Basic Information

Gene Symbol
hang
Assembly
GCA_008042735.1
Location
VNKB01010923.1:11301-24914[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.3 26 5.6 1.0 3 23 601 622 600 622 0.93
2 19 0.96 83 4.0 3.1 3 22 730 749 728 749 0.89
3 19 0.00064 0.055 14.0 3.3 1 22 866 887 866 889 0.90
4 19 0.074 6.3 7.5 0.1 2 21 901 920 900 921 0.93
5 19 0.00074 0.064 13.8 0.2 2 23 1056 1078 1055 1078 0.95
6 19 0.0021 0.18 12.4 0.1 1 23 1086 1109 1086 1109 0.96
7 19 1.7e-05 0.0015 19.0 0.1 2 23 1196 1217 1195 1217 0.97
8 19 0.00031 0.026 15.0 2.9 2 23 1299 1321 1298 1321 0.97
9 19 0.024 2.1 9.1 0.2 2 23 1330 1352 1329 1352 0.95
10 19 0.0023 0.2 12.3 0.1 1 23 1365 1388 1365 1388 0.97
11 19 0.00013 0.011 16.2 1.1 1 23 1446 1468 1446 1468 0.99
12 19 0.0021 0.18 12.4 0.9 1 23 1476 1499 1476 1499 0.96
13 19 0.81 70 4.3 0.3 2 19 1507 1524 1507 1525 0.93
14 19 3.4e-05 0.0029 18.0 1.4 3 23 1621 1641 1620 1641 0.98
15 19 0.0054 0.46 11.1 0.1 1 23 1676 1698 1676 1698 0.97
16 19 0.00063 0.054 14.0 0.6 2 23 1787 1809 1786 1809 0.93
17 19 0.59 50 4.7 0.1 2 20 1829 1847 1828 1849 0.91
18 19 0.007 0.6 10.8 0.4 3 23 1864 1884 1864 1884 0.98
19 19 0.00011 0.0093 16.5 2.1 1 23 2207 2229 2207 2229 0.98

Sequence Information

Coding Sequence
ATGTGCGACGCTGCGGCAACGGCGTCGGAGACGGCGACCACGGCGCTGCTGGCAGGAGTTAGTGCAGTGACGGTGCCTGGGGCTGGAACACCGGGAGCAGCTGCCCCCAGCACAACTACATCCACATCCCAGCCGGAAGCTTCggcgacagcaacagcaaccacgatgacgatgacggcGGCGACGACGCCGCTGGCGACGAAGAGCGAGCGGGCGGCGCGACAAAACTGCTGTCGCCTGTGCATCGCTCCGGCCACCGAGTGCATCTCGATCATCAACAGCTATGCAGCGGACAAGGAGCCGCTGTCCACCAAGATCCACAACTGCGTCAGCATCAAGATCACCGCCCAGGATCGACTGTCGCTGCATATATGCCACGCCTGCATCAGCTACCTGAACTCGTGGCAGAGCTTCAAGAACCGCTGTCACAGCTCACAGACAAAGCAGCGCCAGTGGCTGGAGACCAGCAACAAGAGCAAGCTCTTCAACTATCTGGACCTGAACAGTGCCGAGAACGGTGGAGCCTCCTCCgatcatcagcatcaacagcattCGCAGGCGGCGCATCAACCGCAATCGGAGAATGAGCTTGACGCAGAGAAGGCGATGGCACCCGCCACAACGGCCGCCAACATATTGGATGGCATACCATCGCTGAAGAAACGCAAATCCCTAACAGTCTATGTGAGTCCTAAACCGCAACAGCTGCCGCAGCATCAATTGCAGCAGttacagcagcagctgcagccacCGGCGGCCAGATTGACGTCGACGGCGACCGGCAACAACGCGCAGCAAACGTTGCAGACCCTTCTCCTGCAGGTGCCAGCATCGACGGCGAGCTCCTCTTCCActatcaccaccaccacttcTGTATcccagcagcgggagcagcagcatcagcgcCAGCAGTCGCATCAGTATCGCAGataccatcaccatcatcatcatcagcagcagcagcagcaacatagtcagcagcagcaacagcagcggagCAAGCAACACcatcatcagcaacagcagcagcagcaacaccgaCGCCACCGTCAGTTTCGTCCTCAGAGGCCAACAACGGTGCCGGTACCGAATCCGGCTCCATCGTTGCGCAAATACAAACCCAAACTGTACTTGCCATTGGATATAGCAGTGCCACCACTGCCACCGCTGCCATCAGTTGCTCCGGGATCGATTGCTGCTTCCGCTTCTGCGTCTGCGTCTGCCCCTGCACCTGCTGGCGTTCCTGCTGCTGAACAGCCGCTGCTTTCGGGATTCTCCGGTTCTCTAACCGGAATTGCTGGTGTGGGTGGTGGAATGGAGAGCCTGTCATTGTCGCTGCCACTTGATTTCAGTCAAAGCTGCAGTAGCGGTCACGTCCAACAGACTGGTCTGTTGCCCCTGGCCACggccacagccacagctacGGCAAcgtccacgtccacgtccaATCCTACGGGCATCGCGTCAGCCACTGCCACTTCTGGCACTGGCTCTGCATCTGCAACAGCATCCGTGTCCACGGCTCCGCTGCTCATGCCGCCGCTGCCAGCGTTGCCCATCAAAGATGAGCCCATTGACACGGACGATGACTACCAGATGAAGATGATAGACGAGTCCGACGACATGGTCGATCCCACAATGTTCCTAGAGCGTTCCGAGCACGAGGGCGATATGCCGTTAATGGCCTCGGAATACGACTATACGGCCCAGCATGGCGTTAATGCCCATTCTTTGGCCGCCGGCCTGCCACCGAATGCTGTGGCCAATGTGGCCGCCGCCGGGGATTCCAAGGTGGCCAGCTGTCGTGCCTGCAGCCTACAGTTCTCCACCCGAGCGAATGCCCGTCGACATGAACGGAATCTGCACCCGAACCTCTTCCAGCTATCCACGGACTCGCTCCACAATACGTCAGTTACAAAGCCAACGCCAGCCTTGGCCGCCGCATTGGAAATTCAACgggcggcagctgcagcggccaCCGCAGAGGCGAATCGTGCTGTGGGCGCTGCCGGTGGTAATATCACTCCACAGAAATACCGTCAGGTGGTGATGAATGCATTCATCAAATGCGAGGGCGGCGGCTATGACTATGACAATCCGGAGCAGTACCGTCCACTGCTCACCCACGACAAGGTGGAGTTCATCGAACAGAACGAGGAGTTTCTCGAGCAGTACCAGACGATgacctgccgctgctgcagcaagTACTTCAGCACGTACAAGAACTTCATGGCGCACGTGCGCAAGAAGTATCCGCTGCTGCCGCGCAATCTATGCTTCAACTGCCTCAAGATGAACGACTCCAAGGCGCTGTTCATCTCGCATCTGAAGAAGCGCAACTGCATAAATCTCTACAGGGTTTTAAATACGCTGCGTGGCAAGACCCCAGTGCTACCCATCTCTGCCACGGATGCGGATGCAACTGAGGCTGCTGACGACGGAGTCACAGCCACAGCTGTAGCGGTGGCAGATGCCGCCGGAGCAGGTGCTGTCACAATGGCCAGTCCCACGGTGACCATTAGTGGAGAGACTGCCGCTACACCCGGTGAACGTCCAGAGAAGCTGCGCGccaaggagctgctggtgAACAAGCTATACGAATGCAAGCTCTGCCCTAAGGGATTCCGCACCAAGCACGAGTTCCGCACCCATGTCTACGACAAGCATGCGGATGTCCAGCGCAAGGACAACAACTCGATACAGTGCAGCTTCTGTGGCCTGGACTTTGCCGATCCGGTGGACAGGCGCCGGCACTACAACAACATGGACTGCATTGTCCGATTGCGCTGCATGACGTGCGATGCCAAGCTGGAGACGCACCAGCGATTCCTCGATCACGTCTACCAGGATCATCTGGGCGGCGTGGGCGGTGGCGCTGGCGGTGCCAGTAGTGATAATGCCTCCACAACGGGTAGCGGCCTGGCCAGGAGCAACAGTATGGAGCATTCGCCGGGCAAAAGGAGTCTGCTCGGTGCCCTGGGCATTGGCGTTGGATCATCGGCGGAAGAATCGCGCAGCAGCAGTGTGGCGCCCACGCTAACATCCACGCCCAAACCAGCGGGAGGAGGCACAGCCACAACGGCCTCCTCAGCCTCCGCGCCCAGTTCATCGAATCGTGGTGATGCGGCCGCACCCAAGTCCCAGTACTTTTCACGAATGCCACAGGTGTGTCCCATTTGCGGACAGCAATACAATAACTACAACAACGTGCTGCGCCACATGGAATCGAAGCATCCAAACAAGCTGCCCGAAACGTACAAGTGCGTACGCTGCGGCCTGGGCTATCCGCGGATCTCCTACCTGCGAGAGCACATGATCAATGTGCATGGCGTGGACAAGAATCGTCACTCGGGCGGCTTCGAGTACATTGTGAATGCGGATGCCGTTAAGCTGGCGGACGGCAGCACGCCGAATGTGTACACGGGTCGCTTCGACTACGTGATGAAGGACCTGATGTCGATAACAAATGGTGGGACCCTCGATGAGGACGATGAGGAGGCAGCGGGTAGCATGGCCAAGAAAATGCGACTcgacgacagcagcaacaacagcagcttgGCGGGCGtggccagccagcagcagaaggagtgTCCCATCTGCAATGCTGTGTTCAGCAACAACATTGGCCTCTCCAATCACATGCGCTCCCATTACACAGCCGCCAGTGTGGTGACCGCAGCTCTGGCGGCGGCCAATCGCATGACACCCAAATCACTGACCATAACAGCAACACCAGCGACAACGACGGACGCAAGTCCAGAGGCAGAGGCATCGGCCCCGGCCATGACCAGCAGCAATGTTGTGCCACCGGCGATGGCAAATCAAACGCCCCAGGAGCAGGCCGTATTCCGGCGAAGTTTGGATCAGGCGGCCGATCGTCGCTTCCGGCGAATGCGTTGCCGTATTTGCCAGCGGCGCTTCAGCTCAAAGAAGTCCTATCGCTACCACATGCTGACAGACCATCAGGTGCAGAATGTGCAGTTCATCAAATGCAAGCTGTGCAACGCGGAGTTTGCCTACGAGAAGGGTCTGAAGGTGCATCTGTTCAAAGTGCATGGACGGGCGATCAAGGATGAGATGATTATCAAGCAGTTTGAGTGCGAGGTCTGCTCGATTGTATACAgctcggagctggagctgcagcagcacaagCGGAGTGTCCACAAGCTGAcctcggcatcggcatcggttTCTGCTTCAGCCTCGGCATCCGCCTCCACTTCTGTCAAGATGGAGGACGATGTTTTGATGGACGAAGAGGTCAAGTCAACAGCCGATCTGTCCACCCTTTCGGCCAACGCCTCGGGACTGGGAGTGGGCACACCGCTGTACTGGTATCAGTGCAAATACTGCCCCTCCAACTTCAACACCAACAAGAAGCTGGCCATTCACATTAACTCGCATGACGAGTTCGACTCGAATGATTACTCCTGCAAGGATTGTGGCAACGTCTATAGCGGACGCAAGAGTCTATGGGTGCACCGGTACAAGAAGCATCCACAGGTGCCCGACCCGGCCGAGTGCTCGCTGTGCCGCAAGATCTTCTTCGATCGCCAGATGCTGGACAATCACACGCCCACCTGCAACCGCAAGCCCATCACCTCGACGGGtgcccaccagcagcagcagcagcagcagctacagcagCAGGATTcattgcagcaacagcaggcggcACTGCAAAGGGCCGTTTTCAGGCACAAGACGggcgacgatgatgacgaggaggatgatggccggcagcagcagcagccgctggaGGAAAGCGATAGCAATGGGGCGGCAACAGcgtcggctgctgctgcagcagtggcagctTCGGCCCAGGCTGCCCTGAAGATACGCATTCCGGAGGTGGCCTGTACCATTTGCGGGGCCCGGTTCACCGATCAGGAGCACTTTAGCAAGCACATCCAAAAGCACGAACAGGAGCTGTATGTGGATAATCCGCTGGCGGCGATGTTCGATGATGGGCCGGCGGATGCTGGCCAGTTCCAGGTTGAGCGGCAGAATGAGAATGGGGAATATGCGTGCGATTTGTGCGCCAAGACGTTCCCCCAGGTGATTGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAACCCCATCGACGGCGAAGCGACACAGTTGACCAACAACAATCACActaccagcaacaacaacaacaacagcagcaacaactcgATGCTGCACCTCCGCGAGCTGCATGCAGTGGGCCTGATGCccaaccagcagcaacagcagctgcagcaggaacagcagagccgcagcagcaacaacaacaacatgaacCACAGcggcgggagcagcagcagcaagtcaATGAAGCGGAAGCGTGAGCTTAAATGCGAATACTGCGCCTCCACCttcatcagcaacaacaatctgCGCCGGCATATGTACGAGCTGCACAAGCACGAGGTGAGCAATCTCCCAGAGCCACCAATTATCCTGGTGGACGATCATCTACAGTGCCGTCGCTGTCAGCTCAGTTTCGAAACGAAGGAGCTGTGGATCGAGCACAAGCTGGCCGATGCCAAGGTGGTGCGTCCCTTCTGCCCCTTCCAGTGGGGCTGCGATCTGTGCGGCGAGTATCTGTCGCGAAAGGAGAAGCTAATGAATCACATTAACAATCATCTCAAGGAGGAGGTCATTGTCCCAGTGGCCACCAAGGCGGCCATTAAACGcgaagcggcggcggcaacggcaacagcagcgaCAGCTGCAAATACGGCGGAATTAACAGCAGATGAGGGAGTAGATCAAGATCGGGAGAACAAGGCTCGGGGCAACAAAGATAAGGCAACGACGGCGGTGGTGGCAGGTGGACAAAAAGATGTAGAAAGCGATGACCTGGACGAGGAGGATAGCTccggcgaggaggaggaggaaagtTCAGGCACGGGAGACGATGAGGACGATGAGGAAGATGACTCGGAAGATGACGAGGGCGATGGTGGCGAAGGTGAAGACGAGGAGGGTGTGCAGCCTGGTCAGCTGTTGactcaacaacagcagcagccgcagcagcagcacaaccaGGATGACGATGACCTGGTCGAGGAGGTCAATAGCTCGGATGACGAAGATGATGGCGAGGTGGagagcgacgacgacgacgacgatgtcGGGGAGGATGACGATGAAGGGGATGTTGACGATGAGGATGACGATGTGGAGGAACCGGAACCGGTGGCAGTGGCTCAACCCCTGATGAATGGCAATGGCAAGTCAAAAATGCCGCCACTTATCATGCCCAGTTCcgacgacgatgaggatgTGGATGATGGTGTTATGCCCATCGATGACATTATTGAAGAGGAATTCGATGAAGATGAGGCCGAGCCAGATGCCGATCCCGATCCGGATGTGGATGATGCCATCGAGGAGGTGGATGACGATGATTTGGATGaggatggagatggagatgatgtggaaatggagatggaggtggagatggaggaggaggtggtatCGGCAGCCTCCTCCTCGGAGAGCGAGTCCTCGTCAACGACCAcgtccaatacgcattcgcattcgcattcacaTTCCACGGGTGAGCGGCGTAAGAAGAGGGCTGACGATCAGTTGAATGATCCCAGCTTTACCTGTGATCTATGTCAACTTTGTTTCGATTCCCAGGAGCTACTCCAGAGCCACATCAAAAGCCATTTTCTCAATGGGCCAAAGCTCACAGtggcatcagcagcagcaggcagcaaggCGGCGTCACTAGCAACCACAACggcggcaccaccaccagccaAGACGAAGCCTGACTCCAAGTCGGCCCtgctggccaacaacaacaataagagcAGCAAGactgttgcagctgcagctgcagctgccacaAACTGA
Protein Sequence
MCDAAATASETATTALLAGVSAVTVPGAGTPGAAAPSTTTSTSQPEASATATATTMTMTAATTPLATKSERAARQNCCRLCIAPATECISIINSYAADKEPLSTKIHNCVSIKITAQDRLSLHICHACISYLNSWQSFKNRCHSSQTKQRQWLETSNKSKLFNYLDLNSAENGGASSDHQHQQHSQAAHQPQSENELDAEKAMAPATTAANILDGIPSLKKRKSLTVYVSPKPQQLPQHQLQQLQQQLQPPAARLTSTATGNNAQQTLQTLLLQVPASTASSSSTITTTTSVSQQREQQHQRQQSHQYRRYHHHHHHQQQQQQHSQQQQQQRSKQHHHQQQQQQQHRRHRQFRPQRPTTVPVPNPAPSLRKYKPKLYLPLDIAVPPLPPLPSVAPGSIAASASASASAPAPAGVPAAEQPLLSGFSGSLTGIAGVGGGMESLSLSLPLDFSQSCSSGHVQQTGLLPLATATATATATSTSTSNPTGIASATATSGTGSASATASVSTAPLLMPPLPALPIKDEPIDTDDDYQMKMIDESDDMVDPTMFLERSEHEGDMPLMASEYDYTAQHGVNAHSLAAGLPPNAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSLHNTSVTKPTPALAAALEIQRAAAAAATAEANRAVGAAGGNITPQKYRQVVMNAFIKCEGGGYDYDNPEQYRPLLTHDKVEFIEQNEEFLEQYQTMTCRCCSKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNTLRGKTPVLPISATDADATEAADDGVTATAVAVADAAGAGAVTMASPTVTISGETAATPGERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVGGGAGGASSDNASTTGSGLARSNSMEHSPGKRSLLGALGIGVGSSAEESRSSSVAPTLTSTPKPAGGGTATTASSASAPSSSNRGDAAAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRFDYVMKDLMSITNGGTLDEDDEEAAGSMAKKMRLDDSSNNSSLAGVASQQQKECPICNAVFSNNIGLSNHMRSHYTAASVVTAALAAANRMTPKSLTITATPATTTDASPEAEASAPAMTSSNVVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECEVCSIVYSSELELQQHKRSVHKLTSASASVSASASASASTSVKMEDDVLMDEEVKSTADLSTLSANASGLGVGTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECSLCRKIFFDRQMLDNHTPTCNRKPITSTGAHQQQQQQQLQQQDSLQQQQAALQRAVFRHKTGDDDDEEDDGRQQQQPLEESDSNGAATASAAAAAVAASAQAALKIRIPEVACTICGARFTDQEHFSKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATQLTNNNHTTSNNNNNSSNNSMLHLRELHAVGLMPNQQQQQLQQEQQSRSSNNNNMNHSGGSSSSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPIILVDDHLQCRRCQLSFETKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNHLKEEVIVPVATKAAIKREAAAATATAATAANTAELTADEGVDQDRENKARGNKDKATTAVVAGGQKDVESDDLDEEDSSGEEEEESSGTGDDEDDEEDDSEDDEGDGGEGEDEEGVQPGQLLTQQQQQPQQQHNQDDDDLVEEVNSSDDEDDGEVESDDDDDDVGEDDDEGDVDDEDDDVEEPEPVAVAQPLMNGNGKSKMPPLIMPSSDDDEDVDDGVMPIDDIIEEEFDEDEAEPDADPDPDVDDAIEEVDDDDLDEDGDGDDVEMEMEVEMEEEVVSAASSSESESSSTTTSNTHSHSHSHSTGERRKKRADDQLNDPSFTCDLCQLCFDSQELLQSHIKSHFLNGPKLTVASAAAGSKAASLATTTAAPPPAKTKPDSKSALLANNNNKSSKTVAAAAAAATN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00478146;
90% Identity
-
80% Identity
-