Dhel021655.1
Basic Information
- Insect
- Drosophila helvetica
- Gene Symbol
- bab2
- Assembly
- GCA_963969585.1
- Location
- OZ018404.1:23181907-23184033[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.4e-12 1.4e-08 34.7 0.1 1 44 402 445 402 446 0.91
Sequence Information
- Coding Sequence
- ATGGGCGGGCCCACGGCGCCCGTGGCCAGCAGCGAGGGCCAGACGTACTGCCTGCGCTGGAACAACCACCAGACCAATCTGGTGCAGATCCTGCACGCGTTGCACGAGGTCGGCAGCTACGTCGACTGCACCCTAGTCGTGGACGATGAGCAATTCAAGGCACACCGTGTAGTGCTGGCGGCAAACTCGCCGTACTTCCAGCACATCCTGCAGGACGTACCCCAGGACCAGTGCAGCATAATCCTGCCGGGCGTAAGGGGCTTCGAGATCGCGGCCCTGCTTCAGTACATGTACACGGGTGAGACCACGGTGACGAAGAGCCAGGAGCCGGAGATCCTGCGCACTGCCAAGGAGCTGCAGGTGAAGGGTCTCTACGACAATCTGATGAAGTACAATCACAAGGCGGCCAGCTCAGCGGACGAGCGCGTCCAGAGCCAGTTCAATGCCAGCATCACGCCAACCTCCAGCTCGGGATTGGGCGCTGGCTCTGGCAAGCCCCTCAACGGGTCCCCTGCCGACGGATCCTTCGGCCAGCAGCACCACAACTCCTCCTCCGTGATCTCAACGTCCACGCACATCTCGCCCAGCGCCGCCATCTCGAGCAGCTGCTCCCCACCGCCGCCGCAATTCGGAACCTACCAGCCGCCGTACACAAACTTCccgccacatccacatcctcaCATCCCAGCCGGTGAGACTCCCCTGACGCCAACCCATGCCGCCTCACACGCCGTAGCCGGTGAGGCAGGCCAGTGGCCCCTCTCGCcctccgctgccgctgccgccatGCTAAACTCCGTGTATGAGTCCGCAGCCGACATGAATCCGCTCAAGCGCAAGAAACTCTCGGCCATCTCAAGCATGCTACTCAACAGCACCCGGGACACGCCCATTCTGCGCAACGTGCTGGCGCAGGCCAACCCAGCTGACTCCTCGCAGCCCAATCCTCTGCTGCTGAAGAgttcctccacctcctccctAAACGAAAAGACTCCCACCCATCAGCACCAGCCCCCCCACCAGCACCACAGCGGAGGCGGAGTGGGAGTCGGTGTGAGCAGCGGAACCGGTAGCCACAGCTTCAACGGCTCAGACTACGGCGGCGACAAGGAGCCCTTATCACCGCACACGGACCGTTCCTTCGATGAGGAGACTAGCGGGCCGGGCGGCAAGAAGCCAGAGTGGAAGCGTTATAAGCAGTACACGCGGGCGGACATGATGTGTGCCATTCAGGCCGTTCGCGAAGGCATGAGCGCGCTTCAGGCAAGCCGCAAGTACGGACTACCCAGCCGCACCCTCTACGACAAGGTCCGCAAGCTGAATATCACTACGGGCCGTGGaacgcatcgcactcccaagcGCAGCCCACCCGGAGTGGAGTCCTCCGCCGCCTTTCCCTACTCCGCggcagccgctgccgcagcTGCGCACAACTATGGACATgtccatggccatggccagaCGGATCTGGAGCGTGAGCCGAAGGAGCATGGCCAGCATAGTGGACATGGAGGCGGCCACCACGGCATGCCACCCACCATTCCCCACTCGGCAGCCGCCCTTCTCGATCACGCCTTTCTGCAGCAGGCCCTAGAGAACCGGGGCGGGGATATGGCCGGACGTGAAGCCCTCCACGCCATGGCTCTGGCAGCAGCCGCCCACGCAGCAGCCAACCGAATGTCTAGCAGCCCCCAAGAGTCTGGATCCAATGGACACGCAGCCAGATCTCCAAGTCCAAGGGCTCGCCACTACTCCGAGCACGAGGCCATGGAGTTAGAGATGGAGAAGCACGAGCAGCGCCTGATCAAGAGGGAGCGTGACCAGGACGAACGCGAAGATGCTGACGATGAAGATGATCATGACCAGGAGCAGGATCACGATCACGACCATGTGGAAGATCTCTCGCTGGCACGCAAAGAACGCCCCGAGTCGCCCTACTCTCCTCAGCCCCCACGGGCCTCCTCGCCGGTCGAAAGCGCCAGTGTGATCATGCACTCCAACAGGGCCTCCACCAATGGAAAGGACCACGAGGATTATCCCCACTCACCACCACCAGTGGccctgggtctgggcctgaaGCGGGAGCTCGGAGTCGGCAGCGAGGAGTCGCAGGCCAGAACCGATTGA
- Protein Sequence
- MGGPTAPVASSEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQHILQDVPQDQCSIILPGVRGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKYNHKAASSADERVQSQFNASITPTSSSGLGAGSGKPLNGSPADGSFGQQHHNSSSVISTSTHISPSAAISSSCSPPPPQFGTYQPPYTNFPPHPHPHIPAGETPLTPTHAASHAVAGEAGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANPADSSQPNPLLLKSSSTSSLNEKTPTHQHQPPHQHHSGGGVGVGVSSGTGSHSFNGSDYGGDKEPLSPHTDRSFDEETSGPGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGVESSAAFPYSAAAAAAAAHNYGHVHGHGQTDLEREPKEHGQHSGHGGGHHGMPPTIPHSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSSSPQESGSNGHAARSPSPRARHYSEHEAMELEMEKHEQRLIKRERDQDEREDADDEDDHDQEQDHDHDHVEDLSLARKERPESPYSPQPPRASSPVESASVIMHSNRASTNGKDHEDYPHSPPPVALGLGLKRELGVGSEESQARTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00611434;
- 90% Identity
- iTF_00517793; iTF_00484519; iTF_00480941; iTF_00484371; iTF_00471540; iTF_00480789; iTF_00471703; iTF_00473707; iTF_00473865; iTF_00487224; iTF_00487381; iTF_00603435; iTF_00603272; iTF_00611278; iTF_00611434; iTF_00574736; iTF_00580641; iTF_00574903; iTF_00580823; iTF_00536115; iTF_00535970; iTF_00563827; iTF_00564003; iTF_00601139; iTF_00600981; iTF_00474582; iTF_00474431; iTF_00514816; iTF_00514975;
- 80% Identity
- iTF_00517793;