Basic Information

Insect: Drosophila biarmipes
Gene Symbol: -
Assembly: GCA_018148935.1
Location: JAECYG010000101.1:16875117-16879704[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00015 0.0089 16.2 1.2 1 23 70 93 70 93 0.96

2 13 0.0052 0.31 11.3 3.4 2 23 142 164 138 164 0.90

3 13 0.0066 0.39 11.0 0.8 1 23 258 281 258 281 0.93

4 13 0.035 2.1 8.8 2.4 2 23 330 351 329 352 0.94

5 13 0.00042 0.025 14.8 0.2 1 23 421 444 421 444 0.92

6 13 1.8 1e+02 3.4 0.1 2 14 463 475 462 487 0.85

7 13 0.0006 0.036 14.3 3.3 2 23 495 517 495 517 0.96

8 13 0.00034 0.02 15.1 0.2 1 23 659 682 659 682 0.93

9 13 0.0021 0.13 12.6 1.5 2 23 732 754 731 754 0.95

10 13 0.016 0.97 9.8 1.8 1 23 842 865 842 865 0.91

11 13 0.026 1.5 9.2 1.2 1 21 917 937 917 938 0.95

12 13 1.5 87 3.6 0.2 3 23 972 995 970 995 0.81

13 13 4.9 2.9e+02 2.0 0.1 1 9 1013 1021 1013 1026 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00015	0.0089	16.2	1.2	1	23	70	93	70	93	0.96
2	13	0.0052	0.31	11.3	3.4	2	23	142	164	138	164	0.90
3	13	0.0066	0.39	11.0	0.8	1	23	258	281	258	281	0.93
4	13	0.035	2.1	8.8	2.4	2	23	330	351	329	352	0.94
5	13	0.00042	0.025	14.8	0.2	1	23	421	444	421	444	0.92
6	13	1.8	1e+02	3.4	0.1	2	14	463	475	462	487	0.85
7	13	0.0006	0.036	14.3	3.3	2	23	495	517	495	517	0.96
8	13	0.00034	0.02	15.1	0.2	1	23	659	682	659	682	0.93
9	13	0.0021	0.13	12.6	1.5	2	23	732	754	731	754	0.95
10	13	0.016	0.97	9.8	1.8	1	23	842	865	842	865	0.91
11	13	0.026	1.5	9.2	1.2	1	21	917	937	917	938	0.95
12	13	1.5	87	3.6	0.2	3	23	972	995	970	995	0.81
13	13	4.9	2.9e+02	2.0	0.1	1	9	1013	1021	1013	1026	0.84

Sequence Information

Coding Sequence: ATGAGCCTGGCAGAGCCACAGCATCCGGTTTTGGCTCCAGCTGGACCAATGGCCCATCCATTGCGTCCCCCCATGCAGCGCCACTCGTTTCCCGGCCAAGTGGGTCGTCCCAGACTGGGTCCTGGACTCTCTGTGCGGCCCACGACCTCGCAGATTAATGCCACCGATGAGAACGGTGTACTCATCAACTACGAGCTGGGCGTGGTCTATATATGCCCCGCCTGCGGCGGTGAGTTTCGGCAACAGGACCACTGGAAGCGGCACATGAACCACATCCACAAGTACAACACCCTGCGCGGTCTGAACTTCACGCCGCTGGACAAGCTCTATCAGCGCTGCAGGGAGTGTAACAAGCGTATCGCCATGCACAGCCGGGAGAACCTGCTGAAGCACAAGTTCACGCACCTGCCCTTCAGGTGCACCAAGTGCTACCTCTGCAAGCGGGAGTACAAGTACAGGCAAGACCTAATGGTGCACCTGCGCATGGTTCATTGCGACGAAGTGGTGGCCATGATGCGGGAGGGCTACAATGCTGCGGGACGCAAGACACGGGTTCGCGAATCACGCACCGAGCAGTTGCAGCGGGAGAAGAGTTTCCGAGAGAATAATGACTTCGAGGAGGACCTAGATCACATCGAGGTGCGGAATGAGCTGCTCGAGCCGGATGGCGATGAGGTTGTGCCCCTGGAGCAGCCTTTGCCCGGGGAGGTTGCCAAGAAAAAATCGACTAGCAGTCGAGGAGCAGCCGAACTCTGCGAGGACTACATACACTACATGTGCCCTGACTGCGGCACCGAGTGCGACACCCACGCCCAGTGGAGCCAGCACATCGAGTTCGTTCACGACTATGTCAGCCGGCGGGGACTCAATTTCCGGAGCGTGGACATGCAGATGCAGTGCCTGGAGTGCAAAAAGATCGTGACCCCCAACACCATTAAATCGTTGCGCGCCCACAAATTCAGCCATTTGTCGCAGCCCCAGTGGGTGCGCTGTAAACTGTGCTACAAGGGCTACACGGATCATCAGGAAGTGATCAGACATCTGCTTTTGCATCATCATATGAACACGCTGATGACCGAGGATTCTGAGGAAGACGCTGAAGCTCCGTTGACCATAATGGCGGAGGACGAATGCGGCGAGGATGGAGGAAACGGCGAGGGAAATGGCGCTCTCTTGGACGAAGACTCACCCTACTTTGAGGACGCTCCCAGACGCGGCGGTCGCATCAGCAGCGACGACATTTTCGAGCCCCACATCGATTATCTCTGTCCGCAGTGCGGCAAGGAGTTCATTGAGAAGAAGCATTGGCGCGCCCATGTGGTTATGGCCCACAACATGAACGATCTGACCAAGCTGAATTTCGAGATGATCAACGAACGGCAGCTGAAGTGCACTGAGTGCGACAAAATCATTACCAATGCTTACGGCATCCAGAATGCCCAGCAGCACAGGATCACGCATCTTCCATTCAAGGCGTACGCTAGGTGTCGCAAGTGTCACAAGTCATACACAGACAGAAAGGGTCTCGTGAAGCATCTGGCCACCTATCATCGCGTTGGGTGCCCACAAAAGCCGGGAGGACCTGGACCACCAGCTCCGATTTTGACGCCCGCCAAGCAGCCGCGCAAGCAGATCGTGACTGTAGCCAATGAAACGTACGAGATAATCTACCTGGACGATGTTGAGCAAGGAAGCATGGAGGAGGAAAACGACTTTGGCGAACAGATGCAGGCGGAGGAGGAAGATTTTCCAATTGCTCAGCCTTCATCGCCACCATCACCAGCCCCACATAAAAATAAACATCGCTACAAGTGCATACACTGCTCCGCACTCTTTCCCACAACGGCAGCCGTCCGGAATCACCTCATCGATACCCGGTGCAGGAAGGCGGATCTGAAAAGGCGTCGACAGAAACTGCTGAACGCGCGAGCAACGGACCCAACTTCTTGTCCTACCGTGGAGCAAAGCTACATCTTCCTGTGCCCCTCTTGCGGCATGGAGTACAAGACCCAGTACGAGTGGCGTCGTCACATCAACGAGGTGCATAACTTTGACAAGCGACATTACCTAAACATGCGGCAGTTGGATAAGTTTAGATACCAGTGTACCCAGTGCAATGATATTGTGGCCAACTCCAAGCTGAAGGGCTTGCAGGACCATCACTTCCGCCACCTACCCTACCGGCTGTATCTAAAGTGCCTGATCTGCGGCACCTGCTACAATCACAAGCCGAACATAGCTGCACATTTGAGGGCCCGTCACGGCGTCTACGACAGGGAGACGCTGCCGATGATCACCAAACCGAAAAAGGAATATGGCCGCTACAGTCGGGAGAAGCCCAGACTGCCCACCCCACCACCGGCAGCGCCCTCTCCACCGGGTTGCTCCTCCTCTGTTGCGACCTTGGGGAGCAGTCGTTCCTTGAAACCACAGCCTGGTGGCTTGCCAACCCGACCGGCTGGTCTCAACACGCTGGAGGACAGCATCTCGTACCACAACGCCGTGGATTTGGACTTCATCACATACTTCTGTCCCAAGTGTAATCAGAACTTTGACTCCCATGCCTTCTGGCGCAAACACATCGTAGAGCAGCACAACTTTAACAGCCGCGAGGGCCTTAATTTCCGGCAGATCGATAACCATCACTACCTGTGCCTGGAGTGCTACAAGCGGGTGACTGTGACCCACACCAAGGGCGCCATTGGGCAGCTGCAGTCGCACAAGTTCCGCCACTTGCCGCACCGATCCTTCAAGTGCTTGACTTGCGACGGCGAGTTTGTGCGAAAGCAAATGTTCTTCAAGCACCTGAATCGTGACACCAATCGATGTGACAATCGACCGCACCGCGAATTGGATGACGATGACACGGAGCAGGAGCAGGAGACGCAGCTGCGGTCCATATACCACCTGGCGTGTCCGCAGTGCGGAGACAACTTTTCAACCACCAGCAAAAAGCTGTGGCGCGAACACATCAACGATTTCCACGGCCTCGGCAAGCTGGACATTTTGCACATGGACAAGGTGGGCAAGAACCTTTATCGATGCCAGGACTGTGACGAGGAGCTGCAGACAAACCGACCGTGGGTGCTGCAGTTCCATCGATTCCAGCACCTGCCCCACCCGGCCTACATCCGTTGCAAGCTGTGCAAAGAGAGCAGTGAGGCGGGTGCTGCAGCGGCGGGAGAGTTTCACAGCCTTCGTGAGCTGCAGCAGCACCTCCGTAAGCACCATCCTGTGGTGGGCGAAAACGAGATGATATTACTCCGTGAGCAAATAGCCATGGAAGAGAAAGAACAGGAGGGGGCCACGGAACTGGCCACGGGCGGGGAGAACCAAGCTACTCAAGATTCAGGACCGTATATGCCGTTGCCGCCGCATTTATTAGACGACGGAGACGACGTGGAATTCGAGGACCAGTATCTGCTGGGCTAG
Protein Sequence: MSLAEPQHPVLAPAGPMAHPLRPPMQRHSFPGQVGRPRLGPGLSVRPTTSQINATDENGVLINYELGVVYICPACGGEFRQQDHWKRHMNHIHKYNTLRGLNFTPLDKLYQRCRECNKRIAMHSRENLLKHKFTHLPFRCTKCYLCKREYKYRQDLMVHLRMVHCDEVVAMMREGYNAAGRKTRVRESRTEQLQREKSFRENNDFEEDLDHIEVRNELLEPDGDEVVPLEQPLPGEVAKKKSTSSRGAAELCEDYIHYMCPDCGTECDTHAQWSQHIEFVHDYVSRRGLNFRSVDMQMQCLECKKIVTPNTIKSLRAHKFSHLSQPQWVRCKLCYKGYTDHQEVIRHLLLHHHMNTLMTEDSEEDAEAPLTIMAEDECGEDGGNGEGNGALLDEDSPYFEDAPRRGGRISSDDIFEPHIDYLCPQCGKEFIEKKHWRAHVVMAHNMNDLTKLNFEMINERQLKCTECDKIITNAYGIQNAQQHRITHLPFKAYARCRKCHKSYTDRKGLVKHLATYHRVGCPQKPGGPGPPAPILTPAKQPRKQIVTVANETYEIIYLDDVEQGSMEEENDFGEQMQAEEEDFPIAQPSSPPSPAPHKNKHRYKCIHCSALFPTTAAVRNHLIDTRCRKADLKRRRQKLLNARATDPTSCPTVEQSYIFLCPSCGMEYKTQYEWRRHINEVHNFDKRHYLNMRQLDKFRYQCTQCNDIVANSKLKGLQDHHFRHLPYRLYLKCLICGTCYNHKPNIAAHLRARHGVYDRETLPMITKPKKEYGRYSREKPRLPTPPPAAPSPPGCSSSVATLGSSRSLKPQPGGLPTRPAGLNTLEDSISYHNAVDLDFITYFCPKCNQNFDSHAFWRKHIVEQHNFNSREGLNFRQIDNHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPHRSFKCLTCDGEFVRKQMFFKHLNRDTNRCDNRPHRELDDDDTEQEQETQLRSIYHLACPQCGDNFSTTSKKLWREHINDFHGLGKLDILHMDKVGKNLYRCQDCDEELQTNRPWVLQFHRFQHLPHPAYIRCKLCKESSEAGAAAAGEFHSLRELQQHLRKHHPVVGENEMILLREQIAMEEKEQEGATELATGGENQATQDSGPYMPLPPHLLDDGDDVEFEDQYLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00602953; iTF_00505720; iTF_00548410; iTF_00588464; iTF_00494706; iTF_00529875; iTF_00512319; iTF_00507930; iTF_00578912; iTF_00515840;
90% Identity: -
80% Identity: -