Dbur003405.1
Basic Information
- Insect
- Drosophila burlai
- Gene Symbol
- -
- Assembly
- GCA_008042655.1
- Location
- VNJT01002774.1:31181-38518[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.7e-12 1.8e-08 34.0 0.0 1 40 538 578 538 581 0.90 2 4 4.3e-14 1e-10 41.2 0.1 2 39 593 630 592 633 0.94 3 4 1e-17 2.3e-14 52.9 0.0 1 45 647 692 647 692 0.98 4 4 1.2e-19 2.7e-16 59.0 0.0 1 43 699 742 699 743 0.97
Sequence Information
- Coding Sequence
- ATGGAAGTGGAGGTGGATGGAGGTAGTAGAGATGTAGAGGGCGAGGGCCATGGCCTCTTGCGCACCGCCGAACAGCTAAAGATCAAGGGCCTCTGCGAAACCGCCGAGAATGCAGATGACTTGAACGACGCGGCCACAGCAACGATCACAGTATCGGAGAACATTCAGCAGGCGGTTGTGGGAAATATTGTGAATGCAACCATAGTTCCTGGAGCTCCTTCGCCCTCCttggaacagcagcagcaacatcaccaGTCacaggaccagcagcagcagcaaatcaACGCCGGCTTGCTGACACAacacggaggaggaggagtgcccagtggcagcagcagtggtGGTGTTCCCCTATCCGGACAATTGTTGAGCTCTGCGGCCAGCGGCACTAGCAGCTCCGGTTCCGGCGGACAGCAGACTTCACTGACGCCATCCTCCGGCCTGCAGGCGACGCCACGAAAGTCACGGCTAAAGCGATCCAAGTCACCGGATTTGCCGACAGGTTCTGGAAGCTCGGGTGGCGGCTCAAGCAGCTCACagtcacagcagcagcagcaaccgcagcCGGCGCACCACCATCCCACCCACCAGACCATTCTCATCCAGGGCCAGAATCCCACCTCGATTGTTAGCCTGCAGCAGACGGCCGACGGCAATTATATACCGGTGGGAGCAGGCACAGGCGACGAGTCGGACACTGAGAACGATCACGATCACGAGCACGAACACGAGCATATCCACGggcacggacacggacacggacatcCACACGGAGGAGGACACGGCCatagtcacagtcacagtcacgaTCACGACCACGATCACGACGATCACGAGCTCGAGAATAAACCGAATAAGATTTGCAAGACGGAACATCATTCGGTGGCATCGCCGGCGTCCAATTCATCCAGCGCCAACTCAAACAATGCAGCGGGCGTGAGCGGCGGCGtgtccaccaccaccaccaccggcaaCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACggaaaagatacaaaaaatatgactAGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTTACACCCGAGCCACCAGCACCATCCGCCACCCCAGTCACCGTTACGGAGCACGTCGATCTGTCCTGCAACCCCAGCACGGACACGCGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCCCAGCAAATACATCGGCTCGATCAGTCCCCCATGCACTCGATATCCCATCACCACACCGGCGACGAGAGCAACTCGAATCTGGTGCAGCACATCAAGAGCGAGCCGGGCATGATAATAACGCCAGAGATTGTCAACATGATGTCCTCCGGACATATGGACATGTACAATTCGGACACGAGCGAGGATTCAATGATGATCGCCAACGGCTCGCCACACGATCAGAAGGAGCCGCACTATACGAATTTGGACCAGCAGCACGGTctgggcggcggcagcgtTTGTGGCCCGGGGCcaggtggtgctggtggtggtgggggcATGAGTGGTGgggctggctctggctctggcgaGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCGTCCGCCATTTATGGCATCCCATCGACCACCCTGTGGCAACGTGCTCATCGTTTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCGTGGAACGAGGATGCTCTGCAGAATGCCTTGGAGGCGTTACGTTCGGGTCAGATATCCGCGAACAAAGCGTCCAAGGCCTTTGGCATACCCTCGTCGACGCTCTACAAGATCGCCCGACGGGAGGGCATCCGCCTTGCGGCACCGTTCAATGCCGCCCCAACCACGTGGACGCCCGAGGATCTGGAGCGTGCCTTGGAGGCGATACGGGCGGGTAATACATCGGTGCAGAAAGCAAGCGCCGAGTTTGGCATACCAACAGgaacactTTATGGACGCTGCAAGCGGGAGGGCATTGAGCTGTCGCGTTCGAATCCAACGCCCTGGTCCGAGGATGCCATGACCGAGGCCCTCAACTCTGTGCGTGTCGGCCAAATGTCCATCAACCAGGCGGCCATTCACTACAACCTGCCCTACAGCTCGCTTTACGGCCGCTTCAAGCGTGGCAAATACGATGTGGTGGCCAATACGAGTGGCGTGGCGCTGCTCAACACCTCGGGCAATACCACCGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAACTCGTTGCACATGTTGCAGCAACAGTTCCCGTACAGCCCGTCGCCTCATCCGCCAACGCCGCAACATCACAGCACGCCGCAGCACCATAGCTCGGCGCAGGGGCCGCCGACGCCGCAgcacatgcagcagcagcaacagcacgtGGTGCATATGCAACAGCAGTCGCCCCATCCGGGCCACCATCCGCAGCACATGCAGCAGGATGTGGTCACATCGAGTAGCCAGGTGGTGCacagccaacagcagcagcagcagcagcagcagcttcagcagaTCTATCAGCACCACGGGACGCCGGAGCGTAGTTGA
- Protein Sequence
- MEVEVDGGSRDVEGEGHGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNATIVPGAPSPSLEQQQQHHQSQDQQQQQINAGLLTQHGGGGVPSGSSSGGVPLSGQLLSSAASGTSSSGSGGQQTSLTPSSGLQATPRKSRLKRSKSPDLPTGSGSSGGGSSSSQSQQQQQPQPAHHHPTHQTILIQGQNPTSIVSLQQTADGNYIPVGAGTGDESDTENDHDHEHEHEHIHGHGHGHGHPHGGGHGHSHSHSHDHDHDHDDHELENKPNKICKTEHHSVASPASNSSSANSNNAAGVSGGVSTTTTTGNQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTGDESNSNLVQHIKSEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGLGGGSVCGPGPGGAGGGGGMSGGAGSGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSAQGPPTPQHMQQQQQHVVHMQQQSPHPGHHPQHMQQDVVTSSSQVVHSQQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00491430;
- 90% Identity
- iTF_00491430;
- 80% Identity
- -