Dpla002275.2
Basic Information
- Insect
- Drepanosiphum platanoidis
- Gene Symbol
- Lac_1
- Assembly
- GCA_948098885.1
- Location
- OX402531.1:12022471-12028489[-]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.19 1e+03 -0.4 0.0 46 79 11 43 6 64 0.75 2 2 1.2e-07 0.00063 19.6 0.0 31 97 84 154 78 162 0.78
Sequence Information
- Coding Sequence
- ATGACGACACCAGAGgtcgcgtggctgagagtggacacacagaccatactttccatacagaccctagtggtgacgaagaacgaccggatggaggtaacgcacacggaccaccgggtgtggaggctacacatcaggaacgtacggccgtccgaccgcgggttttacatgtgtcagataaacacggatcccatgaagaatcaaatcgcttacctcgacgtagtcgtgccaccggatattttagactacccgactagttcagacatggtcatacacgaaggaagtaacgtaacattacaatgtgcagctactgggtacccaaatccgacgataacatggcgaagagaAGACAACCATAACATCGTCATTTCTAATGCTTTAACTGTTGCTGTTGTGGATAGCCCGACTTTAACCTTTCACCGAGTCACGAGGCAGcacatgggctcgtatttgtgcattgcttccaatggtgtacccccgactgtcagcaagcgtattacattaattgtccactTTGCCCCTATGGTTTGGATTCAAAATCAACTGGTCGGCGCCTTTGAAGGAGACCGACTGTCGATTGAATGCCACGTTGAAGCGTTTCCTAAGTCGATAAATTATTGGTCGTCGGAAAACGGAAACCTACTTACCCAGGGAGATAATTACGATACGACGTTTAAAGAATCTACTTACAAAATAGAAATGAGACTAACTATCAATCGAGTGAAAGAAGAACATTTCGGCACTTATCATTGCGTTTCGAAAAACTCACTGGGCGCAACAGACGGAACAATAAAAGTTTACAAGCTACCAGGGAAAAATTGGAACAATAATTATCAAACATTTGCTACGGCTTCGAATACTGGTCTGCAACAAATTACAGGATCCACGTCCGATGTCGAGAACCAAAACAACGGTATATCGATCACGTTAAAGCCAACATTAATTTATTATTGTATTATAGTATTGTGTGGAAAACTGATATCTAATTAA
- Protein Sequence
- MTTPEVAWLRVDTQTILSIQTLVVTKNDRMEVTHTDHRVWRLHIRNVRPSDRGFYMCQINTDPMKNQIAYLDVVVPPDILDYPTSSDMVIHEGSNVTLQCAATGYPNPTITWRREDNHNIVISNALTVAVVDSPTLTFHRVTRQHMGSYLCIASNGVPPTVSKRITLIVHFAPMVWIQNQLVGAFEGDRLSIECHVEAFPKSINYWSSENGNLLTQGDNYDTTFKESTYKIEMRLTINRVKEEHFGTYHCVSKNSLGATDGTIKVYKLPGKNWNNNYQTFATASNTGLQQITGSTSDVENQNNGISITLKPTLIYYCIIVLCGKLISN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01305314;
- 90% Identity
- iTF_01432800; iTF_01169624; iTF_01305314; iTF_00135080; iTF_01032651; iTF_01167371; iTF_01303953; iTF_01304625; iTF_00972820; iTF_00018780; iTF_01328382;
- 80% Identity
- -