Ttri042750.1
Basic Information
- Insect
- Therioaphis trifolii
- Gene Symbol
- Lac
- Assembly
- GCA_027580255.1
- Location
- CM050410.1:28268947-28284637[+]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.21 3.2e+03 -0.5 0.0 46 68 72 94 61 123 0.73 2 2 3e-08 0.00046 21.6 0.0 31 97 145 215 139 223 0.81
Sequence Information
- Coding Sequence
- ATGAAAAAAGAAATATTAAAAAAAGGAAATAATAATTATATACTGTTTTTGCTGAAAAAATTCAAACACTTTGCTGAGAAAGTTAACAATCACTATCTTAATGAAAACTTAGTTGATATTGAAGACGATTTTCCTCAAAAAAGAATTTCTAAAAAAAAAATATTACCTGGTGAAAATTGTCAAGATGAAGACAGACGTGTGGCGTGGCTGAGAGTCGACACACAGACCATACTTTCCATACAGACTCTCGTGGTAACAAAAAATGACCGAATGGAGGTAACACACACGGACCATAGGGTGTGGAGGTTACATATTAGAAACGTTCGGCCGTCAGATCGTGGTTTTTACATGTGTCAAATAAATACGGACCCAATGAAGAATCAAATCGCATATCTAGACGTCGTTGTACCACCAGATATTTTAGACTATCCAACTAGTTCAGACATGGTAGTCCACGAAGGTAGTAACGTAACGTTACAATGCGCCGCTACAGGATATCCAAACCCAACAATAACATGGCGAAGAGAAGACAACCATAATATTGTACTCTCTAACACTCTAACTGTTGCAGTTGTGGACAATCCAACTTTAACATTTCATCGAGTCACAAGGCAACACATGGGTTCATATCTTTGTATTGCTTCCAATGGTGTGCCACCGACTGTTAGCAAACGCATTACATTAATCGTTCACTTTGCTCCAATGGTTTGGATTCAAAATCAACTTGTCGGTGCGTTTGAAGGAGATCGATTGTCAATAGAATGTCACGTTGAAGCATTTCCTAAATCAATTAATTATTGGTCCTCAGAAAATGGAAATTTACTGACTCAAGGAGACAATTACGATTCATCATTCAAAGAATCCACTTATAAAATAGAAATGAGATTGACTATCAATCAAATGAAAGAAGAACATTTCGGTACATACCACTGCATTTCAAAAAATTCTCTAGGCGCAACAGATGGAACTATCAAAGTTTACAAACTACCTGGGAAAAATTGGAACAATAATTATCAGACATCTGTCACTGCTTCAAATAATGGTTTGCAACATATAACAGGATCTACATCTAATGAAGAAGGCAAAAACAATGGTATATCAACTAATCTGAAGCCTATGCTAATTCATTGTTGTATTTTCTTTTATTTATTAGTACTATTTAAACTATTATAA
- Protein Sequence
- MKKEILKKGNNNYILFLLKKFKHFAEKVNNHYLNENLVDIEDDFPQKRISKKKILPGENCQDEDRRVAWLRVDTQTILSIQTLVVTKNDRMEVTHTDHRVWRLHIRNVRPSDRGFYMCQINTDPMKNQIAYLDVVVPPDILDYPTSSDMVVHEGSNVTLQCAATGYPNPTITWRREDNHNIVLSNTLTVAVVDNPTLTFHRVTRQHMGSYLCIASNGVPPTVSKRITLIVHFAPMVWIQNQLVGAFEGDRLSIECHVEAFPKSINYWSSENGNLLTQGDNYDSSFKESTYKIEMRLTINQMKEEHFGTYHCISKNSLGATDGTIKVYKLPGKNWNNNYQTSVTASNNGLQHITGSTSNEEGKNNGISTNLKPMLIHCCIFFYLLVLFKLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01305314;
- 90% Identity
- iTF_00468737;
- 80% Identity
- -