Dmay004497.1
Basic Information
- Insect
- Drosophila mayri
- Gene Symbol
- -
- Assembly
- GCA_008042485.1
- Location
- VNJN01010211.1:28839-35148[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.7e-12 1.3e-08 34.2 0.0 1 40 445 485 445 488 0.90 2 4 3.7e-14 7.4e-11 41.4 0.1 2 39 500 537 499 540 0.94 3 4 8.6e-18 1.7e-14 53.1 0.0 1 45 554 599 554 599 0.98 4 4 8.8e-20 1.8e-16 59.4 0.0 1 43 606 649 606 650 0.97
Sequence Information
- Coding Sequence
- ATGCCcgagatggagatggaaatGGGCCTCTTGCGCACCGCCGAACAACTAAAGATCAAAGGGCTCTGCGAAACCGCCGAGAATGCGGATGATTTAAACGACGCGGCCACAGCAACGATCACAGTTTCGGAAAATATTCAGCAGGCGGTTGTGGGAAACATTCAGACTTCACTGACGCCATCCGGCGGCCTGCAGGCGACGCCACGCAAGTCTCGGCTAAAGCGATCCAAATCACCGGATTTGCCGACAGGTTCTGGGAACTCTGGTGCCTCAAGCAACACACAGTCACAGCAGCAACCGCAGCCAGCACACCACCATCCCCACCAGACAATTCTCATCCAGGGCCAGAATCCCACCTCGATTGTTAGCCTACAGCAGACGGCCGACGGCAACTATATACCCGTGGGAGCCGGCACTGGTGACGAATCAGACACCGAGAACGATCACGACCAGGAACACGAGCATATCCACgggcacggacacggacaTCCGCACGGACACGgccacagtcacagtcacgACCACGATCACGACCACGAGCTAGAGAATAAACCGAATAAGATCTGCAAGACGGAACATTCGGTGGCATCGCCGGCTTCCAATTCATCGAGCGCCAACTCAAACAATGCAGCGGGCGTGAGCGGCGGCGTGTCCACCACCGGCAACCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACggaaaagatacaaaaaatatgactaGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTTACACCCGAGCCACCAGCACCATCCGCCACCCCAGTCACCGTTACGGAGCACGTCGATCTGTCCTGCAACCCTAGCACGGACACTCGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCTCAGCAAATACATCGGCTCGATCAGTCCCCCATGCACTCGATATCTCATCACCATACCGGCGATGAGAGCAACTCGAATCTGGTGCAGCACATCAAAATCATGGAGATCGATCCGAGCCAAATTAAACACGAGCCGGGCATGATAATAACGCCAGAGATTGTCAACATGATGTCCTCAGGACATATGGACATGTACAATTCGGATACGAGCGAGGATTCAATGATGATCGCCAACGGCTCGCCACATGATCAGAAGGAGCCGCACTATACGAATTTGGACCAGCAGCACGGTCTGGGCGGCGGCAGCGTTTGTGGCCCGGGGCcaggtggtgctggtggtggtgggggcATGAGTGGTGGggctggctctggctctggcgaGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCGTCCGCCATTTATGGCATCCCATCGACCACCCTGTGGCAACGTGCTCATCGTTTGGGCATCGAAACGCCCAAGAAGGAGGGCGGAACCAAATCATGGAACGAGGATGCTCTGCAGAATGCCTTGGAGGCGTTACGTTCGGGTCAGATATCCGCGAACAAAGCGTCCAAGGCCTTTGGCATACCCTCGTCGACGCTCTACAAGATTGCCCGACGGGAGGGCATCCGCCTTGCGGCACCGTTTAATGCCGCCCCAACCACGTGGACGCCCGAGGATCTGGAGCGTGCCTTGGAGGCGATACGGGCGGGTAATACATCGGTGCAGAAAGCCAGTGCCGAATTTGGCATACCAACAGgaacactTTATGGACGCTGCAAGCGGGAGGGCATTGAGCTGTCGCGCTCGAATCCAACGCCCTGGTCCGAGGATGCCATGAACGAGGCCCTCAACTCTGTGCGTGTCGGCCAAATGTCCATCAACCAGGCGGCCATCCACTACAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGAGGCAAATACGATGTGGTGGCCAATACGAGTGGCGTGGCGCTGCTCAACACCTCGGGCAATACCACCGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAATTCGTTGCACATGTTGCAGCAACAGTTCCCGTATAGTCCGTCGCCTCATCCGCCAACACCGCAACATCACAGCACGCCGCAGCATCATAGCTCGGCGCAGGGGCCGCCAACGCCGCAGCAcatgcaacagcaacagcacgTGGTGCATATGCAACAACAGTCGCCCCATCCAGGTCACCATCCGCAGCACATGCAGCAGGATGTGGTCACATCGAGCAGCCAGGTGGTGCAtagccaacagcagcagcagcagcttcagcaGATCTATCAGCACCACGGGACGCCCGAGCGTAGTTGA
- Protein Sequence
- MPEMEMEMGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIQTSLTPSGGLQATPRKSRLKRSKSPDLPTGSGNSGASSNTQSQQQPQPAHHHPHQTILIQGQNPTSIVSLQQTADGNYIPVGAGTGDESDTENDHDQEHEHIHGHGHGHPHGHGHSHSHDHDHDHELENKPNKICKTEHSVASPASNSSSANSNNAAGVSGGVSTTGNQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTGDESNSNLVQHIKIMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGLGGGSVCGPGPGGAGGGGGMSGGAGSGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSAQGPPTPQHMQQQQHVVHMQQQSPHPGHHPQHMQQDVVTSSSQVVHSQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00491430;
- 90% Identity
- iTF_00488583;
- 80% Identity
- -