Basic Information

Gene Symbol
hang
Assembly
GCA_900245975.1
Location
NW:61666-80775[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.26 15 5.8 1.0 3 23 298 319 297 319 0.93
2 18 0.59 35 4.7 2.7 3 22 427 446 425 446 0.89
3 18 0.00056 0.033 14.2 3.3 1 22 548 569 548 571 0.90
4 18 0.064 3.8 7.7 0.1 2 21 583 602 582 603 0.93
5 18 0.00065 0.038 14.0 0.2 2 23 740 762 739 762 0.95
6 18 0.0019 0.11 12.6 0.1 1 23 770 793 770 793 0.96
7 18 0.00024 0.014 15.4 0.2 2 23 879 900 878 900 0.97
8 18 0.00027 0.016 15.2 2.9 2 23 1011 1033 1010 1033 0.97
9 18 0.021 1.2 9.3 0.2 2 23 1042 1064 1041 1064 0.95
10 18 0.0041 0.24 11.5 0.2 1 23 1077 1100 1077 1100 0.97
11 18 0.00012 0.0069 16.3 1.1 1 23 1180 1202 1180 1202 0.99
12 18 0.0018 0.11 12.6 0.9 1 23 1210 1233 1210 1233 0.96
13 18 0.32 19 5.5 0.5 2 19 1241 1258 1240 1259 0.92
14 18 3e-05 0.0018 18.2 1.4 3 23 1346 1366 1345 1366 0.98
15 18 0.00099 0.058 13.4 0.5 1 23 1401 1423 1401 1423 0.97
16 18 5.7e-05 0.0034 17.3 0.6 2 23 1513 1535 1512 1535 0.93
17 18 0.0041 0.24 11.5 0.5 3 23 1591 1611 1591 1611 0.98
18 18 9.5e-05 0.0056 16.6 2.1 1 23 1955 1977 1955 1977 0.98

Sequence Information

Coding Sequence
ATGTGCGACacggcggcaacaacaactacaacagtTGTGGCAACTACAACGGTGGCTGCAGCGTCGTCGGTGTCTGGCCCTGGAACAAGCCAGAGTCAGGGAACGGCAGCGGCTACATCAGCGACTGCAGGAGCCACACCGCCAGCTACAACCACAGCGAAAcccgagcagcaacagcgggcGCGACAAAACTGCTGCCGCCTCTGCATTGCCCCGGCCTCGGAATGCATTTCGATCATCAATAGCTATGCGGCCGACAAGGAGCCGCTCTCTACAAAAATCCACAACTGTGTGAACATCAAGATAACACCTCAAGATCGGCTGTCACTGCAGATCTGTCACGCCTGCATCAGCTACTTAAACTCGTGGCAGAGCTTTAAGAATCGCTCGGTGAGCGCACAGACCAAACAGCGTCAGTGGCTGGAGGCCAACAAGAGCAAGCTGCTCAGCTATTTGGATTTGAACAGTGCCGAGAATGGAGGAGGtcatcagcagcaccaacagaaccagtcacagcagcagcatcagcagcatcattcGGAGAATGACATCGATTTGGAGAAGCCATCGGCAGCTCAAATATTGGACGGCATACCATCGCTGAAGAAACGAAAATCCCTAACAGTCTATCCACTGCCCGCTATACCCATCAAGGATGAGCCCATTGACACCGATGATGACTATCAAATGAAATCGTTGGACGAATCCGAAGACATGGTCGATCCCACAATGTTCCTAGAACGCTCCGAGCACGAGGGCGATATACCACTAATGACCTCCGACTATGATTATACGGCGCAGCATGGTGTGAATGCAGAGACAGCGGCCGCCTCGTTGCCGCCTAATGCTGTGGCTAATGTGGCCGCCGCCGGGGACTCGAAGGTGGCCAGCTGCCGGGCATGTAGTCTTCAGTTTTCGACACGTGCCAATGCCCGTCGCCATGAGCGGAATTTGCACCCAAATCTGTTCCAATTGTCGACAGACTCGCCCAACAATACGCCCATCACAAAGCCCACCCCGGCACTGGCGGCAGCACTGGAGATACAGCGTGCCGCCGCCGAGGCGGCCACCGAGGAGGCCAGCAAGGCTGCCGGCGCTGCCGGTGGCAATATATCGACCCAAAAATATCGCCAGGTGGTTATGAATGCCTTCATCAAGTGCGAGGGCGGTGGCTTCAACTACGACAGTCCCGAGCAATATCAGCCGCTGCTCACCCGCGACAAGGTGGAGTTTATCGAGCAGAATTACGAATTCCTCGAGCAGTACCAGACGATgacatgccgctgctgcgaaAAATACTTTACTACGTACAAGAACTTTATGGCGCATGTGCGTAAGAAGTATCCGCTGTTGCCGCGTAATCTCTGCTTCAACTGCCTCAAGATGAACGAATCGAAGGCGCTCTTCATATCGCATCTCAAGAAGCGCAACTGCATCAATCTGTATCGTGTGCTGAACGCACTGCGCGGCAAGCAGCCCAATTTCCATCCCTCAACGTCTGACATGGGATCGTTTGGTGGCGAGACGAGCAACGCAGCGATTACCAGTCCCACTGTCGTGGTGCCACTGCTGATGGATAACAGCTCGAGCGGCGAGAGGCCAGAGAAGCTGCGcgccaaggagctgctggtgaATAAGCTTTACGAGTGCAAGCTCTGCCCGAAGGGTTTCCGCACCAAGCACGAGTTCCGCACTCATGTGTACGACAAGCATGCGGACGTGCAGCGCAAGGACAACAATTCGATTCAGTGCAGCTTCTGTGGCCTGGACTTTGCAGATCCCGTGGACAGGCGACGGCACTACAACAACATGGACTGCATTGTCCGGCTGCGCTGCATGACGTGCGATGCGAAAGTGGAGACGCATCAGCGTTTCCTCGATCATGTCTATCAGGATCATTTGGGTGGCATCAGCAGCGACAATGCCTCCACGGCGAGCGGATTggtcggcagcagcagcagcattgaaaACTCACCTGGCAAGCGGAGTCTATTGGGTGCCCTTGGTATTGGTGTTTGCTCTCCCGCCGATGAGTCACGCAGCGGCAgtgcagcagcgggagcaggagGATCAGCAGGGGCAGCACCCAATCAAACCTCAACGCCAAAGCCAACATCGGGAGGTGGTGGAGTCGCGTGCACAACAcctggcggcagcggcggctccCTAAATCGTGACAGCGCTCCCAAGTCGCAGTATTTCTCACGCATGCCACAGGTATGCCCCATCTGTGGGCAGCagtacaacaactacaacaacgtGCTGCGGCACATGGAATCGAAGCATCCAAACAAACTGCCCGAAACATACAAATGCGTACGCTGCGGCCTGGGCTATCCACGAATCTCGTATCTCCGCGAGCACATGATCAATGTGCATGGCGTGGACAAGAATCGTCATTCCGGTGGCTTTGAGTATATTGTGAATGCGGATGCCGTCAAGCTGGCCGATGGCAGTACACCGAACGTGTCCACGGGTCGCTACGACTACGTGATGAAGGATCTGATGTCAATAACAAATGGTGGGACACTCGatgacgacgaggaggagactgGCAGCGTGGCCAAGAAGATACGCCTGGATGATAGCAGCAATAACAGCAGCCTGGTGGGTGGCGTGGCCAGCCAGCAAAAGGAATGCCCCATCTGCAATGCGCTTTTTAGCAACAATATTGGCCTGTCCAATCACATGCGCTCCCACTACACGGCCTCGAATTCGGTGAATGCCGCCCTGGTGGCTGCCAATCGCATGACACCCAAGTCGCTGACGATAACCGCCACACCAGCCACAGAGACGGTCACCTCAGCGACAGCCTCACTCGATGTGGAGGATGATGAGGCTCTTATAGCGCTTGAAAAGGCAAAGATAATGGCCAGCGTGAACGCTGCCAGAGCGGCTAGAGTTGCTAGTGCTGCTTCTGGGGCTTCTGCATCTTCTGTGCCGCCTGCCATGGCCAATCAGACGCCCCAGGAGCAGGCTGTCTTTCGTCGCAGCTTGGATCAGGCGGCGGATCGTCGCTTCCGACGCATGCGCTGCCGCATTTGTCAGCGGCGTTTTAGCTCCAAGAAATCGTATCGCTATCACATGCTCACCGACCATCAGGTGCAGAATGTGCAGTTCATCAAATGCAAGCTGTGCAATGCAGAGTTCGCCTACGAAAAGGGCCTGAAGGTGCATCTGTTCAAGGTGCATGGCCGTGCGATCAAGGACGAGATGATTGTGAAGCAGTTCGAGTGCGATGTCTGCTCGATTGTGTACAGctcggagctggagctgaagcagcaCAAGAAGAGTGTCCATAAGTTCACATCATCCGTGTCGGTGTCGGCATCCGCCTCGGCatcggcctctgtctctgcctctgcgtcaACATCCTCGAAAATGGATGACGATTCAATGATGCTGGAGGATATGGGTGGCAATAGAAGCCGCCACCATCAACAtcagcaccacagcagcaagGCGTCTGCCGATTCGGTCGATCAGTCCATAATTTCTGGtgcggctgccacagccacaacgacGCCGCTGTATTGGTACCAATGCAAATACTGTCCCTCTAACTTTAACACAAACAAGAAGCTGGCCATCCACATTAACTCGCACGACGAGTTCGATTCGAATGATTATTCGTGCAAGGACTGCGGCAATGTCTACAGCGGCCGCAAGAGTCTTTGGGTTCATCGCTACAAAAAGCATCCGCAGGTGCCCGATCCCATTGAGTGCACGCTGTGCCGCAAGGTGTTCTTCGATCATCAGATGCTGGACAATCATACGCCAACCTGCAACCGCAAGCCGATTACCGCCACTGGGGCGcatcagcaggagctgctgacGCAGGCAAATCAATCGCAGGGTCGTGCCGTATTCCGACACAAGACTggggacgatgatgatgaggaagacatgcagcagcatcaccaacagcaacaggatgCAGGCGATGCAGTGGCAACAGtgacagcagcaactgctgcagcggcagccacatcGAGTGGTGGCAGTAGCAAAAAGATGCGCATACCGGAGGTGGCATGCACCATTTGTGGTGCACGCTTCACCGATCAGGAGCACTTTAGCAAGCACATACAGAAGCATGAGCAGGATCTGTATGTGGATAACCCATTGGCGGCAATGTTCGATGATGGGCCAGCGGATGCGGCACAGTTAAAGATCGAGGGCCAGAACGAGAACGGGGAATATGCGTGCGATATGTGCACGAAGACATTCCCCCAGGTGATTGCACTCAAAGTGCATCACAAGTGGCATTTCAGAGGTGATAGCAAGCAGAACCACATCGACAGCGAAACGACGaatatcaacaacaacaacaacaattcggTGAACAACTCCACATCGATGCTACGGGAGCTGCATGCAGTGGGTCTGACGCccaatcaacagcagcagcagcagcatcagagcCAACAGCAGAATTCCACGTCCACgccgaacaacaacaacaggagcagcagcaacaacaacaacaacagcagcagcaccaagaGCAAATCGATGAAACGTAAACGTGAATTGAAATGCGAATACTGCCCATCGACCTTCATCAGTAACAACAACCTGCGACGACATATGTATGAGCTGCACAAGCATGAGGTGAGTAGCCTGCCAGCACCGCCAGTGATTGTGGTAGATGAGCCGCTCAGCTGCCGACGCTGTGGCGACATTCAATTCGAGACAAAAGAACTGTGGATCGAGCATAAGCTGGCCGATGCGAAGGTGGTTCGACCCTTTTGTCCCTTCCAATGGGGCTGTGACATGTGCGGCGAGTACTTGTCGCGCAAAGAGAAGCTCATGAATCACATCAATAATCATTTGAAGGAGGATGTCATTGTGCCAGTGGCCACACAAGCGGCCATTGACAGAGAACGTGCAGCATCCTCATCAGAGGCAACAACATCCAAAGCAACATCAGCATCCGTGTTGGTTGAGCAGAAGCCAACCGGCACAGCGTTGCAAAAGAAAACGGAAGAGAATGGTGGACTGGATGCAGCGGTGGCGACAGCGGCAGAGTCGGTGAAGGCAGGCGAAGATGATAGCGAAATGGAGGATGTCGACAGTTCAGACGCTGATGAAGAAAGCTCTGGCACAGGGGATGAGgaagacgacgatgatgatgatggcggaGAGGACGATgaagatgacgatgatgaagaAGATGAGCTgcaggacgacgacgacgatgatgatgaagaagaAGAGGGTGAGGGTGAAGATGAAGAAGGGGTCCCCCCACCAACACCTGCCGCACAATTGTTGCAACacaaacagccacaacaacaacaacaacaacacaaagcCAATAACAATAGTATTGACAATGTTGATGATCTCGTTGAGGAAGTGAACAGCTCTGATGATGAGGAAGCCGATGTCGAAGTAGGGAGCGAAAGTCAAACCCAAAGCGATgaagacgatgacgatgaagaAGATGATGAAGCTGACATTagtgaggaggaggagggtgaGGAGCTGGGCTCGGCACAGCCCCTGACTAATGGCAAGTCGAATGAGCATAATGCGACGCCCCAACAGCAAATGGAGCAAATTTTGCCCAGCTCTGACGAGGAAggcgagaacgagaacgacaacgacaacgacaacgtaGAGGAAGATGGTGGCAATGCAGATGGTCATACATTGGCCATTGAGGACATTATTGAAGAAGAATATGATGAAGACGATGATATGGAGGAGGTATACGATGATCAGAATGCTGATGGTGGTGCCACATCGTCGGTATCATCCTCAGAGAGCGAATCAACATCCTCGACCACATCCAATTCGCATTCAACTGGTGAGCGGCGTAAGAAGGCTGGCGGCGATGAGTCGTCAAATCCCAGCTTTACCTGTGATCTATGTCAACTTTGTTTCGATTCCCAGGAGCTTCTGCAGTCTCACATCAAAAGTCATTTTCGCAATGCCCCAAAAATCTCAGCCAAATCAACCGCAACGGCCACGGTAACGACGGTGGCATCGGCGACGACTGTTCCCAGTAGTTGTAACAACAATGCCTCGACCAAATCCTCCTTAAAGCACTCTCCCGCAGCGgccagcggtggcagcagtaGCAATTGA
Protein Sequence
MCDTAATTTTTVVATTTVAAASSVSGPGTSQSQGTAAATSATAGATPPATTTAKPEQQQRARQNCCRLCIAPASECISIINSYAADKEPLSTKIHNCVNIKITPQDRLSLQICHACISYLNSWQSFKNRSVSAQTKQRQWLEANKSKLLSYLDLNSAENGGGHQQHQQNQSQQQHQQHHSENDIDLEKPSAAQILDGIPSLKKRKSLTVYPLPAIPIKDEPIDTDDDYQMKSLDESEDMVDPTMFLERSEHEGDIPLMTSDYDYTAQHGVNAETAAASLPPNAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAEAATEEASKAAGAAGGNISTQKYRQVVMNAFIKCEGGGFNYDSPEQYQPLLTRDKVEFIEQNYEFLEQYQTMTCRCCEKYFTTYKNFMAHVRKKYPLLPRNLCFNCLKMNESKALFISHLKKRNCINLYRVLNALRGKQPNFHPSTSDMGSFGGETSNAAITSPTVVVPLLMDNSSSGERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKVETHQRFLDHVYQDHLGGISSDNASTASGLVGSSSSIENSPGKRSLLGALGIGVCSPADESRSGSAAAGAGGSAGAAPNQTSTPKPTSGGGGVACTTPGGSGGSLNRDSAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVSTGRYDYVMKDLMSITNGGTLDDDEEETGSVAKKIRLDDSSNNSSLVGGVASQQKECPICNALFSNNIGLSNHMRSHYTASNSVNAALVAANRMTPKSLTITATPATETVTSATASLDVEDDEALIALEKAKIMASVNAARAARVASAASGASASSVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDVCSIVYSSELELKQHKKSVHKFTSSVSVSASASASASVSASASTSSKMDDDSMMLEDMGGNRSRHHQHQHHSSKASADSVDQSIISGAAATATTTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPIECTLCRKVFFDHQMLDNHTPTCNRKPITATGAHQQELLTQANQSQGRAVFRHKTGDDDDEEDMQQHHQQQQDAGDAVATVTAATAAAAATSSGGSSKKMRIPEVACTICGARFTDQEHFSKHIQKHEQDLYVDNPLAAMFDDGPADAAQLKIEGQNENGEYACDMCTKTFPQVIALKVHHKWHFRGDSKQNHIDSETTNINNNNNNSVNNSTSMLRELHAVGLTPNQQQQQQHQSQQQNSTSTPNNNNRSSSNNNNNSSSTKSKSMKRKRELKCEYCPSTFISNNNLRRHMYELHKHEVSSLPAPPVIVVDEPLSCRRCGDIQFETKELWIEHKLADAKVVRPFCPFQWGCDMCGEYLSRKEKLMNHINNHLKEDVIVPVATQAAIDRERAASSSEATTSKATSASVLVEQKPTGTALQKKTEENGGLDAAVATAAESVKAGEDDSEMEDVDSSDADEESSGTGDEEDDDDDDGGEDDEDDDDEEDELQDDDDDDDEEEEGEGEDEEGVPPPTPAAQLLQHKQPQQQQQQHKANNNSIDNVDDLVEEVNSSDDEEADVEVGSESQTQSDEDDDDEEDDEADISEEEEGEELGSAQPLTNGKSNEHNATPQQQMEQILPSSDEEGENENDNDNDNVEEDGGNADGHTLAIEDIIEEEYDEDDDMEEVYDDQNADGGATSSVSSSESESTSSTTSNSHSTGERRKKAGGDESSNPSFTCDLCQLCFDSQELLQSHIKSHFRNAPKISAKSTATATVTTVASATTVPSSCNNNASTKSSLKHSPAAASGGSSSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00480993;
90% Identity
iTF_00601200;
80% Identity
-