Basic Information

Insect: Drosophila subobscura
Gene Symbol: fru
Assembly: GCA_008121235.1
Location: NC:20048389-20054673[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.1e-12 7.7e-09 34.7 0.1 1 44 409 452 409 453 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.1e-12	7.7e-09	34.7	0.1	1	44	409	452	409	453	0.91

Sequence Information

Coding Sequence: ATGGGCGGGCCCACAGCGCCCGTGGCCAACAGCGAAGGCCAGACGTACTGCCTGCGTTGGAACAACCACCAGACAAATCTGGTGCAGATTCTGCACGCTCTGCACGAGGTCGGCAGCTATGTCGACTGCACCCTAGTCGTTGACGATGAGCAGTTCAAGGCACACCGTGTGGTTTTGGCGGCAAACTCGCCGTACTTCCAGCACATACTGCAGGAAGTGCCCCAGGACCAGTGCAGCATAATCCTGCCAGGAGTGAGGGGCTTCGAGATTGCGGCATTGCTACAGTACATGTACACGGGTGAGACCACGGTGACCAAGAGCCAGGAGCCGGAGATCTTGCGCActgccaaggagctgcaggtgAAGGGGCTCTACGACAATCTGATGAAGTACAACCACAAGGCGGCCAGCGCAGCGGAGGATCGTGCGCAAAGCCAGTTCCATGCCAGCATCACGCCGACATCCAGCTCGGGACTGGGCGGTGGCTCTGGCAAGCCCCTTAACGGGTCCTCTGCCGACGGCTcctttggccagcagcaccacaactCCTCCTCCGTGATCTCAACGTCCACGCATATCTCGCCCAGCGCCGCCATTTCGAGCAGCTGCtccccaccgccgccgccattcGGAGCCTACCAGCCACCGTATACAAACTTCCCGCCTGGAAGTGGAACTATCAATCCACATACCCATATTCCAGCCGGAGAGACTCCCCTGACGCCCACCCATTCGGCACCCCACGCCGTAGCCGGTGAGGCTGGACAGTGGCCTCTGTCAccctccgctgccgctgccgccatgCTAAACTCCGTGTATGAGTCCGCAGCCGACATGAATCCACTCAAACGCAAGAAACTCTCGGCAATCTCAAGCATGCTACTCAACAGTACCCGGGACACACCCATTCTGCGCAATGTGCTAGCCCAGGCAAACCCAGCTGACTCCTCGCAGCCAAACCCTCAGCTGCTGAAgagctcctccacctcctccctAAACGAGAAGACTCCCacccatcagcatcagcaacagcacccGCACCAGCATCACAGCGGAGGCGGAGTCGGCGTCAGCGTGAGCGGTGGTACCGGTAGCCACAGCTTCAACGGCTCGGACTACGGCGGTGACAAGGAGCCTCTATCACCACACACTGATCGTTCCTTTGATGAGGAGACGAGTGGGCCGGGCGGCAAGAAGCCAGAGTGGAAGCGTTATAAGCAATACACCCGGGCGGATATGATGTGTGCCATTCAGGCCGTTCGGGAAGGCATGAGCGCGCTCCAGGCGAGCCGCAAGTATGGACTGCCGAGCCGCACCCTCTACGACAAGGTTCGCAAGCTAAACATCACTACAGGTCGTGGCACGCATCGCACGCCCAAGCGTAGCCCACCCGGGGTGGAGTCTTCAGCCGCCTTTCCCTACTCcgcggcagccgctgccgcagctgcacaCAACTACGGTCATGTCCACGGGCATGGCCAGACGGATCTAGACCGTGAACCAAAGGAGCATGGCCAGCATAGTGGTCATATGGGCGGACACCACGGCATGCCACCCACTATTCCCCATTCGGCAGCCGCCCTTCTTGATCACGCCTTTCTACAGCAGGCCCTGGAGAATCGAGGCGGGGATATGGCCGGACGTGAAGCACTCCATGCCATGGccctggcagcggcagctcacGCAGCTGCCAACCGAATGTCTAGCAGCCCCCAAGAGTCTGGGTCGAATGGACACGCAGCCAGATCTCCAAATCCCAGGGCTCGCCACTACTCTGAGCACGAGGCTATGGAGATTGAGATGGAGAAGCACGAGCAACGCCTGATCAAGAGGGAGCGTGACCAGGATGAGCGCGAGGACGCTGACGATGAAGATGATcatgagcaggagcaggagcaggatcaGGATCACGATCATGACCATGTGGAAGATCTTTCGCTGGCACGCAAAGAACGCCCCGAGTCGCCATACTCTCCTCGGCCCCCACGGGCCTCCTCGCCGGTCGAGAGCGCCAGTGTTATCATGCACTCAAACAGCGCCTCCACCAATGGAAAGGATCACGAGGATTATCCCCACTCACCACCGCCCGTTGCTCTAGGTCTAGGCCTGAAGCGGGAGCTACTTGGCGGAGAGGATTCGCAGGCCAGAACCGACTGA
Protein Sequence: MGGPTAPVANSEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQHILQEVPQDQCSIILPGVRGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKYNHKAASAAEDRAQSQFHASITPTSSSGLGGGSGKPLNGSSADGSFGQQHHNSSSVISTSTHISPSAAISSSCSPPPPPFGAYQPPYTNFPPGSGTINPHTHIPAGETPLTPTHSAPHAVAGEAGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANPADSSQPNPQLLKSSSTSSLNEKTPTHQHQQQHPHQHHSGGGVGVSVSGGTGSHSFNGSDYGGDKEPLSPHTDRSFDEETSGPGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGVESSAAFPYSAAAAAAAAHNYGHVHGHGQTDLDREPKEHGQHSGHMGGHHGMPPTIPHSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSSSPQESGSNGHAARSPNPRARHYSEHEAMEIEMEKHEQRLIKRERDQDEREDADDEDDHEQEQEQDQDHDHDHVEDLSLARKERPESPYSPRPPRASSPVESASVIMHSNSASTNGKDHEDYPHSPPPVALGLGLKRELLGGEDSQARTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00611434;
90% Identity: iTF_00517637;
80% Identity: iTF_00601139;