATAGTGCAGCTGCCTCGGCAATTGCATCGCTGGATAACGACAGTGCGGGCAACACGCCACAACGTGCCAGCTCCATGTCCGAGGATGAAACACTGGCCAACGGACTCAGTCAGAGTCACAGCCTGAAGCGTCGTCTGCCCGGCAGCAGCTTCAGCAGCAACGGCGACGAGAGCGACAATCCGCTGGAGGGCAGCGAGAAGCGGGCGAGAAGCAACACCAATGAGCAACTTACTCACCCATTGGCGGCATCCACAGCAACAGCGAGCAACTGA
Protein Sequence
MARRKGSGRGKSTVNSRKNALETSREKLKDEPVSNTSQASKFDDTMENATTNTAKHYKTAATNSKQYKNNNKVSSTRRATAAAAAASAAAAATTTAAKTKKETYRSSNEIAATATPKSNKVNNKTTAATITTTAAAAAAAAAATTATTTVTTAISTSTQELSAQVVESNSSNINNNNNNNNNNNNNHHSDNSISENNYEFKARDKANISDSKMTLQHVASNASGPVATTTTTNHVVPVNATATVSDEATAAATIVDWANTTTNLRYLHKKFKRLASTTEAEAVDVVRTTSLSSNSSISPPPPAAATTTIAAAAATTVVPVSMSLAVPLLNGHVTTTNEFSANFINEESNNNNNSSSSKNVAGAPRTRTPLSNNNSNSNYASNATLSPATFAQHQQSTQPTTSTTAAAAAAATTTVTATATLQIQPQQAAATATTSATTTTPAEKPGRYICPYCNMPCAKPSVLQKHIRAHTNERPYPCDTCGIAFKTKSNLYKHCRSRSHAARMRGIDVPAHEADGLSDQDGDGELSNSSSELLSVEILSRAESPYDEPMPSPTPSPSTLSAAKSAYLQQPPLPQHMQQLPLGSPAAGTLPPPTADTLHSATAQHRQSIDYKPYKPKFHNAALYAPGSSSKEQQVQLQVLQQQQQALQQQQQQQQQQQQQHQQQKLASQQPTLAHPTLSPSTQLKLNNHINSHQMQLQLQHQHQQHQQQQQLHAQQSLLLAAAANPAALTGLPPPPTMPTSVYYLGQPQYFNPATAALHHQALAFQQMQFQQHFQLQQQHQQQQQQQQQQHQQQQHSPLLKAPTHPPQPQPQPQPQLQPLPPQPLPQPQQLVRSNSQQASITATTAAVLPAPATPTPPANLSSFASASGGMQVNVEKVQEHISKLISQNEAIVENKEILLQKKYPKQLNRSRSFNNANNNNSNINSTSINNNSNATPHISNNNSNSNNAQQMGETKVNLAQAIVQKQQQQQLQQQQQQQQQLLQQQQYQMYLQQQQQQQQQQQQLEPVNGLLKRSSNYVSLKGAATPLATPNAKLQQLPPPPSPLPLQTLQYRQDPATPVPKLEQQQQQTTSNHVQPLNLSAKPKPVLPQKATAATATSVAATSVPKSTTTTMQQPNNSIIKNLLLNARGLAVPIGEGDDAVYSCPICANEFRSADELKLHNSTYCQDASSSAPMSPASSPSSKYFRSNSISFSLPELKTHMANSKNPLSLAKLAWSQLKTKPSSLVLSRLSASQSPARTSTVTSTSNSSNNNSSSNNSSNNNNCSTISSSNNLPVVTPAILPPSIDAANVALRFVDAPLPSPGPLLGKTPLVDYAAPRKTQDTQVVITKMHEDRLENIIIETPAKRVKLANDSGSSNSGSGSGSGSLSSTSSAFALPAAVQLIFGSNQEQLQSSGSSYSAKEERLRRFTSSGGSMIPISECPELNKSPKMIRTPLLSGGSFQEMSPRPSDSKERKLSTPNNGFLLSSSSSSTTPQHFQFPPINSITAFNPLTLPPMSNNNNNNSVGEASKAIPYVPGIPGPGSLSLLPPPQQLQLPPAATRGRSPNRKQPSPNLLLEAPLKALSPFGGVQNVPSEFSRQPPTPAQRNALQWNSSNKAAAGTGGSSAGTVGATAAIGLDLNKKQPFNFLRMADNVKSCSTSELTVPEVRHFNFDNVHKTQEALAPLHVDTPEESINNTTATSATATTIITTATSAKSKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLKCSTKMFYCTVNCPQPSYVAGMHKLSMYSVWQVCEENQPHPLGFKPKQVMALYDSRQKMLGSGSFTAMAGQGKMSYSVVSSQQTVSTCSTIANGQNKFYQHQLKQPPAIATLSEANVAAKAANDEAAAKKLESGQLLVGGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCSHCNFSFKTKGNLTKHMQSKTHFKKCIELGINPGPMPADGEFLDVDVEFDQQSSTSAGGRTSSMAGESDSDDYSDNDSESSDTDESKSRLKEHEAARGLLSLSMTPPIPQSVSPFPSQLQDTPLPAASPANSIGSSAGSSSAAGSSQPKRLVCSFTSPKPPFDYQKQEQYYSNPEESKPKRGVPNDESSAPMDLTKPRSSAGQLPASSAGSSPIEQLLPKSQAQQMRDVIFGTGNNESGFMKTLISVSDKVRISAEMEEQAKRETEGDDVLLQTYIKEQALQYAKMKQSQFSRSYLVTSTSSSSSATPIVSSSLHVLNKQPMIITELPSIEVHEVKTPEPVAIVEATPTAVEEMDEVEAGAGAGAGATVEQEQTTPVAVSVAVSVPVAVSISSTKQLPHNANLPAAVQQPDATDFSGVLSNSNSNNNAATTTTTPAARTVIVGEEVFKTTPTSAASEVTAPVSVASTSYPGRVVPPPPPPIAGDARPTCSICNKTFQRQHQLTLHMNIHYMERKFKCEPCSISFRTQGHLQKHERSEAHKNKVMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHLRSKTHVQKLECLQKLPFGTYAEIERAGISLTEIDTSDCENSLISLKLLAQKLLEKDPNKLSGYTTPSGMMQLGSDTPAAGQDSASEDGFSAANSAAASAIASLDNDSAGNTPQRASSMSEDETLANGLSQSHSLKRRLPGSSFSSNGDESDNPLEGSEKRARSNTNEQLTHPLAASTATASN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2