Drel004047.1
Basic Information
- Insect
- Drosophila rellima
- Gene Symbol
- Hivep2
- Assembly
- GCA_035043635.1
- Location
- JAWNMV010000145.1:10200931-10210126[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00021 0.015 15.8 0.3 1 23 239 261 239 261 0.98 2 8 0.00031 0.022 15.2 2.9 1 21 267 287 267 291 0.89 3 8 0.028 2 9.1 0.1 1 19 924 942 924 945 0.93 4 8 2.8e-06 0.0002 21.7 2.0 1 23 1691 1713 1691 1713 0.99 5 8 1.2e-05 0.00083 19.7 5.3 1 23 1719 1743 1719 1743 0.92 6 8 2.2e-05 0.0015 18.9 3.5 2 23 2213 2234 2213 2234 0.97 7 8 0.00081 0.056 14.0 1.2 1 23 2240 2264 2240 2264 0.91 8 8 0.0026 0.18 12.4 2.7 1 23 2285 2309 2285 2309 0.92
Sequence Information
- Coding Sequence
- ATGACGCTACAGCATGTGGCAAGCAACGCATCGGGCCACAATGTTgccacaacaactacaacgaatCATGTGGTGACGGCAACAGTCAGCGATGAAGTAACCACAGCGGCAACAATTGTCGATTGGGCAGCaaacacgacaacaacaaatttgcgtTATTTGCACAAGAAATTCAAACGTTTGGCGAGCACCACCGAAGCCGATGCTGTTGATGTGGTGCGCACCACATCGTTGTCTTCAAATAGCTCCATatcgccaccaccaccaacagcagcagcaacagttgcagcaacagttgcagcatcAGTTGCTGCgacagcaccagcaacaacagtgttGCCACTGCAAATGCCATTGGCGTTGGCATTAGTCAATGGTCATGTGACAACGGCGACAAATGAATTCAGTgccaattttcaaaatgaggagagcaacagcaacaacaacaacagcagcagcagcaacagtaaaaatgttgttgttgcgcctaGAACACGCACACCGctcagcaataacaacagcaacagtaactaTGCCAGCAATGCAACATTATCGCCAGCAACATTTGCACAGCATCAGCAATCGacgcagccaacaacaacagcaggagcaacaacaactgtaactgcaacagcaacaatgcaaatacagcagcaacaagtaGCTggagcaacaataacagcaacatcaacacctGCCGAGAAACCGGGACGTTATATATGCCCCTATTGCAATATGCCATGTGCCAAGCCATCGGTGTTGCAGAAACACATTCGTGCCCATACCAACGAACGTCCGTATCCCTGCGACACCTGCGGCATTGCCTTCAAAACGAAGAGCAATCTCTATAAACACTGCCGTTCCCGCTCCCATGTGTCGCGTATGCGAGGCATCGATGTCCCCGCCCATGAGGCCGATGGTCTCTCTGATCAGGACGGCGATGGCGAgctcagcaacagcagctccgAGCTCCTAAGTGTGGAAATTCTAAGTCGTGCGGAGTCGCCTTATGACGAGCCCATGGCCTCGCCAACGCCATCACCCTCCACATTGTCGGCGGCGAAGAGCGCGTACTTGCAACAGCCGCCGTTGCCGCAGCATATGCAACAGTTGCCGCTGGGTTCGCCGGCAGCAGGCACATTGCCGCCGCCAACAGCAGATACGTTGCACTCGGCAACGGCGCAGCATCGGCAATCGATTGATTACAAGCCATATAAGCCCAAGTTTCATAATGCAGCGCTTTATGCgcctggcagcagcagcaaggaGCAACAAGTTCAGCTGCagatgctgcagcagcaacagcaggcattacagcaccaacagcagcagcaacaacaacaacaacagcagcagcagcaacaacagcaacaaaagttgtCGTCACAGCAACCAACATTGGCACATCCAACACTCTCGCCGAGCACACAGTTGAAGCTCAACAATCACATCAACTCACATCagatgcaactgcagctgcaacatcagcagcagcagcagcaccaacagcagctacaCGCACAGCAATCATTGCTGCTGGCGGCAGCTGCTAATCCTGCGGCATTAACAGGATTGCCCCCACCACCGACGATGCCCACAAGTGTCTACTATTTGGGGCAGCCGCAGTATTTTAATCCAGCTGCCGCAGCGATGCATCAACAAGCGTTCGCCTTtcagcaaatgcaaatccaGCAACACttccagctgcagcagcagcaacaccaacaacagcagcaacaccagcagcaacagcaacaccagcagcaacagcaacattcgCCGCTGTTGAAGGCGCCTACGCATCCAGCGCAACCACAGCCACAACCACTGCAACCACAGCCATTGGCACAACCACAGCAGCTGGTGCGTTCAAACAGTCAACAGTCGTCGATAACAGCAACGACAGCCGCCGTGTTGCCagcccctgccacgcccacaacgccCAATTTGAGCAGCCAATTTGCCAGTGCCAGCGGTGGCATGCAAGTGAATGTGGAGAAGGTGCAGGAGCACATCTCGAAATTGATCTCACAGAACGAGGCCATAGTGGAGAACAAGGAGATATTGTTGCAGAAAAAGTATCCCAAGCAGTTGAATCGTTCGCGCAGCTttaacaatgccaacaatagcagcagcagcaacattaacaacaacaacggcagcaacatcaacaacaatatcaacaacaacagcaacaactctcAACAGCTGGGCGAGACCAAAGTGAATCTGGCCCAGGCCATAGttcaaaagcagcagcagcaacagctgcaacaacagcagcagcagcaacaacagttgctgcagcaacagcaataccAAATGtacttgcagcagcagcagcaactggagcCCGTTGTTAATGGTTTGCTCAAACGCAGCAACTCCAATTATGTGGGCATTAAAGGCGCTGCCACGCCCTTGCCAACGCCCCCTGCCaagctgcaacagttgccgccgccgccatcGCCGTTGCCGCTGCAAACGTTGCAATATCGCCAGGATCCGGCAACGCCAGTGCCCAAGTTGGtggaacaacagcagcagcaacaaacgacaacaaatcATGTGCAGCCACTGAACTTATCCGCGAAACCAAAGCAGCCACAAAGAgtgacggcaacaacagcagcagcaactgttgctgccacgccAGCAACAAAGAGCACAACAACATCCATGCAACAgccaaacaattcaattattaagAATCTATTGCTGAATGCCCGGGGATTGGCCGTGCCCATTGGCGAGGGCGACGATGCCGTCTATTCGTGTCCCATTTGTGCCAATGAATTTCGCAGTGCGGATGAACTGAAGCTGCACAACAGCACCTACTGCCAGGACGCGAGCAGCAGTGCCCCAATGAGTCCCGCCTCCTCGCCGAGCAGCAAATACTTTCGCTCCAATTCCATGTCGTTCAGTTTGCCCGAACTCAAGTCGCACATGGCCAACTCGAAGAACCCATTGTCGCTGGCCAAGTTGGCCTGGTCGCAGCTGAAAACGAAACCGAGTAGTCTAGTGTTGAGTCGTTTGAGTGCGGCACAGTCGCCAGCACGCACCTCCACAGTCACCTCAAccagcaacagtagcagcatcaacagcagcaacagcaacagcctaaacaacagcaacaacaacagcaacaacaacagcagcaacaacagcagcagcaacagcatcagcaacaacttgCCTCTTGTCACGCCTGCAACAGTGCCGCCCAGCATTGATGCTAGCAATGCGGCACTGCGCTTTGTGGATGCTCCCCTGCCCTCGCCTGGTCCACTTCTGGGCAAAACGCCGCTGGTGGATTATGCGGCGCCGCGCAAGACGCAGGACAATCAAGTGGTCATAACCAAAATGCACGAGGATCGACTGGAGAATATAATCATAGAAGCACCAGCCAAGCGTGTTAAATTGAGCAACGACAGCGGGAGTTGCAGTGGCAGCTCGACTAGCTCAGCTTTTGCTTTGCCCGCATCGGTGCAGTTGCTCTTCAATCCGGAGCAGCTGCCGCCGACGACGCCCAGCAATTACAGCGCCAAACAGGAGCGACTGCATCGCTTTACCTCCTCCGGCGGCAGCATGATACCCATTTCCGAGTGCCCCGAACTCAACAAGAGTCCCAAAATGATACGCACTCCGTTGCTGTCCGGCGGCAGCTTTCAGGAGATGTCGCCACGTCCGAACGATGCCAAGGAGCGTAAATTATCGACGACAAATAATGGTTTCCTGTCCACCAACGCGTCCACGACGCCACAACACTTTCAATTTCCGCCCATCAATTCGATAACTGCCTTTAATCCATTGACATTGCCTCCAATGGGCAACAATAACGTTGGCGAGGTAAGCAAGTCAATACCCTATGTGCCGGGCATACCGGGACCGGGTAGCTTGTCACtgttgccaccgccaccgcagcaactgcagctgccggCAACCCGTGGTCGCAGTCCCAATCGCAAGCAGCCGAGTCCCAATCTCTTATTGGAAGCGGCGCCGCTGAAGGCGTTGTCACCATTTGGTGGCGTACAGAATCTGCCCAGCGAATTTAGTCGACAGCCGCCGACGCCGGCGCAAAGGAATGCGCTGCaatggagcagcagcaaacagGCAGGAGGATtggcaacaggagcagcaacaacagctaccaCAACTGGCCTGGAATTGAACAAGAAGCAGCCCTTCAATTTTCTGCGCATGGCCGACAATGTCAAGAGCTGCTCCAGCTCAGAGCCGTCGCAGCCCGAGGTGCGGCACTTTAATTTCGATAATGTGCACAAAACGCAGGAGGCGCTGGCGCCGCTGCACGTGGAGACGCCGGAGGAGGCCAGCTCCTCCAGCAGCACAACAGCCAGTGGAACaagcataacaacaacaacaactccaaccAGTGCCAAATCGAAATTCCTGCGTCCCAGCAGTTTGCCCCTTAAGCCGGGCACCTTTACGCCGAAACGTCATCATGGAATCACGCCGACGGCAAACACATTGCCATTGATCTCACCAGAGACGCCGCGTCCATCCAAGTCATGTGTACAATTGTATTTGAATGGTCATGCCTACACCTATCTGGGTCTCAAGTGCAGCACCAAGATGTTCTACTGTACGGTGAACTGTCCGCAGCCATCGTATGTCGCTGGCATGCACAAGCTGTCCATGTACAGTGTGTGGCAGGTGTGCGAGGAGAATCAACCGCATCCGTTGGGCTTGAAGCCCAAACAGGTGATGGCCTTGTATGATTCCCGGCAAAAGATGCTGGGCAGCGGCTCCTTTATGGCCATGGCCGGTCAAGGCAAGATGTCCTACGCGGTGGTCAGTTCACAGCAAATTGTGAGCACCTGTTCCACCATAGTCAATGGACAGAACAAGTTCTATCAGCATCAGTTGAAGCAACCGCCGCCGccggcagcaacaattgccacCTTGAGTGAGGCGAATGTGGCAGCCAAGGCGGCCAATGATGAGGCGGCGGCAGCCAAGAAATTGGAGTCGGGACAGCTGCTGGTCGGTGGCTATGAGTCGCACGAGGATTACACCTATATACGGGGACGTGGACGTGGTCGTTATGTGTGCTCCGAGTGCGGCATTCGCTGCAAGAAGCCATCGATGCTCAAGAAGCACATTCGGACGCACACGGATGTGCGTCCCTTTACCTGCAGTCACTGCAACTTCAGCTTCAAAACCAAGGGCAATCTCACCAAGCACATGCAATCGAAGACGCACTTCAAGAAGTGCATCGAGCTGGGCATCAATCCCGGTCCCATGCCGGCAGATGGCGAATTCCTCGATGTCGATGTGGAATTCGATCAGCAATCGTCGACTTCCGCCGGCGGACGCACTTCCTCCATGGCGGGCGAGTCCGATTCCGATGACTACAGCGACAATGAGTCCGAGAGCAGCGacACGGATGAGTCCAAGTCGCGCCTGAAGGAGCACGAGGCGGCACGTGGCCTGTTGTCGTTATCCATGACGCCGCCGATACCGCAGAGTGTCTCTCCGTTTCCCGCCCAGCTGCAGGAGACTCCGCTGCCGGCGGCTAGTCCGGCGAACAGCATTGGTTCCTCCGCGGGCAGCAGCAGTGCAGCGGGCAGTTCCCAGCCGAAGCGTCTGGTCTGTTCATTTACATCGCCGAAGCCGCCATTTGATTACCAGAAGCAGGAGCAGTATTACTCCAATCCGGAGGAATCGAAGCCCAAGCGTGGCGTGCCCAGCGATGAGAGCAGTGCTCCCATGGATCTGACCAAGCCACGCTCCACATCCGCTCAGTTACCCATTGATACTTTGCCGATGGAACAGCTGCTGCCCAAATCCCAGGCACAGCAGATGCGCGATGTCATCTTTGGCACTGGGAACAATGAATCTGGCTTTATGAAGACACTCATTTCGGTGTCCGACAAGGTGCGCATCTCAGCCGAAATGGAGGAGCAGGCGAAACGGGAAACCGAAGGCGATGATGTCCTGCTGCAGACTTACATCAAGGAGCAGGCACTGCAATATGCCAAAATGAAGCAGAGTCAGTTTAGTCGCAGCTATATGGTCACCAGCACCTGTACCAGCAGCAGCTCGGCAGGCACATCAATTGTCAGCAGCAGTCTCCATGTGCTGAACAAACCGCCAATGATAATTACAGAGCTGCCCAGCATTGAGGTGCATGAGGTGAAGACACCGGAGCCGGTTGTGGACGAGACGCCAGCTGCAGTTGAGGTAATGGAGGAAGAAGCAGTAACGGGATCAGGAGCAGGATCAGTTATAGCAGTGGAGCAGGAGGTAAAGACAACACCAGTTGCTGTCAGCGTTGCCGTTCCCATTCCAGTTACCATCACGGAGCAGCTGCCTCACAATGCCAATTTACCTGCTGCAGTGCAGCAACCAGATGCCACCGATTTCAGTGGCGTCTTgagcagcagtaacaacaacaacaactctgctgcagtaacaacaacaacgacaacaacaacttctgcCACTCCTCGCACTGTTATCGTTGGCGAGGAAGGCAACTTCAAGACAACTGCCACGACAAGTGTCGCCTCCTCCGAGGTGCCCACTCCCGTGTCCGTTGCCTCCACGTTTCCCGCCGGTCGCGTTgtgccgccaccgccgccgccaatTGCCAGCGATGCGCGTCCGACGTGCAGCATCTGCAACAAGACCTTCCAGCGGCAACATCAACTGACGCTCCACATGAACATCCACTACATGGAGCGCAAGTTCAAGTGCGAGCCGTGCAGCATCTCGTTTCGAACGCAGGGACATCTCCAGAAGCACGAACGCTCCGAGGCGCACAAGAATAAGGTGATGATGACATCAACATTTGGTGTGCCAACGACATCGAATCCACGTCCCTTCGAGTGCACCGACTGCAAGATTGCCTTTCGCATCCATGGCCATTTGGCGAAGCATTTGCGCTCCAAGACGCATGTCCAGAAGCTGGAGTGTCTGCAGAAGCTGCCATTTGGCACCTATGCGGAGATTGAACGCGCCGGGATTAGTCTGACTGAGATCGATACCAGTGACTGTGAGAATTCGCTGATATCCCTCAAGTTACTCGCCCAGAAGCTGCTCGAGAAGGATCCCAATAAGCTGAGTGGTTATACCACGCCGTCGGGCATGTTGCAGCTGGGCTCTGATGCCCCGGCAGCTGGGCAGGACAGCGCCTCCGAGGATGGCTTCAGCGCAGCGAACAGTGCAGCGGCCTCGGCTATTGCCTCGCTGGATAACGACAGTGCGGGCAACACGCCACAACGTGCCAGCTCCATGTCCGAGGATGAAACTCTGGCCAATGGCCTCAGTcatagtcacagtcacagtcacagcctGAAGCGTCGTCTGCCGGGCAGCAGCTTCAGCAGCAACGGCGACGAGAGCGACAATCCCCTGGAGGGCAGCGAGAAGCGGGCGAGAAGCAACACCAATGAGCAACTTGCTCTGCCAGTCGCGGccgtggcggcggcggcatcgACGGCAACAGCGAGCAACTGA
- Protein Sequence
- MTLQHVASNASGHNVATTTTTNHVVTATVSDEVTTAATIVDWAANTTTTNLRYLHKKFKRLASTTEADAVDVVRTTSLSSNSSISPPPPTAAATVAATVAASVAATAPATTVLPLQMPLALALVNGHVTTATNEFSANFQNEESNSNNNNSSSSNSKNVVVAPRTRTPLSNNNSNSNYASNATLSPATFAQHQQSTQPTTTAGATTTVTATATMQIQQQQVAGATITATSTPAEKPGRYICPYCNMPCAKPSVLQKHIRAHTNERPYPCDTCGIAFKTKSNLYKHCRSRSHVSRMRGIDVPAHEADGLSDQDGDGELSNSSSELLSVEILSRAESPYDEPMASPTPSPSTLSAAKSAYLQQPPLPQHMQQLPLGSPAAGTLPPPTADTLHSATAQHRQSIDYKPYKPKFHNAALYAPGSSSKEQQVQLQMLQQQQQALQHQQQQQQQQQQQQQQQQQQKLSSQQPTLAHPTLSPSTQLKLNNHINSHQMQLQLQHQQQQQHQQQLHAQQSLLLAAAANPAALTGLPPPPTMPTSVYYLGQPQYFNPAAAAMHQQAFAFQQMQIQQHFQLQQQQHQQQQQHQQQQQHQQQQQHSPLLKAPTHPAQPQPQPLQPQPLAQPQQLVRSNSQQSSITATTAAVLPAPATPTTPNLSSQFASASGGMQVNVEKVQEHISKLISQNEAIVENKEILLQKKYPKQLNRSRSFNNANNSSSSNINNNNGSNINNNINNNSNNSQQLGETKVNLAQAIVQKQQQQQLQQQQQQQQQLLQQQQYQMYLQQQQQLEPVVNGLLKRSNSNYVGIKGAATPLPTPPAKLQQLPPPPSPLPLQTLQYRQDPATPVPKLVEQQQQQQTTTNHVQPLNLSAKPKQPQRVTATTAAATVAATPATKSTTTSMQQPNNSIIKNLLLNARGLAVPIGEGDDAVYSCPICANEFRSADELKLHNSTYCQDASSSAPMSPASSPSSKYFRSNSMSFSLPELKSHMANSKNPLSLAKLAWSQLKTKPSSLVLSRLSAAQSPARTSTVTSTSNSSSINSSNSNSLNNSNNNSNNNSSNNSSSNSISNNLPLVTPATVPPSIDASNAALRFVDAPLPSPGPLLGKTPLVDYAAPRKTQDNQVVITKMHEDRLENIIIEAPAKRVKLSNDSGSCSGSSTSSAFALPASVQLLFNPEQLPPTTPSNYSAKQERLHRFTSSGGSMIPISECPELNKSPKMIRTPLLSGGSFQEMSPRPNDAKERKLSTTNNGFLSTNASTTPQHFQFPPINSITAFNPLTLPPMGNNNVGEVSKSIPYVPGIPGPGSLSLLPPPPQQLQLPATRGRSPNRKQPSPNLLLEAAPLKALSPFGGVQNLPSEFSRQPPTPAQRNALQWSSSKQAGGLATGAATTATTTGLELNKKQPFNFLRMADNVKSCSSSEPSQPEVRHFNFDNVHKTQEALAPLHVETPEEASSSSSTTASGTSITTTTTPTSAKSKFLRPSSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLKCSTKMFYCTVNCPQPSYVAGMHKLSMYSVWQVCEENQPHPLGLKPKQVMALYDSRQKMLGSGSFMAMAGQGKMSYAVVSSQQIVSTCSTIVNGQNKFYQHQLKQPPPPAATIATLSEANVAAKAANDEAAAAKKLESGQLLVGGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCSHCNFSFKTKGNLTKHMQSKTHFKKCIELGINPGPMPADGEFLDVDVEFDQQSSTSAGGRTSSMAGESDSDDYSDNESESSDTDESKSRLKEHEAARGLLSLSMTPPIPQSVSPFPAQLQETPLPAASPANSIGSSAGSSSAAGSSQPKRLVCSFTSPKPPFDYQKQEQYYSNPEESKPKRGVPSDESSAPMDLTKPRSTSAQLPIDTLPMEQLLPKSQAQQMRDVIFGTGNNESGFMKTLISVSDKVRISAEMEEQAKRETEGDDVLLQTYIKEQALQYAKMKQSQFSRSYMVTSTCTSSSSAGTSIVSSSLHVLNKPPMIITELPSIEVHEVKTPEPVVDETPAAVEVMEEEAVTGSGAGSVIAVEQEVKTTPVAVSVAVPIPVTITEQLPHNANLPAAVQQPDATDFSGVLSSSNNNNNSAAVTTTTTTTTSATPRTVIVGEEGNFKTTATTSVASSEVPTPVSVASTFPAGRVVPPPPPPIASDARPTCSICNKTFQRQHQLTLHMNIHYMERKFKCEPCSISFRTQGHLQKHERSEAHKNKVMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHLRSKTHVQKLECLQKLPFGTYAEIERAGISLTEIDTSDCENSLISLKLLAQKLLEKDPNKLSGYTTPSGMLQLGSDAPAAGQDSASEDGFSAANSAAASAIASLDNDSAGNTPQRASSMSEDETLANGLSHSHSHSHSLKRRLPGSSFSSNGDESDNPLEGSEKRARSNTNEQLALPVAAVAAAASTATASN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00523176;
- 90% Identity
- -
- 80% Identity
- -