Basic Information

Gene Symbol
hang
Assembly
GCA_035045905.1
Location
JAWNOO010000076.1:7173011-7186591[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.34 30 5.6 1.0 3 23 610 631 609 631 0.93
2 19 1.1 97 4.0 3.1 3 22 739 758 737 758 0.89
3 19 0.00073 0.065 14.0 3.3 1 22 876 897 876 899 0.90
4 19 7.2 6.4e+02 1.4 0.0 2 21 911 930 910 931 0.91
5 19 0.00084 0.075 13.8 0.2 2 23 1069 1091 1068 1091 0.95
6 19 0.0024 0.22 12.4 0.1 1 23 1099 1122 1099 1122 0.96
7 19 2e-05 0.0017 18.9 0.1 2 23 1210 1231 1209 1231 0.97
8 19 0.00035 0.031 15.0 2.9 2 23 1317 1339 1316 1339 0.97
9 19 0.027 2.4 9.0 0.2 2 23 1348 1370 1347 1370 0.95
10 19 0.00042 0.037 14.8 0.1 1 23 1383 1406 1383 1406 0.97
11 19 0.00015 0.014 16.1 1.1 1 23 1472 1494 1472 1494 0.99
12 19 0.0024 0.21 12.4 0.9 1 23 1502 1525 1502 1525 0.96
13 19 0.69 62 4.6 0.2 2 19 1533 1550 1532 1551 0.93
14 19 3.9e-05 0.0035 18.0 1.4 3 23 1640 1660 1639 1660 0.98
15 19 0.0019 0.17 12.7 0.1 1 23 1695 1717 1695 1717 0.97
16 19 0.00072 0.064 14.0 0.6 2 23 1815 1837 1814 1837 0.93
17 19 0.67 59 4.7 0.1 2 20 1857 1875 1856 1877 0.91
18 19 0.008 0.71 10.7 0.4 3 23 1892 1912 1892 1912 0.98
19 19 0.00012 0.011 16.4 2.1 1 23 2237 2259 2237 2259 0.98

Sequence Information

Coding Sequence
atgtgCGACGCTGCGGCGGCAACGGCTTCGGAGACGGCGACCACAGCGTTGCTGCTGGGTGGAGCCAGTGCAGTGACGGCGCCTGGAGCTGCTGGTGGAGCAACTGCCACCAATACAACCCCAGCCACCACATCCCAGTCAGAAGCCTCTgcttcggcggcggcggcggcggcgacagcAACACCAACcacaacgacgacgatgacggcggcggcggcaacgacGCCGCTGGCGACGAAGAGCGAGCGGGCGGCGCGACAAAACTGCTGTCGCCTGTGCATAGCTCCGGCCAGCGAGTGCATCTCGATCATCAACAGCTATGCGGCGGACAAGGAGCCGCTGTCCACCAAGATCCACAACTGCGTCAGCATCAAGATCACCTCACAGGATCGACTGTCGCTGTATATATGCCACGCCTGCATCAGCTACCTGAACTCGTGGCAGAGCTTCAAGAACCGCTGCCTCAGCTCACAGACAAAGCAGCGCCAGTGGCTggacaccagcagcagcaacaagagCAAGCTCTTCAACTATCTGGACCTGAACAGTGCCGAAAACGGTGGAGCCTCCTCCGATCatcaccagcaccagcagcagcattcccAGCCGCATCATCAGCCGCAATCGGAGAATGAGCTCGACGCGGCGGAGAGGGCGACATCAGCGGCCACAACGGCCGCCAACATATTGGATGGCATACCCTCGCTGAAGAAACGCAAATCCCTAACAGTCTATGTGAGTCCTAAACCGCAGCAGCTGCCACAGCATCAATTGCAGCAGTTGCAGCCACCGGCCAGATTGACGGCGACGGCGACCGGCACCGGCAACGCGCAGCAAACGTTGCAGACCCTTCTCCTGCAGGTGCCAGCCTCAACGGGGAGCTCCTCTTCCACCATTACCACACCCATATCCGTATCCcagcagcgggagcagcagcatcagcgtCAGCAGTCGGCTCAGTATCGCAGAtaccatcaccatcatcatcatcaccagcagcagcagcagcagcagcagcaacagcggaGCAAGCAATTGATGCAACATcatcaccaccagcagcaccaccagcagcagcagcagcaacaccgaCGCCACCGTCAGTTTCGTCCTCAGAGGCCAACTGCTGCCCCGATggcgaatccgaatccgaatccggcTCCATTGTTGCGCAAATACAAGCCCAAAGTGTACTTGCCGTTGGATATAGCAGTGCCACCACTGCCACCGCTGCCATCAGTGGCTGCGGGACCGattgcttctgctcctgcgcCCTCCTCTGCTGCCGTTCCTGCTGCTGAACAGCCGCTGCTAACGGGATTCTCCGGTTTAACTGGAATTGCCGGTGTGGGTGGTGGAATGGAGAGCTTGTCGTTGGCGCTGCCACTTGATTTCAGCCAAAGCTGCAGCAGCGGTCACGTCCAACAGTCGGGTCAGCTGCCCCTGGCCACGGTCACGGCTACAGCTACGGCTACGGCCACGTCCACAGCGACAGCCACTGCCacctctggctctggctctgcaTCTGCATCAGCATCCGTGTCAACGGCTCCGCTGCTCATGCCGCCGCTGCCGGCGTTGCCCATCAAAGATGAGCCCATTGACACGGACGATGACTACCAGATGAAGATGATAGACGAGTCCGACGACATGGTCGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAGGGTGATATGCCATTGATGGCCTCGGACTACGACTATACGGCCCAGCATGGCGTTAATGCCCATTCTCTGGCCGCGGGACTGCCACCGAATGCGGTGGCCAATGTGGCCGCCGCCGGGGATTCGAAGGTGGCCAGCTGCCGTGCCTGCAGCCTGCAGTTCTCCACCCGCGCCAATGCCCGTCGGCATGAACGCAATCTGCACCCGAACCTCTTCCAGCTATCCACGGACTCGCTGCACAATACGTCAGTGACGAAGCCAACGCCAGCCCTGGCCGCCGCATTGGAAATCCAGCGGgcggcagctgcagcggcCACCGCAGAGGCTAACCGTGCTGTGGGCGCTGCCGGCGGTAATATCACCCCCCAGAAATACCGTCAGGTGGTGATGAACGCGTTCATCAAATGCGAGGGCGGCGGCTACGACTATGACAATCCCGAGCAGTACCGGCCACTGCTCACCCACGACAAGGTGGAGTTCATCGAACAGAACGAGGAGTTCCTCGAGCAGTACCAGACGATGacctgccgctgctgcagcaagTACTTCAGCACGTACAAGAACTTCATGGCGCACGTGCGCAAGAAGTATCCGCTGCTGCCGCGCAACCTGTGCTTCAACTGCCTCAAGATGAACGACTCCAAGGCGCTGTTCATCTCACATCTTAAGAAGCGCAACTGCATCAATCTCTACCGAGTTTTGAATACGCTGCGCGGCAAGACACCAGTGCTTTCCGCGGATGTGGATGCGGATATGGCGACGGCGTCGGCAGAAGATGGAGCCACAGCCGCCGTGGCGGTGGCAGATGCCGGTGCAGGCGTTGTCCAAATGGCCAGTCCCGCGGTGACCATTAGCGGCGAGACCGCCGCCGGCACGCCCAGCGGCGGTGAGCGGCCAGAGAAGCTGCGCGCCAAGGAACTGCTGGTGAACAAGCTGTACGAATGCAAGCTCTGCCCCAAGGGCTTCCGCACCAAGCACGAATTCCGCACCCATGTCTACGACAAGCATGCGGATGTGCAGCGAAAGGACAACAACTCGATACAGTGCAGCTTTTGCGGCTTGGATATTGCCGATCCGGTGGACCGGCGTCGCCACTACAACAACATGGACTGCATTGTGCGATTGCGCTGCATGACATGCGATGCCAAGCTGGAGACGCATCAGCGCTTCCTCGATCACGTCTACCAGGATCATTTGGGCGGCGTGGGCGgtggcagtggcggcggcggcggcggggccAGCAGTGATAATGCCTCCACAACGGGCAGCGGCCTGGCCAGAAGCAACAGTATGGAACATTCGCCGGGCAAGAGGAGTCTGCTCGGTGCCCTGGGCATTGGCGTTGGCTCATCGGCGGAAGAGTCGCGCAGCAGCAGTGTGGCGCCAACACTGACGTCCACACCCAAGCCAGCGGGAGGCGCGGCCACAACGGCCTCCTCGGCCTCCGCGCCCAGTTCGGCCAATCGTGGCGATGCGGCCGCACCCAAGTCCCAGTACTTTTCGCGAATGCCGCAGGTGTGTCCCATTTGCGGCCAGCAGTACAATAACTACAACAACGTGCTGCGCCACATGGAATCGAAGCACCCGAACAAGCTGCCCGAAACCTACAAATGCGTGCGCTGCGGCCTGGGCTATCCGCGAATCTCGTATCTGCGGGAGCACATGATCAATGTGCATGGCGTGGACAAGAACCGGCACTCGGGCGGCTTTGAGTACATCGTGAATGCCGATGCCGTGAAGCTGGCGGATGGCAGCACGCCGAATGTGTACACGGGTCGCTACGACTACGTGATGAAGGACCTGATGTCGATAACAAATGGTGGGACCCTCGACGAAGACGATGAGGAGGCGCCTGGCAGCGTGGCCAAGAAGATCCGGCTGGACGatagcagcaacaacagcagcttGGCGGGTGtcgccagcagccagcagcaaaaGGAGTGCCCCATTTGCAATGCCGTGTTCAGCAACAACATTGGCCTCTCCAATCACATGCGCTCCCATTATACAGCCGCCAGTGTGGTGACCGCAGCTCTGGCGGCCGCCAATCGCATGACACCCAAATCGTTGACCATAACGGCAACACCAGCGGCCGCAGATGCAGGGCCGGAGGCAGCGGCATACACAGCATCGGCAACGGCAAtggccggcagcagcagcaatgttGTGCCACCGGCGATGGCCAATCAAACGCCCCAGGAGCAGGCCGTATTCCGGCGGAGTTTGGATCAGGCGGCCGACCGTCGCTTCCGGCGAATGCGTTGCCGGATTTGCCAGCGGCGCTTCAGCTCGAAGAAGTCCTATCGCTACCACATGCTGACGGACCATCAGGTGCAGAATGTGCAGTTCATCAAGTGCAAGCTGTGCAACGCGGAGTTTGCCTACGAGAAGGGTCTGAAGGTGCATCTGTTCAAGGTGCACGGTCGGGCCATCAAGGACGAGATGATTATCAAGCAGTTTGAGTGCGAGGTCTGCTCCATTGTGTACAGCTCGGAGgcggagctgcagcagcacaagCGCAGTGTCCACAAGCTGACCTCGGCATCGGCATCTGCTTCGGCCTCTACCTCGGCATCGGCGTCTGCCTCCACCTCCTCGAAAATGGAGGACGATGTGTTGATGGATGACGAAGGCAAGCCAGCAGCCGGTGGCGGCGATCAGGCCGATCTGTCCACTCTTTCGGCCAATGCGTCGGGACTGGGAGTGGGTATGCCGCTGTACTGGTACCAGTGCAAGTACTGCCCCTCGAACTTCAACACCAACAAGAAGCTGGCCATTCACATAAACTCGCACGACGAGTTTGACTCGAATGACTATTCCTGCAAGGACTGCGGCAACGTCTACAGCGGACGCAAGAGTCTATGGGTTCACCGCTACAAGAAGCATCCACAGGTGCCAGATCCGGTCGAGTGCTCGCTGTGCCGCAAGATTTTCTTCGATCGCCAGATGCTGGACAACCATACGCCCACCTGCAACCGCAAGCCAATCACCTCAACGGGTGCCCATCAGCAGCAGGAttcgctgcagcagcagcagcaggcggcacAGCAGCGCGCTGTTTTCAGGCACAAGACGGGtgacgacgatgacgaggagGATGATGGACAGCAGCAGCTAGAGGAGGGCGACAGCAATGGAGGGCCAACAGCTTCGGCATCGGGAAGCGTTGCTGTGGCAGTGGCGGCTTCTGCCCAGGCGGCGCTGAAGATCCGCATACCGGAGGTGGCCTGCACCATTTGCGGGGCCCGGTTCACCGACCAGGAGCACTTTAGCAAGCACATCCAGAAGCACGAACAGGAGCTGTATGTGGACGATCCGCTGGCGGCGATGTTTGACGATGGGCCGGCGGATGCCGGTCAGTTCCAGGTTGAGCGGCAGAACGAGAATGGGGAATACGCGTGCGATTTGTGCGCCAAGACGTTCACCCAGGTGATTGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAACCCCATCGACGGCGAAGCGACACAGTTGACCAACAACAATCATActaccagcaacaacaacaacaacaacaacaacagcagcagcaacaactcgATGCTGCACCTCCGCGAGCTGCATGCGGTGGGCCTGATGCCcaaccaacagcagcagcagcaacagcagcagcagcagagccacAACAGCCACtcgagcagcaacaacaacaacagcatgAACCACAgcggaggcagcagcagcagcaagtcgATGAAGCGGAAGCGTGAGCTGAAATGCGAATACTGCGCCTCCACCTtcatcagcaacaacaatcTGCGCCGGCACATGTACGAGCTGCACAAGCACGAGGTAAGCAATCTCCCGGAGCCGCCGGTCATCTTGGTGGACGATCATCTCCAGTGCCGTCGCTGTCAGCTCAGTTTCGAGACAAAGGAGCTGTGGATCGAGCACAAGCTGGCCGATGCGAAGGTGGTGCGTCCGTTTTGTCCCTTTCAGTGGGGCTGCGACCTGTGCGGCGAGTATCTGTCGCGCAAGGAGAAGCTGATGAATCACATTAACAACCATCTCAAGGAGGAGGTCATTGTGCCGGTGGCCACCAAGGCGGCCATTGATCGGGAAGCGGCGGCCACggcagcgacagcagcagctgcaaatGCGACGGATTTAACAgcagatgacgatgatgaagAAGAAGATCCAGATGGGGATGGGGCTAGGGACAACAAAGATAAGACTGCGGCGTCGGCGGCGGTGGTAGCAGGAGCACAAAAAGAAGTAGAAAGCGATGACCTGGACGAGGAGGATAGCTCTGGCGAAGAGGAGGAGAGTTCAGGCACGGGCGACGATGAGGACGATGACTCTGAtgatgacgaggaggaggatgacgaCGGCGATGGAGGCGAAGGTGAAGACGAGGAGGGTGTGCAGCCAGGTCATCTGATGccccaacaacagcagccgcagcagcagcagcagcagcagcacaaccAGGACGACGATGACCTTGTCGAGGAGGTCACCAGCTCGGATGACGAAGATGATGGCGAGGTGGAAAGcaacgatgacgacgacgacgacgacgatgtaGGGgaggatgatgacgatgaggaCGACGATGTGGAGGAACCGGAACCCGTTGCAGTGGCACTGGGGCAATCGCAACCGCTGATGAATGGCAATGGCAAGGCCGAAAAGTCGAAAATGCCGTCGCTGATCATGCGTGGATCCGACGATGAGGACGATGATGACGGTGTTATGCCCATCGATGACATTATCGAAGAGGAATTCGATGAGGACGACGCCATGCCAGATCCAGATGTCGATCCGGATATGGATGATGCCATCGAGGAGGTGGATGACGATGATTTGGATGAGGGGGATGACGTGGagatggaggaggaggtgatATCGGCGGCCTCCTCATCAGAGAACGAGTCCACATCAACGAACACGTCCAATTCGCACGCGCATTCGCATTCACATTCCACGGGTGAGCGGCGTAAGAAGAGGGCTGACGATCAGTTGAATGATCCCAGCTTTACCTGTGATCTATGTCAACTTTGTTTTGATTCCCAGGAGCTACTCCAGAGCCACATCAAAAGCCATTTCCTCAATGGGCCAAAGCTCACAGtggcagccgcagccgcagcagcagcaatgccagTCGCCGCGGCATCATCAAGATCGTCACTAGCAACGGGAAcggcgccgccgccgccaccagcCAAGACGAAGCCTGACTCCAAGTCAGCGCTgctggccaacaacaacaataagagCAGCAAGACTGTTACAGCTGCAGCTGCCACAAACTGA
Protein Sequence
MCDAAAATASETATTALLLGGASAVTAPGAAGGATATNTTPATTSQSEASASAAAAAATATPTTTTTMTAAAATTPLATKSERAARQNCCRLCIAPASECISIINSYAADKEPLSTKIHNCVSIKITSQDRLSLYICHACISYLNSWQSFKNRCLSSQTKQRQWLDTSSSNKSKLFNYLDLNSAENGGASSDHHQHQQQHSQPHHQPQSENELDAAERATSAATTAANILDGIPSLKKRKSLTVYVSPKPQQLPQHQLQQLQPPARLTATATGTGNAQQTLQTLLLQVPASTGSSSSTITTPISVSQQREQQHQRQQSAQYRRYHHHHHHHQQQQQQQQQQRSKQLMQHHHHQQHHQQQQQQHRRHRQFRPQRPTAAPMANPNPNPAPLLRKYKPKVYLPLDIAVPPLPPLPSVAAGPIASAPAPSSAAVPAAEQPLLTGFSGLTGIAGVGGGMESLSLALPLDFSQSCSSGHVQQSGQLPLATVTATATATATSTATATATSGSGSASASASVSTAPLLMPPLPALPIKDEPIDTDDDYQMKMIDESDDMVDPTMFLERSEHEGDMPLMASDYDYTAQHGVNAHSLAAGLPPNAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSLHNTSVTKPTPALAAALEIQRAAAAAATAEANRAVGAAGGNITPQKYRQVVMNAFIKCEGGGYDYDNPEQYRPLLTHDKVEFIEQNEEFLEQYQTMTCRCCSKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNTLRGKTPVLSADVDADMATASAEDGATAAVAVADAGAGVVQMASPAVTISGETAAGTPSGGERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDIADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVGGGSGGGGGGASSDNASTTGSGLARSNSMEHSPGKRSLLGALGIGVGSSAEESRSSSVAPTLTSTPKPAGGAATTASSASAPSSANRGDAAAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDEDDEEAPGSVAKKIRLDDSSNNSSLAGVASSQQQKECPICNAVFSNNIGLSNHMRSHYTAASVVTAALAAANRMTPKSLTITATPAAADAGPEAAAYTASATAMAGSSSNVVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECEVCSIVYSSEAELQQHKRSVHKLTSASASASASTSASASASTSSKMEDDVLMDDEGKPAAGGGDQADLSTLSANASGLGVGMPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPVECSLCRKIFFDRQMLDNHTPTCNRKPITSTGAHQQQDSLQQQQQAAQQRAVFRHKTGDDDDEEDDGQQQLEEGDSNGGPTASASGSVAVAVAASAQAALKIRIPEVACTICGARFTDQEHFSKHIQKHEQELYVDDPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFTQVIALKVHRKWHFRGDSKQNPIDGEATQLTNNNHTTSNNNNNNNNSSSNNSMLHLRELHAVGLMPNQQQQQQQQQQQSHNSHSSSNNNNSMNHSGGSSSSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVILVDDHLQCRRCQLSFETKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNHLKEEVIVPVATKAAIDREAAATAATAAAANATDLTADDDDEEEDPDGDGARDNKDKTAASAAVVAGAQKEVESDDLDEEDSSGEEEESSGTGDDEDDDSDDDEEEDDDGDGGEGEDEEGVQPGHLMPQQQQPQQQQQQQHNQDDDDLVEEVTSSDDEDDGEVESNDDDDDDDDVGEDDDDEDDDVEEPEPVAVALGQSQPLMNGNGKAEKSKMPSLIMRGSDDEDDDDGVMPIDDIIEEEFDEDDAMPDPDVDPDMDDAIEEVDDDDLDEGDDVEMEEEVISAASSSENESTSTNTSNSHAHSHSHSTGERRKKRADDQLNDPSFTCDLCQLCFDSQELLQSHIKSHFLNGPKLTVAAAAAAAAMPVAAASSRSSLATGTAPPPPPAKTKPDSKSALLANNNNKSSKTVTAAAATN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-