Dkur006478.1
Basic Information
- Insect
- Drosophila kurseongensis
- Gene Symbol
- -
- Assembly
- GCA_018153305.1
- Location
- JAECXX010000004.1:6215931-6222136[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4e-12 6.9e-09 35.2 0.0 1 40 644 684 644 687 0.90 2 4 6.1e-14 1.1e-10 41.0 0.1 2 39 699 736 698 739 0.94 3 4 1.4e-17 2.5e-14 52.7 0.0 1 45 753 798 753 798 0.98 4 4 1.4e-19 2.5e-16 59.0 0.0 1 43 805 848 805 849 0.97
Sequence Information
- Coding Sequence
- ATGCCCATGCCATCCCAAATCCTCCCCAGCTCCGCCTCCATCTCCTCCTTTGCAAAGGCGGGCCTCTTGCGCACCGCCGAGCAGCTAAAGATCAAAGGCCTCTGCGAAACCGCCGAGAACGCGGATGACCTCAACGACGCGGCCACAGCAACAATCACTGTTTCAGAGAACATTCAGCAGGCGGTCGTTGGTAATATTGTGAATGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCAACGCTGCCCTGCTGACCCAACACGGAGTGCCCAGCGGAAGTGTTTCCCTATCCGGGCAATTGCTTAGCTCCTCGGCCAGCGGTAGCAGCGGAAGCTCAGCCGGCGGACAGCAGGCTCCACAGACGCCATCCGGTTTGCAGCCGACGCCACGCAAGTCTCGACTTAAGCGCTCCAAATCGCCGGACTTGCCAACAGGCGGAGGAGCAGGAAGCTCTGGAGGCTCCAGCAGTTCTTCGTCGCAGCAGCAGCAACCCCAACCGGCGCACCACCATCACCCGCAGACCATTCTCATTCAGGGCCAAAATCCAAATTCTATTGTGAGCCTGCAGCAGACGGCCGACGGCAATTACATACCAGTGCCAGGAACTGGAGACGATTCAGACGTAGAGGATCACGACCACGAGCACGAGCACGGCCACGGACACGGGCACGGAGGACATCCGCACGGACACGGGCACGGCCACGATCACAGTCACGATCACGAGCACGAGAACAAGCCGAATAAAATCTGCAAGACCGAGCAATCGGTGGCCTCGCCGGCGTCTAATTCATCCAGCGCCTCAAACAATGCAGCGGGCGTGAGCGGCGTGACATCCACCGGCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGAGCCACCAGCACCATCCGCCACCCCAGTCACCGTCACGGAGCACGTCGATCTGTCCTGCAACCCCAGCACGGACACACGCGATCTATCAAATCCCACCGAACCGCTCGATATAGACAATCATCTGGCCCAGCAGATTCATCGGCTCGATCAGTCCCCCATGCACTCGATATCTCATCACCACACTGGCGATGAAAGCAACTCGAATCTGGTTCAGCACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTGTGCACGGCCAGCATGGGGGACATGTGACGCACGCCGACATCAGTGGTGCCACAGTCATGGAGATTGATCCGAGCCAGATTAAACACGAGCCGGGCATGATAATAACGCCAGAGATTGTCAACATGATGTCCTCAGGGCATATGGACATGTACAATTCGGACACGAGCGAGGATTCGATGATGATCGCCAACGGCTCGCCGCATGATCAGAAGGAGCCACACTATACGAATTTGGACCAGCAACACGGGCTGGGTGGCAGCGTTTGCGGCCCGGGGCCCGGCGGTGCTGGTGGTGGTGGGGGCATGAGTGGTGGGGCTGGCTCTGGCTCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCGTCCACCATTTATGGCATCCCATCGACCACCCTGTGGCAACGTGCTCATCGCCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCGTGGAACGAGGATGCCCTGCAGAATGCCTTGGAGGCGCTGCGTTCGGGTCAGATATCCGCGAACAAAGCGTCGAAGGCTTTCGGCATCCCCTCCTCGACGCTCTACAAGATTGCCCGGCGCGAGGGCATCCGCCTTGCGGCGCCCTTCAATGCCGCCCCAACCACGTGGACGCCCGAGGATCTGGAGCGAGCCTTGGAGGCGATACGGGCGGGTAATACCTCAGTGCAGAAAGCCAGCGCTGAATTTGGCATACCCACAGGAACACTTTACGGACGCTGCAAACGGGAGGGCATTGAGCTGTCGCGTTCGAATCCAACGCCCTGGTCCGAGGATGCCATGAACGAGGCCCTGAACTCAGTGCGCGTTGGCCAAATGTCCATCAACCAGGCGGCCATTCACTATAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGCGGGAAATACGACGTGGTGGCCAACACGAGTGGCGTGGCGCTCCTCAACACCTCGGGCAACACCACCGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAATTCGTTGCATATGTTACAGCAACAGTTCCCGTACAGCCCTTCGCCGCATCCGCCAACTCCTCAGCACCACAGCACACCACAGCACCACAGTACGCCGCAAGGTCCTCCGACGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTATCAGCACCACGGGACGCCGGAGCGTAGTTGA
- Protein Sequence
- MPMPSQILPSSASISSFAKAGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAALLTQHGVPSGSVSLSGQLLSSSASGSSGSSAGGQQAPQTPSGLQPTPRKSRLKRSKSPDLPTGGGAGSSGGSSSSSSQQQQPQPAHHHHPQTILIQGQNPNSIVSLQQTADGNYIPVPGTGDDSDVEDHDHEHEHGHGHGHGGHPHGHGHGHDHSHDHEHENKPNKICKTEQSVASPASNSSSASNNAAGVSGVTSTGQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTGDESNSNLVQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVHGQHGGHVTHADISGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGLGGSVCGPGPGGAGGGGGMSGGAGSGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASTIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSTPQGPPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00491430;
- 90% Identity
- iTF_00588058;
- 80% Identity
- -