Basic Information

Gene Symbol
hang
Assembly
GCA_008042485.1
Location
VNJN01008867.1:25999-39575[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.29 20 5.7 1.0 3 23 516 537 515 537 0.93
2 19 0.94 66 4.1 3.1 3 22 645 664 643 664 0.89
3 19 0.00063 0.044 14.1 3.3 1 22 780 801 780 803 0.90
4 19 6.2 4.3e+02 1.5 0.0 2 21 815 834 814 835 0.91
5 19 0.00073 0.051 13.9 0.2 2 23 969 991 968 991 0.95
6 19 0.0021 0.15 12.5 0.1 1 23 999 1022 999 1022 0.96
7 19 1.7e-05 0.0012 19.0 0.1 2 23 1109 1130 1108 1130 0.97
8 19 0.0003 0.021 15.1 2.9 2 23 1214 1236 1213 1236 0.97
9 19 0.024 1.6 9.2 0.2 2 23 1245 1267 1244 1267 0.95
10 19 0.00058 0.04 14.2 0.1 1 23 1280 1303 1280 1303 0.97
11 19 0.00013 0.0092 16.2 1.1 1 23 1368 1390 1368 1390 0.99
12 19 0.002 0.14 12.5 0.9 1 23 1398 1421 1398 1421 0.96
13 19 0.6 42 4.7 0.2 2 19 1429 1446 1428 1447 0.93
14 19 3.4e-05 0.0023 18.1 1.4 3 23 1536 1556 1535 1556 0.98
15 19 0.0053 0.37 11.2 0.1 1 23 1591 1613 1591 1613 0.97
16 19 0.00062 0.043 14.1 0.6 2 23 1708 1730 1707 1730 0.93
17 19 0.57 40 4.8 0.1 2 20 1750 1768 1749 1770 0.91
18 19 0.0069 0.48 10.8 0.4 3 23 1785 1805 1785 1805 0.98
19 19 0.00011 0.0074 16.5 2.1 1 23 2082 2104 2082 2104 0.98

Sequence Information

Coding Sequence
ATGTGCGACGCTGCGGCAACGGCTTCGGAGACGGCGACCACAGCGTTGCTGGGTGGAGCCAGTGCAGTGACGGCGCCTGGAGCTGGAGCCAGTGCCACCAATACAAccgcatccacatccacatcccaGTCAGAAGCCTCTGCTTCGGCGACGGCAACACCAACCACAACGATGACGGCGGCAACGACGCCGCTGGCGACGAAGAGCGAGCGGGCGGCGCGACAAAATTGCTGTCGCCTGTGCATAGCTCCGGCCAGCGAATGCATCTCGATCATCAACAGCTATGCGGCGGACAAGGAGCCGCTGTCCACCAAGATCCACAACTGCGTCAGCATCAAGATCACCTCACAGGATCGACTGTCGCTGTATATATGCCACGCCTGCATCAGCTACCTGAACTCGTGGCAGAGCTTCAAGAACCGCTGCCTCAGCTCACAGACAAAGCAGCGCCAGTGGCTGGACACCAGCAACAAGAGCAAGCTCTTCAACTATCTGGACCTGAACAGTGCCGAAAACGGTGGAGCCTCCTCCgatcatcaccagcagcattCCCAGTCGCATCAACCGCAATCGGAGAATGAGCTCGACGCGGAGAAGGCGACATCAGCGGCCACAACGGCCGCCAACATATTGGATGGCATACCCTCGCTGAAGAAACGCAAATCCCTAACAGTCTATGTGAGTCCTAAACCGCAGCAGCTGCCACAGCATCAATTGCAGCAGTTGCAGCCACCGGCCAGATTGACGGCGACGGCGACCGGCACCAACGCGCAGCAAACGTTGCAGACCCTTCTCCTGCAGGTGCCAGCGCCAGTgccgaatccgaatccaaatccGGCTCCATTGTTGCGCAAATACAAGCCCAAAGTGTACTTGCCATTGGATATATCAGTGCCACCACTGCCACCGCTGCCATCAGTTGCTGCGGGACCGATTGCTGCTTCTGCCTCTGGTCCTGcgcctgccgctgctgccgttcCTGCTGCTGAACAGCCGCTGCTATCGGGATTCTCCGGTTTAACTGGAATTGCTGGTGTGGGTGGTGGAATGGAGAgtttgtcgttgtcgttgccaCTTGATTTCAGCCAAAGCTGCAGCAGCGGTCACGTCCAACAGTCGGGTCAGCTGCCCCTGGCCACGGTCACGGCCACAGCTACGGCTACGGCTACGGCAACGTCCACGTCCAATCCTACGGGCATCGCGTCAGCCACTGCCActtctggctctggctctggttCTGCATCTGCATCAGCATCCGTGTCAACGGCTCCGCTGCTCATGCCGCCGCTGCCAGCGTTGCCCATCAAAGATGAGCCCATTGACACGGACGATGACTACCAGATGAAGATGATAGACGAGTCCGACGACATGGTCGATCCCACAATGTTCCTAGAGCGTTCCGAGCACGAGGGTGATATGCCATTGATGGCCTCGGACTACGACTATACGGCCCAGCATGGCGTTAATGCCCATTCTCTGGCCGCCGGACTGCCACCGAATGCAGTGGCCAATGTGGCCGCCGCCGGGGATTCCAAGGTGGCCAGCTGTCGGGCCTGTAGCCTGCAGTTTTCCACCCGAGCCAATGCCCGTCGGCATGAACGCAATCTGCACCCGAACCTCTTCCAGCTCTCCACGGACTCGCTCCACAATACATCAGTTACGAAGCCAACGCCAGCTCTGGCCGCCGCATTGGAAATCCAGCGGgcggcagctgcagcggcCACCGCAGAGGCTAACCGTGCTGTGGGCGCTGCCGGCGGTAATATTACTCCCCAGAAATACCGTCAGGTGGTGATGAACGCGTTCATCAAATGCGAAGGCGGCGGCTACGATTATGACAATCCAGAGCAGTACCGTCCACTGCTCACCCACGACAAGGTGGAGTTCATCGAACAGAATGAGGAGTTCCTCGAGCAGTACCAGACGATGacctgccgctgctgcagcaagTACTTCAGCACGTACAAGAACTTCATGGCGCACGTGCGCAAGAAGTATCCGCTGCTGCCGCGCAACCTGTGCTTCAACTGCCTCAAGATGAACGACTCCAAGGCGCTGTTCATCTCACATCTTAAGAAGCGCAACTGCATAAATCTCTACAGAGTTTTGAATACGCTGCGCGGCAAGACACCAGTGCTCTCCACGGATGTGGATGCGGACATAGGAACGGCGTCGGCAGAAGATGGAGCCACAGCTGTAGCGGTGGCCGATGCCGGTGCAGGCGTTGTCACAATGGCCAGTCCCGCGGTGACCATTAGCGGAGAGACCGCCGGCACTCCCAGCGGCGGTGAGCGTCCAGAAAAGCTGCGCGCCAAGGAACTGCTGGTGAACAAGTTGTACGAATGCAAGCTCTGCCCCAAGGGTTTCCGCACCAAGCACGAGTTCCGCACCCATGTATACGACAAGCATGCGGATGTGCAGCGCAAGGACAACAACTCGATACAGTGCAGCTTTTGCGGATTGGATATTGCCGATCCTGTGGACAGGCGTCGCCATTACAACAACATGGACTGCATTGTGCGACTGCGCTGCATGACATGCGATGCCAAGCTGGAGACGCACCAGCGCTTCCTCGATCACGTCTACCAGGATCATCTGGGCGGcgtgggcggcggcggtggcggggCCAGCAGTGATAATGCCTCCACAACGGGCAGCGGCCTGGCCAGAAGCAACAGTATGGAACACTCGCCGGGCAAGAGGAGTCTGCTCGGTGCCCTGGGCATTGGCGTTGGCTCATCGGCGGAAGAGTCGCGCAGCAGCAGTGTGGCGCCAACACTGACATCCACACCCAAGCCAGCGGGAGGCGCGGCCACAGCGGCCTCCTCTGCCTCTGCGCCCAGTTCGGCCAATCGTGGCGATGCGGCCGCACCCAAATCCCAGTACTTTTCGCGAATGCCGCAGGTGTGCCCCATTTGCGGCCAGCAGTATAATAACTACAACAATGTGCTGCGCCACATGGAATCGAAGCATCCAAACAAGCTGCCCGAAACATACAAATGCGTGCGCTGCGGCCTGGGGTATCCGCGGATCTCCTATCTGCGGGAGCACATGATCAATGTCCATGGCGTGGACAAGAACCGGCACTCGGGCGGCTTTGAATACATCGTGAATGCGGATGCCGTTAAGCTGGCGGATGGCAGCACACCGAATGTGTACACGGGTCGTTACGACTATGTGATGAAGGACCTGATGTCGATAACAAATGGTGGGACCCTCGACGAAGACGATGAGGAGGCGCCAGGCAGCGTGGCCAAGAAGATCCGGCTGGacgacagcagcaacaacagcagcttGGCGGGTGTCGCCAGCCAGCAGCAAAAAGAGTGCCCCATTTGCAATGCCGTGTTCAGCAATAACATTGGCCTCTCCAATCACATGCGCTCCCATTATACAGCCGCCAGTGTGGTGACCGCAGCTCTGGCGGCCGCCAATCGCATGACACCGAAATCACTGACCATAACAGCaacaccagcggcagcagacGCTGGGCCGGAGGCAGCGGCATACACAGCATCGGCCCCGGCAATGGCCAGCAGCAATGCTGTGCCACCGGCGATGGCCAATCAAACGCCCCAGGAGCAGGCCGTATTCCGACGGAGTTTGGATCAGGCGGCTGACCGTCGCTTCCGGCGAATGCGTTGCCGGATTTGCCAGCGGCGTTTCAGCTCAAAGAAATCGTATCGCTACCACATGCTGACGGACCATCAGGTGCAGAATGTGCAGTTCATCAAGTGCAAGCTTTGCAACGCGGAGTTTGCCTATGAGAAGGGTCTGAAGGTGCATCTGTTCAAGGTGCACGGTCGGGCTATCAAGGACGAGATGATTATCAAGCAGTTTGAGTGCGAGGTCTGCTCGATTGTCTACAGCTCAGAGgtggagctgcagcagcacaagCGCAGTGTCCACAAACTGACCTCGGCATcggcctctgcctctgcctcggcCTCAGTATCGGCGTCTGCCTCTACTTCATCGAAAATGGAGGACGATGTTATGATGGATGATGAGGGCAAGCCAACAGCCGGTGGTGATCAGGCTGATTTGTCCACCCTTTCCGCCAACGCGTCGGGACTGGGAGTGGGTATGCCGCTGTACTGGTACCAGTGCAAGTACTGTCCCTCCAACTTCAACACCAACAAGAAGCTGGCCATTCACATTAACTCGCACGACGAGTTTGACTCCAATGACTATTCCTGCAAGGATTGTGGCAACGTCTATAGCGGACGCAAGAGTCTATGGGTGCACCGCTACAAGAAGCATCCACAGGTGCCAGATCCGGTCGAGTGCTCACTGTGCCGCAAGATTTTCTTTGATCGTCAGATGCTGGACAACCATACGCCCACCTGCAACCGCAAGCCAATCACCTCGACGGGTGCCCATCAGCAGCAGGATTcgctgcagcaacagcaggcggCACTGCAACGTGCTGTTTTCAGGCACAAGACGggtgacgatgacgatgaggaggatgatggacagcagcagctgctagAGGAGGGAGACAGCAATGGAGGGCCAACACAATCGGCATCGGGAAGCGCTGCTGTGGCGGTGGCAGCTACTGCACAGGCTGCACTGAAGATCCGCATACCGGAGGTGGCCTGCACCATTTGCGGGGCCCGGTTCACCGATCAGGAGCATTTTAGCAAGCACATCCAGAAGCACGAACAGGAGCTGTATGTGGACGATCCGCTGGCGGCGATGTTTGACGATGGGCCGGCGGATGCCGGTCAGTTCCAGGTTGAGCGGCAAAACGAGAATGGGGAATACGCGTGCGATTTGTGCGCCAAGACGTTCCCGCAGGTGATTGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAACCCCATCGACGGCGAAGCGACACAGTTGACCAACAACAATCACActaccagcaacaacaacaacaacaacaacagcagcagcaacaactcgATGCTGCACCTACGCGAGCTGCATGCGGTGGGCCTGATGCCcaaccaacagcagcaacagcagagcCACAACAGCCACTCGAGCAGCAActcgaacaacaacaacaacaacatgaaCCACAgcggaggcagcagcagcagcaagtcgATGAAGCGGAAGCGTGAGCTGAAATGCGAATACTGCGCCTCCACCTtcatcagcaacaacaatcTGCGCCGCCACATGTACGAGCTGCACAAGCACGAGGTAAGCAATCTCCCAGAGCCGCCGGTCATCTTGGTGGACGATCATCTCCAGTGCCGTCGCTGTCAGCTCAGTTTCGAAACAAAGGAGCTGTGGATCGAGCACAAGCTGGCCGATGCGAAGGTGGTGCGTCCGTTTTGTCCCTTTCAATGGGGCTGCGACCTGTGCGGCGAGTATCTGTCGCGCAAGGAGAAGCTGATGAATCACATTAACAACCATCTCAAGGAGGAGGTCATTGTGCCGGTGGCCACCAAGGCGGCCATTGATAGGGAAGCGGCGGCCACGGCAGCGACAGAAGCAGCTGCAAATGCGACGGATTTAACagcagatgatgatgatgaagatcGAGATGGGGCTCGGGACAACAAAGattcggcggcggcggctgcgatGGTAGCAGGAGCACAAAAAGAAGTAGAAAGCGATGACCTGGACGAGGAAGATAGCTCTGGCGAAGAGGAGGAAAGTTCTGGCACGGGCGACGATGAGGACGATGACTCCGATgatgacgaggaggaggatgacgaCGGCGATGGAGGCGAAGGTGAAGACGAGGAGGATGATGGCGAGGTAGAAAGcaacgatgacgacgacgacgatgtagaggaggatgatgacgatgaggaCGACGATGTGGAGGAACCGGAACCGGTTGCAGTGGCACTGGGGCCATCGCAACCGCTGATGAATGGCAATGGGAAGGCCAAGTCGAAAATGCCATCACTTATCATGCGTGGTTCCGacgatgaggatgatgatggtgTTATGCCCATCGATGACATTATCGAAGAGGAATTCGATGAGGACGACGCCATGCCAGATCCAGATGTCGATCCGGATATGGATGATGCCATCGAGGAGGTGGATGACGATGATTTGGATGAGGGGGATGACGTAGagatggaggaggaggtgaTATCGGCAGCCTCCTCATCAGAGAACGAGTCCACATCAACGAACACGTCCAATTCGCACTCGCATTCGCATTCACATTCCACGGGTGAGCGGCGTAAGAAGAGGGCTGACGATCAGTTGAATGATCCCAGCTTTACCTGTGATCTATGTCAACTTTGTTTTGATTCCCAGGAGCTACTCCAGAGCCACATCAAAAGCCATTTTCTCAATGGGCCAAAGCTCACAgtggcagccgcagcagcaatGCCAGCCGCCGTCGCCGCGGTAGCGGCGGCATCATCAAGATCGTCATTAGGAACGGGAACGGCGCCGCCACCAGCAAAGACGAAGCCTGACTCCAAGTCAGCGCTgctggccaacaacaacaataagagCAGCAAGACTGTTacagctgcagctgccacAAACTGA
Protein Sequence
MCDAAATASETATTALLGGASAVTAPGAGASATNTTASTSTSQSEASASATATPTTTMTAATTPLATKSERAARQNCCRLCIAPASECISIINSYAADKEPLSTKIHNCVSIKITSQDRLSLYICHACISYLNSWQSFKNRCLSSQTKQRQWLDTSNKSKLFNYLDLNSAENGGASSDHHQQHSQSHQPQSENELDAEKATSAATTAANILDGIPSLKKRKSLTVYVSPKPQQLPQHQLQQLQPPARLTATATGTNAQQTLQTLLLQVPAPVPNPNPNPAPLLRKYKPKVYLPLDISVPPLPPLPSVAAGPIAASASGPAPAAAAVPAAEQPLLSGFSGLTGIAGVGGGMESLSLSLPLDFSQSCSSGHVQQSGQLPLATVTATATATATATSTSNPTGIASATATSGSGSGSASASASVSTAPLLMPPLPALPIKDEPIDTDDDYQMKMIDESDDMVDPTMFLERSEHEGDMPLMASDYDYTAQHGVNAHSLAAGLPPNAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSLHNTSVTKPTPALAAALEIQRAAAAAATAEANRAVGAAGGNITPQKYRQVVMNAFIKCEGGGYDYDNPEQYRPLLTHDKVEFIEQNEEFLEQYQTMTCRCCSKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNTLRGKTPVLSTDVDADIGTASAEDGATAVAVADAGAGVVTMASPAVTISGETAGTPSGGERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDIADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVGGGGGGASSDNASTTGSGLARSNSMEHSPGKRSLLGALGIGVGSSAEESRSSSVAPTLTSTPKPAGGAATAASSASAPSSANRGDAAAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDEDDEEAPGSVAKKIRLDDSSNNSSLAGVASQQQKECPICNAVFSNNIGLSNHMRSHYTAASVVTAALAAANRMTPKSLTITATPAAADAGPEAAAYTASAPAMASSNAVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECEVCSIVYSSEVELQQHKRSVHKLTSASASASASASVSASASTSSKMEDDVMMDDEGKPTAGGDQADLSTLSANASGLGVGMPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPVECSLCRKIFFDRQMLDNHTPTCNRKPITSTGAHQQQDSLQQQQAALQRAVFRHKTGDDDDEEDDGQQQLLEEGDSNGGPTQSASGSAAVAVAATAQAALKIRIPEVACTICGARFTDQEHFSKHIQKHEQELYVDDPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATQLTNNNHTTSNNNNNNNSSSNNSMLHLRELHAVGLMPNQQQQQQSHNSHSSSNSNNNNNNMNHSGGSSSSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVILVDDHLQCRRCQLSFETKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNHLKEEVIVPVATKAAIDREAAATAATEAAANATDLTADDDDEDRDGARDNKDSAAAAAMVAGAQKEVESDDLDEEDSSGEEEESSGTGDDEDDDSDDDEEEDDDGDGGEGEDEEDDGEVESNDDDDDDVEEDDDDEDDDVEEPEPVAVALGPSQPLMNGNGKAKSKMPSLIMRGSDDEDDDGVMPIDDIIEEEFDEDDAMPDPDVDPDMDDAIEEVDDDDLDEGDDVEMEEEVISAASSSENESTSTNTSNSHSHSHSHSTGERRKKRADDQLNDPSFTCDLCQLCFDSQELLQSHIKSHFLNGPKLTVAAAAAMPAAVAAVAAASSRSSLGTGTAPPPAKTKPDSKSALLANNNNKSSKTVTAAAATN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00478146;
90% Identity
-
80% Identity
-