Basic Information

Insect: Dolichoris vasculosae
Gene Symbol: -
Assembly: GCA_018907195.1
Location: JACCHY010000013.1:4142102-4158956[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 7.6e-05 0.018 16.8 1.4 1 23 389 411 389 411 0.96

2 18 3.1e-06 0.00077 21.2 1.9 1 20 417 436 417 439 0.94

3 18 2.5e-05 0.0061 18.3 0.7 1 23 445 467 445 467 0.98

4 18 6.1e-05 0.015 17.1 4.4 1 21 473 493 473 495 0.95

5 18 1.9e-05 0.0046 18.7 4.6 1 23 501 523 501 523 0.99

6 18 1.9e-05 0.0046 18.7 5.3 1 23 529 551 529 551 0.97

7 18 7.2e-06 0.0018 20.0 7.1 1 23 557 579 557 579 0.97

8 18 7e-08 1.7e-05 26.4 2.7 1 23 585 607 585 607 0.98

9 18 5.2e-05 0.013 17.3 6.7 1 23 613 635 613 635 0.97

10 18 1.6e-05 0.0039 18.9 5.8 1 23 641 663 641 663 0.98

11 18 4.3e-07 0.0001 23.9 2.9 1 23 669 691 669 691 0.98

12 18 6.4e-06 0.0016 20.2 7.8 1 23 697 719 697 719 0.98

13 18 2e-05 0.0049 18.6 9.1 1 23 725 747 725 747 0.98

14 18 2.6e-05 0.0064 18.3 7.5 1 23 753 775 753 775 0.98

15 18 0.00075 0.18 13.7 8.8 1 21 781 801 781 803 0.94

16 18 9.7e-06 0.0024 19.6 0.4 1 23 809 831 809 831 0.98

17 18 0.023 5.6 9.0 4.5 1 23 841 863 841 863 0.98

18 18 3.7e-07 9.1e-05 24.1 1.3 1 23 869 891 869 891 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	7.6e-05	0.018	16.8	1.4	1	23	389	411	389	411	0.96
2	18	3.1e-06	0.00077	21.2	1.9	1	20	417	436	417	439	0.94
3	18	2.5e-05	0.0061	18.3	0.7	1	23	445	467	445	467	0.98
4	18	6.1e-05	0.015	17.1	4.4	1	21	473	493	473	495	0.95
5	18	1.9e-05	0.0046	18.7	4.6	1	23	501	523	501	523	0.99
6	18	1.9e-05	0.0046	18.7	5.3	1	23	529	551	529	551	0.97
7	18	7.2e-06	0.0018	20.0	7.1	1	23	557	579	557	579	0.97
8	18	7e-08	1.7e-05	26.4	2.7	1	23	585	607	585	607	0.98
9	18	5.2e-05	0.013	17.3	6.7	1	23	613	635	613	635	0.97
10	18	1.6e-05	0.0039	18.9	5.8	1	23	641	663	641	663	0.98
11	18	4.3e-07	0.0001	23.9	2.9	1	23	669	691	669	691	0.98
12	18	6.4e-06	0.0016	20.2	7.8	1	23	697	719	697	719	0.98
13	18	2e-05	0.0049	18.6	9.1	1	23	725	747	725	747	0.98
14	18	2.6e-05	0.0064	18.3	7.5	1	23	753	775	753	775	0.98
15	18	0.00075	0.18	13.7	8.8	1	21	781	801	781	803	0.94
16	18	9.7e-06	0.0024	19.6	0.4	1	23	809	831	809	831	0.98
17	18	0.023	5.6	9.0	4.5	1	23	841	863	841	863	0.98
18	18	3.7e-07	9.1e-05	24.1	1.3	1	23	869	891	869	891	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAGCAGCATGCTCTGCCAGCGACAACGCAGGCACAACAAGAGGAAGTAAGCGTGGGTCAAAGCGGTCGCCCCTCGTATCCAGGTGGTTTGGCAACTTCAACAAGCCTTGGCAATGTAGGGAGCAATTCTCACTCATCCGCAGACCTACGTGTAGGTACAGCTGTAGCATTAGCCTCCTCGGTAGCAAAGTACTGGGTCCTCACCAATCTTTTTCCTGGGCCGATACCACAGGTATCTGTGTATCACCATCCTCATCACCGCAGTGGTACAGGAGGTGGAGAAACTCAGGGAACCAAAGATTCAGCAACACTGCTAAACCAAGATATGTCATTAACTTCTGGTACACACCATCAGACATCAACTTCGCATCATCAGTCATCAGTCAGCAGAAGTAGCCATCACAGCTCCCTGCAGACCACTGCACAGATTCCAGTCTCTTTGCCAGGACTTAATCTGGATGGGAGTCACCTTCAAGCAAGTAATGCACAGAACACAGCCCAGGCTAGCCAAAATCAAAGTTTATCAAGGGATATCAAACCTAAAGAAGAGTCATCAGATCGTTGCAACGATAATCAGGTGCACTCTCATGTTCAACGTGACCACCAGCATCAGCAAACCCAGAATTTGCAACAGAATTTAATGCATCAACAACAGCAAATTGGTGTGAACATAGGAGGTGCTTCTACTGCAGATGGTCCCTCTTCTAGTGGCGTAGACAAAGTTGAAAAGAAAGAAGATATACGTCAATTAAATATGACCCAATTTCAAGTACCGGATTTGAAATCAGGAGGGCATATGATGGATGTCCGAACTGCAGATGGATCTATTGTTAAAATCAGCACTGCAAGTGATCAAGATCTTGCAAAAACCTTAGGTGTTGATATTTCTCAATATATTAATAAGGGGGCTGTTAATGTTGAAGAATTGAATCAAATAAATCAGTTACTGGCCTATCACGAAGTCTTTGGAAAACTGCAGAGTGAAATAGCTGCAGGTACTACTTTAATCGGAGGTACGGTACCGACACAGACAGTAACGACAATACAAAACGGCACTCCTTTAGTTCAACAAGTGCAGCTCAACAAATTTGACATTAAAACAAGCGATGGTGAAGCGACACCGGGACCAAGCGGTTCACCAGTATCGGTTGGCAGTCACGCATGCGAAGTTTGTGGCAAGATTTTTCAATTTCGTTATCAACTGATTGTTCATCGAAGATATCACACAGAAAGAAAACCCTTTACATGTCAGGTATGTGGTAAGGCATTTACTACTGCAAGTGATTTAACACGTCATGGAAAATGTCATTTGGGCGGCTCTATGTTCACATGTGCGGTCTGCTTTCATGTATTTGCTAATGCACCATCATTAGAACGACATATGAAACGTCACGCGACTGATAAGCCATACAATTGTACAGTTTGTGGTAAAAGTTTTGCAAGGAAAGAACACCTTGATAATCATACTAGGTGTCATACAGGAGAAACTCCATACAGATGCCAGTACTGCGCTAAAACATTTACTCGAAAAGAACATATGGTAAACCATGTTCGTAAGCACACAGGAGAAACTCCTCATCGATGTGATATTTGCAAAAAATCGTTTACGCGTAAGGAGCATTTTATGAATCATGTTATGTGGCACACTGGGGAGACACCCCATCATTGTCAGGTTTGCGGGAAGAAGTATACACGTAAAGAGCATTTGGCTAATCATATGCGCTCTCACACAAACGATACGCCTTTCCGTTGTGAGATATGTGGCAAATCATTCACGCGTAAGGAGCATTTCACGAATCACATAATGTGGCATACCGGCGAGACGCCGCACCGCTGTGACTTCTGTTCGAAGACATTTACACGAAAGGAACACCTGCTGAATCACGTCAGGCAGCACACGGGTGAGTCACCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGGGAGACGCCATTCCGCTGCCAGTACTGTCCGAAAGCGTTTACGCGGAAGGACCACCTGGTGAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACGAAATCCTTCACGCGGAAGGAACATTTGACAAATCACGTGCGTCAACACACAGGCGAATCGCCTCACCGCTGCCACTTCTGCTCCAAGTCCTTCACGCGCAAGGAGCACCTGACGAATCACGTGCGCATCCACACCGGCGAGTCGCCTCATCGATGCGAGTTCTGCCAACGCACCTTCACGCGCAAGGAGCACCTCAACAACCATCTTAGGCAACACACTGGTGACTCGTCACATTGCTGCAACGTCTGTTCCAAGCCCTTTACCCGCAAGGAACACTTGATCAACCACATGCGCTGTCACACGGGCGAACGACCATTCGTCTGCACCGAGTGCGGTAAGAGCTTTCCCTTGAAGGGTAATCTACTTTTTCACATGCGCTCTCACAACAAGGGCAGCCAGGCCGAGCGTCCATTCCGTTGTGACCTTTGTCCCAAAGACTTCATGTGCAAGGGCCATCTGGTGTCTCACCGGCGTTCCCATTCGGATGAGCGGCCCCACAGCTGTCCGGACTGCGGCAAAACCTTCGTTGAAAAGGGCAATATGCTTCGGCACTTACGCAAGCATGCAGCCGAGGGTCCGCCCACGCAAGTTAGTAGTGCGGCTTCGGCCCTCGCTGGAACTCAACAGGGCCTACCTCTACCCCTACCCTCGGCTGCCGCAGCTGCAGCTGCGGTCCTCGTTGGCCACCCTCTAGCACCACCTCCAGCTCCGGCTGTCGGCCTGCCCCAGCATACAGTCGTCGTTCCGACGCCTCCGGGAGTCCTTGCCTCTTACTGA
Protein Sequence: MNSEQHALPATTQAQQEEVSVGQSGRPSYPGGLATSTSLGNVGSNSHSSADLRVGTAVALASSVAKYWVLTNLFPGPIPQVSVYHHPHHRSGTGGGETQGTKDSATLLNQDMSLTSGTHHQTSTSHHQSSVSRSSHHSSLQTTAQIPVSLPGLNLDGSHLQASNAQNTAQASQNQSLSRDIKPKEESSDRCNDNQVHSHVQRDHQHQQTQNLQQNLMHQQQQIGVNIGGASTADGPSSSGVDKVEKKEDIRQLNMTQFQVPDLKSGGHMMDVRTADGSIVKISTASDQDLAKTLGVDISQYINKGAVNVEELNQINQLLAYHEVFGKLQSEIAAGTTLIGGTVPTQTVTTIQNGTPLVQQVQLNKFDIKTSDGEATPGPSGSPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTTASDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLINHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSQAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVSSAASALAGTQQGLPLPLPSAAAAAAAVLVGHPLAPPPAPAVGLPQHTVVVPTPPGVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00286639;
90% Identity: iTF_01524167; iTF_00708081; iTF_00708660; iTF_01216951;
80% Identity: -