Druf011395.1
Basic Information
- Insect
- Drosophila rufa
- Gene Symbol
- -
- Assembly
- GCA_018153105.1
- Location
- JAECXS010000002.1:15405949-15414285[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.1e-10 5.9e-07 28.9 0.0 7 40 510 544 509 547 0.87 2 4 3.6e-14 6.8e-11 41.5 0.1 2 39 559 596 558 599 0.94 3 4 8.3e-18 1.6e-14 53.1 0.0 1 45 613 658 613 658 0.98 4 4 8.4e-20 1.6e-16 59.5 0.0 1 43 665 708 665 709 0.97
Sequence Information
- Coding Sequence
- ATGGTAGAGCTGGAGATGCCGATGTGGGTGGGCCTCTTGCGCACCGCCGAACAATTAAAGATCAAGGGCCTGTGCGAGACCGCCGAGAATGCGGATGACTTGAACGACGCGGCCACAGCAACGATCACAGTTTCGGAGAACATTCAGCAGGCGGTTGTTGGTAACATTGTGAATGCCACCATAGTTCCTGGAGCACCATCGCCCTCCCTGGAACAGCAGCAGCAGCAGCAACACCACCAATCCCAGGCACAGCAGGACCAGCAGGTGCAGCAAATAAACAGCGCTCTGCTGACGCAACACGGAGGAGTGCCCAGCAGCGGTGTTCCCCTAACCGGACAGTTGTTGAGCTCCGCAGCGAGCGGCAGTAGCGGTAGCTCCGGCTCCGGCGGACAGCAGACTTCACTGACGCCATCGTCCGGCCTGCAGTCGACGCCGCGCAAGTCCCGGTTAAAGCGATCCAAGTCACCGGATTTGCCGACAGGCTCTGGAAGCTCTGGTGGCTCGAGCAGCTCACAGTCACAGCAGCAGCAGCAGCAGCCGGCTCCAGCACACCACCATCCCCACCAGACCATACTCATCCAGGGCCAGAATCCCACCTCGATTGTTAGCCTGCAGCAGACGGCCGACGGCAACTATATACCGGTCGGAGCAGGAACTGGCGACGAATCGGACACCGAGAACGATCACGATCACGAGCACGAACACGAGCATATCCACGGCCACGGACACGGACACGGGCATCCGCACGGACACGGACACGGTCACAGTCACAGTCACGACCACGACCACGACCACGACCACGATCACGATCACGAGCTCGAGAATAAACCGAACAAGATCTGCAAGACGGAACAGTCGGTGGCCTCGCCGGCGTCCAATTCATCGAGCGCCAACTCAAACAATGCAGCGGGCGTGAGCGGCGGCGTGTCCACCACCGGCAACCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTTACACCCGAGCCACCAGCACCATCCGCCACCCCAGTCACCGTTACGGAGCACGTCGATCTGTCCTGCAACCCCAGCACGGACACGCGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCCCAGCAAATCCATCGGCTCGATCAGTCCCCCATGCACTCGATATCCCATCACCATACCGGCGACGAGAGCAACTCGAATCTGCCGGGCATGATAATAACGCCAGAGATTGTCAACATGATGTCCTCAGGGCATATGGACATGTACAATTCGGACACGAGCGAGGATTCAATGATGATCGCCAACGGCTCGCCGCACGATCAGAAGGAGCCGCACTATACGAATTTGGATCAGCAGCACGGTCTGGGCGGTGGCAGCGTTTGTGGCCCGGGGCCAGGTGGTGCTGGTGGTGGTGGGGGCATGAGTGGTGGGGCTGGCTCTGGCTCTGGCGAGAAAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCGTCCGCCATTTATGGCATCCCATCGACCACCCTGTGGCAACGTGCTCATCGTTTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCATGGAACGAGGATGCTCTGCAGAATGCCTTGGAGGCGTTACGTTCGGGTCAGATATCCGCGAACAAAGCGTCCAAGGCCTTTGGCATACCCTCATCGACGCTCTACAAGATTGCCCGGCGGGAGGGCATCCGCCTAGCGGCACCGTTCAATGCCGCCCCAACCACGTGGACGCCCGAGGATCTGGAGCGTGCCTTGGAGGCGATACGGGCGGGTAATACATCGGTGCAGAAAGCAAGCGCCGAATTTGGCATACCAACAGGTACACTTTACGGACGCTGCAAGCGGGAGGGCATTGAGCTGTCGCGTTCGAATCCGACGCCTTGGTCCGAGGATGCCATGAACGAGGCCCTCAACTCTGTGCGCGTCGGCCAAATGTCCATCAACCAGGCGGCCATTCACTATAACCTGCCCTACAGCTCGCTCTATGGCCGCTTCAAGCGTGGCAAATACGATGTCGTGGCCAATACGAGTGGCGTGGCGCTGCTCAACACCTCGGGCAATACCACCGGCAGCATTGAGATTATAGAGCACAGTCAGGAGAATTCGTTGCACATGTTGCAGCAACAGTTCCCGTACAGTCCTTGA
- Protein Sequence
- MVELEMPMWVGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNATIVPGAPSPSLEQQQQQQHHQSQAQQDQQVQQINSALLTQHGGVPSSGVPLTGQLLSSAASGSSGSSGSGGQQTSLTPSSGLQSTPRKSRLKRSKSPDLPTGSGSSGGSSSSQSQQQQQQPAPAHHHPHQTILIQGQNPTSIVSLQQTADGNYIPVGAGTGDESDTENDHDHEHEHEHIHGHGHGHGHPHGHGHGHSHSHDHDHDHDHDHDHELENKPNKICKTEQSVASPASNSSSANSNNAAGVSGGVSTTGNQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTGDESNSNLPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGLGGGSVCGPGPGGAGGGGGMSGGAGSGSGEKALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00491430;
- 90% Identity
- iTF_00491430;
- 80% Identity
- -