Basic Information

Gene Symbol
hang
Assembly
GCA_008121215.1
Location
CM017796.1:17812061-17827228[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.26 17 5.8 1.0 3 23 294 315 293 315 0.93
2 18 0.16 11 6.4 2.7 3 22 423 442 421 442 0.89
3 18 0.00055 0.038 14.2 3.3 1 22 546 567 546 569 0.90
4 18 0.064 4.3 7.7 0.1 2 21 581 600 580 601 0.93
5 18 0.00064 0.044 14.0 0.2 2 23 735 757 734 757 0.95
6 18 0.0018 0.13 12.6 0.1 1 23 765 788 765 788 0.96
7 18 0.00024 0.016 15.4 0.2 2 23 874 895 873 895 0.97
8 18 0.00026 0.018 15.2 2.9 2 23 1005 1027 1004 1027 0.97
9 18 0.021 1.4 9.3 0.2 2 23 1036 1058 1035 1058 0.95
10 18 0.0041 0.28 11.5 0.2 1 23 1071 1094 1071 1094 0.97
11 18 0.00012 0.0079 16.4 1.1 1 23 1167 1189 1167 1189 0.99
12 18 0.0018 0.12 12.6 0.9 1 23 1197 1220 1197 1220 0.96
13 18 0.32 22 5.5 0.5 2 19 1228 1245 1227 1246 0.92
14 18 2.2e-05 0.0015 18.6 1.8 3 23 1330 1350 1329 1350 0.98
15 18 0.00064 0.043 14.0 0.2 1 23 1385 1407 1385 1407 0.97
16 18 5.7e-05 0.0039 17.3 0.6 2 23 1499 1521 1498 1521 0.93
17 18 0.0041 0.28 11.5 0.5 3 23 1577 1597 1577 1597 0.98
18 18 9.4e-05 0.0064 16.6 2.1 1 23 1918 1940 1918 1940 0.98

Sequence Information

Coding Sequence
ATGTGCGACACGGCAACAACAGCTACAGCAGTGGCTACAACTGTGGGAGCGTCGTTGGTGTCTGTCACTGGAACGAGCCAGGGAACGGCAGTGGctacagcgacagcagcaggagccacACCGCCAGCTACAACCACAGCGAAACCCGAGCAACAGCGGGCGCGACAAAACTGCTGCCGCCTCTGCATTGCCCCGGCCACGGAATGCATTTCGATCATCAATAGCTATGCGGCCGACAAGGAGCCGCTCTCTACAAAAATCCACAACTGTGTGAACATCAAGATAACACCGCAAGATCGGCTGTCACTTCAGATCTGCCACGCCTGCATCAGTTACCTTAACTCGTGGCAGAGTTTCAAGAATCGCTCGGTTAGCGCACAAAGCAAACAGCGCCAGTGGCTGGAGGCCAACAAGAGTAAGCTACTCAGCTATTTGGATTTGAACTGTGCCGGCGagaatggaggaggaggaggtcaCCACCAGAACCAGtcacaccagcagcagcagcagccgcagcaccATCATTCGGAGAATGAGATTGATTTGGAGAAGCCATCGGCCGCCCAAATATTGGACGGCATACCGTCGCTGAAGAAACGCAAATCTTTAACAGTCTATCCACTGCCCGCTATTCCCATCAAGGATGAGCCCATTGACACAGATGATGACTATCAAATGAAATCGCTGGACGAATCCGACGACATGGTCGATCCCACAATGTTCCTAGAACGCTCCGAGCACGAGGGCGATATACCATTAATGACCTCCGACTATGATTATACGGCGCAGCATGGTGTAAACGCAGAGACAGCGGCCGCCTCTCTGCCGCCAAATGCCGTGGCAAATGTGGCCGCTGCCGGGGACTCAAAGGTGGCCAGCTGCAGGGCATGCAGCCTTCAGTTTTCGACACGTGCCAATGCCCGTCGCCATGAGCGAAATTTGCACCCAAATCTGTTCCAACTGTCGACGGACTCGCCCAACAATACGCCAATCACAAAGCCCACACCGGCACTGGCGGCTGCATTGGAGATTCAGCGTGCCGCCGCCGAGGCGGCCACCGAGGAGGCCAGCAAAGCTGCGGGCGCTGCCGGGGGTAATATATCGACCCAAAAGTATCGTCAGGTGGTGATGAACGCCTTCATCAAGTGCGAGGGTGGGGGCTTTAACTATGATAATCCCGAGCAATACCAGCCGCTGCTCACCCGCGACAAGGTGGAGTTTATCGAGCAGAATTACGAATTCCTGGAGCAGTACCAGACGATGACATGCCGCTGCTGCGACAAATACTTTAGTACGTACAAGAACTTTATGGCGCATGTGCGTAAAAAGTATCCGCTGTTGCCGCGCAATCTCTGCTTCAACTGCCTCAAGATGAACGAATCGAAGGCTCTGTTCATTTCGCATCTCAAGAAGCGCAACTGCATCAATCTGTTTCGTGTGCTGAACGCCCTGCGCGGCAAGCAGCCAAATTTCCATCCCTCATCGGACATTGGATCATCATCGTTTGGTGGAGAGACCACCATCACCCCCACCATCACCAGTCCCAATGTCGTTGTACCGCTGCTGTTAGATAACAGCTCAAGCGGCGAACGGCCAGAGAAGCTGCGCGCCAAGGAGCTGCTGGTGAATAAGCTTTACGAGTGTAAACTCTGCCCAAAGGGCTTCCGCACCAAGCACGAGTTTCGCACCCATGTGTACGACAAGCATGCGGACGTGCAGCGCAAGGACAACAATTCGATTCAGTGCAGCTTCTGTGGTCTGGACTTTGCCGATCCAGTGGACAGGCGCCGCCACTACAACAATATGGACTGCATTGTTCGCCTCCGGTGCATGACATGTGATGCCAAGGTGGAGACACATCAGCGTTTCCTCGATCATGTCTATCAGGATCATCTTGGGGGCATAAGCAGCGAGAATGCCTCTACTGTGAGTGGAATGGGCGGCGCCGGCGGtggcaggagcaacagcagtatTGAGAACTCGCCTGGGAAGCGGAGTCTACTAGGTGCTCTCGGGATTGGGGTTGGCTCCCCCGCCGATGAGTCACGAAGTGGCGGCagtgcagcggcagctgcagcaccCAATCAAACCTCTACGCCAAAGCCAACATCGGGTGGTGGAGCGGCGGGCACGACATCTGGCTCTCTAAATCGTGATGCTGGTGGTGCGCCGAAATCGCAGTATTTCTCACGAATGCCACAGGTTTGCCCCATCTGTGGCCAACAGTACAACAACTACAATAACGTGCTGCGTCACATGGAATCGAAGCATCCGAACAAACTCCCGGAGACATACAAGTGTGTGCGATGCGGCCTGGGATATCCGAGGATCTCGTATCTCCGAGAGCATATGATCAACGTTCATGGCGTGGACAAGAATCGTCATTCGGGCGGCTTTGAGTACATTGTGAATGCGGATGCCGTGAAGCTGGCCGACGGCAGTACACCGAATGTATCCACGGGTCGTTACGACTATGTGATGAAGGATCTGATGTCAATAACAAATGGTGGGACACTCGATGATGACGAGGAGGAGACCGGCAGCGTGGCCAAGAAGATACGTCTGGACGatagcagcaacaacagcagtctGGTGGGCGGCGTGGCCAGCCAGCAAAAAGAATGCCCCATCTGCAACGCACTGTTCAGCAACAATATCGGCTTGTCAAATCACATGCGCTCGCATTACACGGCCTCGAGTACCGTGAATGCTGCTCTGGTGGCGGCCAATCGTATGACACCCAAATCCTTGACCATAACCGCCACCCCAGCCACAGAGACGGTCACATCATCGACCCCGGTGGATGTCGACGATGATGAGGGCATTATAACGCTCGAAACGGGAAATATTATGGCCAGCATCAGTGGTGGTAGAGGTgtcgcttctgctgctgctgctgctggtactgGTGCTGTTGCCGTCCCTCCTGCCATGGTTAATCAGACGCCCCAAGAGCAGGCAGTCTTTCGTCGTAGTCTGGATCAGGCGGCGGATCGTCGGTTCCGCCGGATGCGTTGCCGCATCTGTCAGCGGCGTTTTAGCTCAAAGAAATCATACCGCTATCACATGCTCACCGACCATCAGGTGCAGAATGTGCAGTTTATCAAATGCAAGCTGTGCAATGCAGAGTTTGCCTACGAGAAGGGTCTGAAGGTGCATCTGTTCAAGGTGCACGGCCGGGCCATCAAGGATGAGATGATTGTGAAGCAGTTTGAGTGCGATGTCTGTTCGATTGTGTACAGCTCAGAGCTGGAACTGAAGCAGCACAAGAAGAGTGTCCACAAGCTGGCATCCGTGTCGGTGTCTGCATCCGCCTCGGCATCGgcttctgcctctgcatcCACATCCTCGAAAATCGATGATGATTCACTGATGATAGAGGATATCGGTGGCAATAGAAGCAGTCATCAGCATCACAGCAAGGCATCTGGTGATCTGGCCGATCAGTCCAACATCtctgctgccaccgccactgccacaacGACGCCGTTGTACTGGTACCAGTGCAAGTACTGTCCCTCCAACTTTAACACAAACAAGAAGCTGGCCATCCACATTAACTCGCACGATGAGTTCGACTCGAATGATTACTCGTGCAAGGACTGCGGCAATGTCTATAGCGGTCGCAAGAGTCTATGGGTTCATCGCTACAAAAAGCATCCGCAGGTGCCCGACCCTATCGAGTGCACGCTGTGCCGCAAGGTATTCTTTGACCATCAGATGCTGGACAACCATACGCCAACCTGCAACCGAAAGCCGATTACCGCCACGGGGGCGCATCAGCAGGAGCTGCAGACAAATCCGGCGCTGGGTCGGCCCGTATTCAGGCACAAGACTGGCGACGATGATGACGAGGAagagcaacatcagcagcagcttaATCCACAGGAGGATGCTGGCGATGGAGGAGCAGTAGCGGTAGCCACATCGAGTGGTGGCACCATTAGTGCGGGCAGTAACAAAAAGTTGCGCTTACTGGATGTGGCCTGTACAATTTGTGGTGCCCGATTCACCGATCAGGAGCACTTTACCAAGCACTTACAGAAGCATGAGCAGGATCTGTATGTGGATAATCCGCTGGCAGCGATGTTCGACGATGGGCCAGCGGATGTGGCCCAATTTAAGGTGGAGGGCCAGAACGAGAATGGGGAATATGCGTGCGATATGTGTACGAAGACATTCCCCCAAGTGATTGCACTCAAAGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAACCACATCGACAGCGAAACGACGAatatcaacaacaacaacaattcgGTGAACAACTCCACATCGATGCTACGGGAGCTGCATGCAGTGGGTCTGATGCCCAACcaacaacagaagcaacagcagagcCAACAGCAGAGCCAACAGCAGAGCAACTCCACGTCCACgccgaacaacaacaacagcagcagcaacaacaacaacagcagcagcagcagcaagagcaaaTCAATGAAGCGTAAACGTGAATTAAAATGCGAATACTGCCCCTCGACATtcatcagcaacaacaacctgCGACGACACATGTATGAACTGCATAAGCACGAGGTGAGTAGCCTGCCAGCACCACCCGTGATTGTGGTAGATGACCCGCTAAGCTGCCGACGTTGTGGCGATATCAAATTCGCGACGAAAGAACTGTGGATCGAGCACAAGCTGGCCGATGCGAAGGTGGTGCGACCATTTTGTCCCTTCCAATGGGGCTGTGACATGTGTGGCGAGTACTTGTCGCGCAAGGAGAAGCTCATGAATCACATCAATAATCATTTGAAGGAGGATGTTATTGTGCCAGTGTCCACACAAGCGGCCATCGATAGAGAACAACGAGCATCGAcagaatcatcatcatcagcctCCGAGGCAACAACATCCAAAGCGAAGGCGTCATCCGCCTTGCCGGCTTCAACCAGCGCAGCATTGCAGAAAAAAACTGAGGAAAATGGTGGACTGGAGACAGCAGAGGCGGCGGTAAAGGCAGAGGAGGATGATAGCGAAATGGAGGATGGCGACAGTTCAGACGCTGATGAAGAAAGCTCTGGCACAGgggatgacgacgacgatgacggcgacgacgacgacgacgatgatgatgaagatgaagacgaTGACGAAGATGAgggcgaggacgaggaggGTGTGCCCCCACCAACACCTGCCACACAActgttgcaacagcaacacaaatCCAATATTGACAAGGATGAAGATCTCGTCGAAGAAGTGATGAGCTCTGATGAGGAGGCGGAGGAAGGCGAAAGCCAAAGCGATGAGGACGATGACGAAGATGACGATGAagacgacgatgacgaggaggaagaggaacaGGGACAGGAACAGGGTTCACAGCCCCTGATGAATGGCAAGTCGAAAGAGCATCAACAGCAAATCGAAGAGATATTGCCCAGctccgacgacgacgaagaggAGCAGGATGGCAATTTAGATGGCCATTTGATGGCCATTGAAGACATTATTGAAGAAGAATATGATGAAGACGATGATGTGGAGGAGGTAGACGATGGTGCAGTCCATCCAGATCCCGACGATGTTATCGAAGAGGTCGACGACGATGATGCGGATGAAGTGGATGATGAGCAGAATGTCGATGGGGGGGCCACATCGTCGGCCTCATCGTCAGAGAGCGAATCAACATCCACGACCACATCCAATTCGCATTCAACTGGTGAGCGGCGAAAGAAGGCTGGCGACCAGTCGTCAAAACCCAGCTTTACCTGTGATCTATGTCAACTTTGTTTCGATTCCCAGGAGCTTCTCCAGTCTCACATCAAAAGCCATTTCCTCAATGGTCCAAAAATCTCTACCTCACAAGCAGCAAGCAacgcaacagcaacggcaacgccgacggcgacagcgacggcgacgactGTGTCCAGCAATTGTAACAACAATGCGTCGACCAAATCCACGAAGCTCTCtccagcagctggagcagcCAACCACAACCGTCAAAGAAGTGCCGTCGTCGCCGCAGAAATGGGGGCCAGCggtagcagcagcggcagcagcaattgA
Protein Sequence
MCDTATTATAVATTVGASLVSVTGTSQGTAVATATAAGATPPATTTAKPEQQRARQNCCRLCIAPATECISIINSYAADKEPLSTKIHNCVNIKITPQDRLSLQICHACISYLNSWQSFKNRSVSAQSKQRQWLEANKSKLLSYLDLNCAGENGGGGGHHQNQSHQQQQQPQHHHSENEIDLEKPSAAQILDGIPSLKKRKSLTVYPLPAIPIKDEPIDTDDDYQMKSLDESDDMVDPTMFLERSEHEGDIPLMTSDYDYTAQHGVNAETAAASLPPNAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAEAATEEASKAAGAAGGNISTQKYRQVVMNAFIKCEGGGFNYDNPEQYQPLLTRDKVEFIEQNYEFLEQYQTMTCRCCDKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNESKALFISHLKKRNCINLFRVLNALRGKQPNFHPSSDIGSSSFGGETTITPTITSPNVVVPLLLDNSSSGERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKVETHQRFLDHVYQDHLGGISSENASTVSGMGGAGGGRSNSSIENSPGKRSLLGALGIGVGSPADESRSGGSAAAAAAPNQTSTPKPTSGGGAAGTTSGSLNRDAGGAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVSTGRYDYVMKDLMSITNGGTLDDDEEETGSVAKKIRLDDSSNNSSLVGGVASQQKECPICNALFSNNIGLSNHMRSHYTASSTVNAALVAANRMTPKSLTITATPATETVTSSTPVDVDDDEGIITLETGNIMASISGGRGVASAAAAAGTGAVAVPPAMVNQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDVCSIVYSSELELKQHKKSVHKLASVSVSASASASASASASTSSKIDDDSLMIEDIGGNRSSHQHHSKASGDLADQSNISAATATATTTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPIECTLCRKVFFDHQMLDNHTPTCNRKPITATGAHQQELQTNPALGRPVFRHKTGDDDDEEEQHQQQLNPQEDAGDGGAVAVATSSGGTISAGSNKKLRLLDVACTICGARFTDQEHFTKHLQKHEQDLYVDNPLAAMFDDGPADVAQFKVEGQNENGEYACDMCTKTFPQVIALKVHRKWHFRGDSKQNHIDSETTNINNNNNSVNNSTSMLRELHAVGLMPNQQQKQQQSQQQSQQQSNSTSTPNNNNSSSNNNNSSSSSKSKSMKRKRELKCEYCPSTFISNNNLRRHMYELHKHEVSSLPAPPVIVVDDPLSCRRCGDIKFATKELWIEHKLADAKVVRPFCPFQWGCDMCGEYLSRKEKLMNHINNHLKEDVIVPVSTQAAIDREQRASTESSSSASEATTSKAKASSALPASTSAALQKKTEENGGLETAEAAVKAEEDDSEMEDGDSSDADEESSGTGDDDDDDGDDDDDDDDEDEDDDEDEGEDEEGVPPPTPATQLLQQQHKSNIDKDEDLVEEVMSSDEEAEEGESQSDEDDDEDDDEDDDDEEEEEQGQEQGSQPLMNGKSKEHQQQIEEILPSSDDDEEEQDGNLDGHLMAIEDIIEEEYDEDDDVEEVDDGAVHPDPDDVIEEVDDDDADEVDDEQNVDGGATSSASSSESESTSTTTSNSHSTGERRKKAGDQSSKPSFTCDLCQLCFDSQELLQSHIKSHFLNGPKISTSQAASNATATATPTATATATTVSSNCNNNASTKSTKLSPAAGAANHNRQRSAVVAAEMGASGSSSGSSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-