Dbun000862.1
Basic Information
- Insect
- Drosophila bunnanda
- Gene Symbol
- -
- Assembly
- GCA_008042815.1
- Location
- VNKE01003659.1:279241-285273[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.6e-12 1.6e-08 34.0 0.0 1 40 527 567 527 570 0.90 2 4 4.2e-14 8.6e-11 41.3 0.1 2 39 582 619 581 622 0.94 3 4 9.7e-18 2e-14 52.9 0.0 1 45 636 681 636 681 0.98 4 4 9.9e-20 2e-16 59.3 0.0 1 43 688 731 688 732 0.97
Sequence Information
- Coding Sequence
- ATGGTtgagatggagatggaaacggttggaggtggaggtggaggcgaAGATGGCCAGCGAGGCCTCTTGCGCACCGCCGAACAATTAAAGATCAAGGGTCTCTGCGAAACCGCCGAGAATGCGGATGATTTAAACGACGCGGCCACAGCAACGATCACAGTATCGGAGAACATTCAGCAGGCGGTTGTGGGAAACATTGTGAATGCAACCATAGTTCCTGGAGCTTCTTCGCCCTCCctggaacagcagcagcagcagcaacaccatcaGTCACAGGGACAGGACCAGCAGCAGGTTCAtgcccagcaacagcagcagcaaatcaaCGCCGCCTTGCTGACGCAACACGGAGGAGTGCCAAGTGGCAGCAGTGGTGTCCCCCTATCTGGGCAGTTGTTGAGCTCCGCAGCAAGCGGCAGTAGCGGTAGCTCTGGTTCCGGCGGACAACAGACTTCACTAACGCCATCCGGCCTGCAGGCGACGCCACGCAAATCCCGGCTAAAGCGATCCAAGTCACCGGATTTGCCGACAGGTTCTGGTGCCTCAAGCAACTCGCagtcacagcagcagcagcagccgcagccggcACACCACCACCCCCACCAGACCATTCTCATCCAGGGCCAGAATCCCACCTCGATTGTTAGCCTCCAGCAGACGGCCGACGGCAATTATATACCGGTGGGAGCAGGAACTGGCGACGAATCGGACACCGAGAACGACCACGATCACGAGCACGAACACGAGCATATCCACGGGCACGGACACGGACATCCACACGGACACGGCCACAGTCACAgccacgaccacgaccacgatCACGAGCTCGAGAATAAGCCGAATAAGATCTGCAAGACGGAACAGTCGGTGGCATCGCCGGCGTCCAATTCATCGAGCGCCAACTCAAACAATGCAGCGGGCGTGAGCGGCGGCGTGTCCACCACCGGCAACCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACggaaaagatacaaaaaatatgactAGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTTACACCCGAGCCACCAGCACCATCCGCCACCCCAGTCACCGTTACGGAGCACGTCGATCTGTCCTGCAACCCCAGCACGGACACGCGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCCCAGCAAATACATCGGCTCGATCAGTCCCCCATGCACTCGATATCCCATCACCACACCGTGATGGAGATCGATCCGAGCCAAATTAAACACGAGCCGGGCATGATAATAACGCCAGAGATTGTCAACATGATGTCCTCAGGGCATATGGACATGTACAATTCGGACACGAGTGAGGATTCAATGATGATTGCCAACGGCTCGCCACACGATCAGAAGGAGCCGCACTATACGAATTTGGACCAGCAGCACGGTctgggcggcggcagcgtTTGTGGCCCGGGGCcaggtggtgctggtggtggtgggggcATGAGTGGTGGggctggctctggctctggcgaGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCATCCGCCATTTATGGCATCCCATCGACCACCCTGTGGCAACGTGCTCATCGTTTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCGTGGAACGAGGATGCTCTGCAGAATGCCTTGGAGGCGCTACGTTCGGGTCAGATATCCGCGAACAAAGCGTCCAAGGCCTTTGGCATACCCTCGTCGACGCTCTACAAGATTGCCCGACGGGAGGGCATCCGCCTTGCGGCACCGTTTAATGCCGCCCCAACCACGTGGACGCCCGAGGATCTGGAGCGTGCCTTGGAGGCGATACGGGCGGGTAATACATCGGTGCAGAAAGCAAGCGCCGAGTTCGGCATACCAACAGgaacacTTTATGGACGCTGCAAGCGGGAGGGCATTGAGCTGTCGCGTTCGAATCCAACGCCCTGGTCCGAGGATGCCATGAACGAGGCCCTCAACTCTGTGCGTGTCGGCCAAATGTCCATCAACCAGGCGGCCATTCACTACAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGTGGCAAATACGATGTGGTGGCCAATACGAGTGGCGTGGCGCTGCTCAACACCTCGGGCAATACCACCGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAACTCGTTGCACATGTTGCAGCAACAGTTCCCGTATAGTCCGTCGCCTCATCCACCAACGCCGCAGCATCACAGCACGCCGCAGCACCATAGCTCGGCGCAGGGGCCGCCAACGCCGCAgcacatgcagcagcaacagcacgtGGTGCATATGCAACAGCAGTCGCCCCATCCGGGTCACCATCCGCAGCACATGCAGCAGGATGTGGTGACATCAAGCAGCCAGGTGGTGCacagccaacagcagcagcagcagcttcagcagaTCTATCAGCACCACGGGACGCCGGAGCGTAGTTGA
- Protein Sequence
- MVEMEMETVGGGGGGEDGQRGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNATIVPGASSPSLEQQQQQQHHQSQGQDQQQVHAQQQQQQINAALLTQHGGVPSGSSGVPLSGQLLSSAASGSSGSSGSGGQQTSLTPSGLQATPRKSRLKRSKSPDLPTGSGASSNSQSQQQQQPQPAHHHPHQTILIQGQNPTSIVSLQQTADGNYIPVGAGTGDESDTENDHDHEHEHEHIHGHGHGHPHGHGHSHSHDHDHDHELENKPNKICKTEQSVASPASNSSSANSNNAAGVSGGVSTTGNQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGLGGGSVCGPGPGGAGGGGGMSGGAGSGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSAQGPPTPQHMQQQQHVVHMQQQSPHPGHHPQHMQQDVVTSSSQVVHSQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00590160; iTF_00511925; iTF_00529484; iTF_00492150; iTF_00531576; iTF_00540992;
- 90% Identity
- iTF_00590160; iTF_00492150; iTF_00531576;
- 80% Identity
- -