Basic Information

Insect: Eupristina verticillata
Gene Symbol: -
Assembly: None
Location: GWHALOE00000463:744730-759737[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 6.5e-05 0.0047 16.8 1.4 1 23 429 451 429 451 0.96

2 18 1.3e-05 0.00095 18.9 1.9 1 20 457 476 457 479 0.94

3 18 2.2e-05 0.0016 18.3 0.7 1 23 485 507 485 507 0.98

4 18 5.3e-05 0.0038 17.0 4.4 1 21 513 533 513 535 0.95

5 18 1.6e-05 0.0012 18.7 4.6 1 23 541 563 541 563 0.99

6 18 1.6e-05 0.0012 18.7 5.3 1 23 569 591 569 591 0.97

7 18 6.2e-06 0.00045 20.0 7.1 1 23 597 619 597 619 0.97

8 18 6.1e-08 4.4e-06 26.3 2.7 1 23 625 647 625 647 0.98

9 18 4.5e-05 0.0032 17.3 6.7 1 23 653 675 653 675 0.97

10 18 1.4e-05 0.001 18.9 5.8 1 23 681 703 681 703 0.98

11 18 3.7e-07 2.7e-05 23.8 2.9 1 23 709 731 709 731 0.98

12 18 5.5e-06 0.0004 20.1 7.8 1 23 737 759 737 759 0.98

13 18 1.7e-05 0.0013 18.6 9.1 1 23 765 787 765 787 0.98

14 18 2.3e-05 0.0016 18.2 7.5 1 23 793 815 793 815 0.98

15 18 0.00064 0.047 13.6 8.8 1 21 821 841 821 843 0.94

16 18 8.3e-06 0.0006 19.6 0.4 1 23 849 871 849 871 0.98

17 18 0.02 1.4 8.9 4.5 1 23 881 903 881 903 0.98

18 18 3.2e-07 2.3e-05 24.0 1.3 1 23 909 931 909 931 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	6.5e-05	0.0047	16.8	1.4	1	23	429	451	429	451	0.96
2	18	1.3e-05	0.00095	18.9	1.9	1	20	457	476	457	479	0.94
3	18	2.2e-05	0.0016	18.3	0.7	1	23	485	507	485	507	0.98
4	18	5.3e-05	0.0038	17.0	4.4	1	21	513	533	513	535	0.95
5	18	1.6e-05	0.0012	18.7	4.6	1	23	541	563	541	563	0.99
6	18	1.6e-05	0.0012	18.7	5.3	1	23	569	591	569	591	0.97
7	18	6.2e-06	0.00045	20.0	7.1	1	23	597	619	597	619	0.97
8	18	6.1e-08	4.4e-06	26.3	2.7	1	23	625	647	625	647	0.98
9	18	4.5e-05	0.0032	17.3	6.7	1	23	653	675	653	675	0.97
10	18	1.4e-05	0.001	18.9	5.8	1	23	681	703	681	703	0.98
11	18	3.7e-07	2.7e-05	23.8	2.9	1	23	709	731	709	731	0.98
12	18	5.5e-06	0.0004	20.1	7.8	1	23	737	759	737	759	0.98
13	18	1.7e-05	0.0013	18.6	9.1	1	23	765	787	765	787	0.98
14	18	2.3e-05	0.0016	18.2	7.5	1	23	793	815	793	815	0.98
15	18	0.00064	0.047	13.6	8.8	1	21	821	841	821	843	0.94
16	18	8.3e-06	0.0006	19.6	0.4	1	23	849	871	849	871	0.98
17	18	0.02	1.4	8.9	4.5	1	23	881	903	881	903	0.98
18	18	3.2e-07	2.3e-05	24.0	1.3	1	23	909	931	909	931	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAGCAACATGCTCTGCCAGCGACAACGCAGGCACAACAAGAGGAAGTAAGTGTGGGTCAAAGCGGTCGTCCTTTGTATCCGGGTGGTTTGGCAACTCCGACAACCCTTGGCAATGTAGGGAGCAATTCTCATTCATCCACAGACCTACGTGTAGGTACAGCTGTAGCATTAGCCTCTTCAGTAGCAAAATATTGGGTCCTTACCAATCTTTTTCCTGGGCCGATACCACAGGTATCGGTGTATCATCACCCACATCATCGAGGTAGTGCAGGAAGTGGTGAAACTCAAACAACCAAAGATTCAGCTGCACTGCTAAATCAGGAAATGTCGTTAACATCTGGTACACAACATCAAACTCCAAATTCACATCATCATCAATCATCAATTAATAGAAGTACTCAACATAACTCTCTGCAGTCTACTGCACAGATTCCAGTCTCTTTGTCAGGCCTTAATCTTGATGGAAGTCATCTTCAAACAAGTGTAAGTCATTTACAAGTAGCTCATGCCCAAATGCAGCAACAAATGCAAACTCAACAACAACAGCAGACACAATTACATCAGCAGCAGCAACCCCAATCTCACCATCCATTACAAAATCATCAAAATGCTCAAAATACAACTCAAGTCAGTCAAAACCTATCTAGGGACATCAAACCAAAGGAAGAGTCATCGGATCATTGCAGTGATAATCAAATGCACACGCACGTTCAGCGTGATCATCAGCATCAACAAGCACAAGATTTGCAACAAAGTCTAATGCATCAGCAACAGCAAATTGGTGTAAGCATTGGAAGTGCTTCTACTACAGATGGCTCTACCTCTACAGGAGTAGACAAAGTTGAAAAAAAGGAAGATATACGTCAATTAAATATGACCCAATTTCAAGTGCCGGATTTGAAATCAGGAGGTCATATGATGGATGTTCGTACTGCAGATGGATCTATTGTTAAAATAAGTGCTGCAAGTGATCAAGATCTTGCAAAAACCTTAGGAGTTGATATTTCTCAGTACATCAATAAAGGAGCTGTGAATGTTGAAGAGTTGAATCAGATAAACCAACTACTGGCTTATCATGAAGTATTTGGAAAATTACAGAGTGAAATAGCCGCTGGTACTACATTGATTGGTGGTACAGTACCGACACAGACAGTTACGACAATTCAAAATGGTACCCCCATCGTACAGCAAGTGCAGCTCAATAAATTTGACATTAAAACAAATGATGGTGAAGCAACGCCAGGTCCAAGCGGCTCACCTGTATCTGTAGGAAGTCATGCCTGTGAGGTTTGTGGCAAGATTTTTCAATTTCGCTATCAGCTTATTGTTCATCGAAGATATCATACGGAAAGAAAACCTTTTACATGTCAGGTATGCGGCAAAGCATTTACTACTGCAAATGATTTAACTCGTCATGGAAAATGTCATTTGGGAGGTTCCATGTTTACATGTGCCGTTTGCTTTCATGTTTTTGCTAATGCACCGTCATTAGAGCGACACATGAAACGTCATGCTACTGATAAACCTTACAATTGTACGGTATGCGGTAAAAGTTTTGCTAGGAAAGAACATCTGGATAATCACACTAGGTGTCATACAGGAGAAACTCCATATAGATGCCAATATTGCGCAAAAACCTTCACGCGTAAGGAACACATGGTAAACCATGTGCGTAAGCATACAGGAGAAACGCCTCATCGATGCGACATTTGTAAAAAATCGTTCACACGGAAAGAGCACTTTATGAACCACGTAATGTGGCACACTGGCGAGACACCTCACCATTGCCAAGTTTGTGGAAAGAAGTACACACGCAAAGAGCATTTAGCAAATCATATGCGTTCTCATACTAACGATACCCCGTTTCGTTGTGAGATTTGCGGCAAGTCCTTCACACGCAAAGAACATTTCACGAATCATATAATGTGGCATACTGGCGAGACACCACACCGCTGTGATTTCTGTTCAAAAACGTTCACTCGGAAGGAGCATCTGCTGAATCATGTCAGACAGCACACGGGTGAGTCACCACATCGATGCGGCTTCTGCTCCAAATCATTCACCAGAAAGGAACACCTTGTTAACCACATTCGCCAACACACAGGAGAGACGCCCTTCCGCTGCCAATACTGTCCGAAAGCATTTACGCGGAAGGATCACCTGGTGAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACGAAATCCTTCACGCGGAAGGAACATTTGACAAATCACGTGCGTCAACACACAGGCGAATCACCCCATCGCTGCCATTTCTGCTCCAAATCGTTTACGCGCAAAGAACATCTGACGAATCATGTACGTATTCATACTGGTGAATCACCACACCGTTGCGAGTTTTGTCAGCGCACCTTCACGCGTAAAGAACATCTTAACAACCACCTGAGGCAGCACACCGGCGATTCGTCACATTGCTGCAATGTTTGTTCCAAGCCCTTCACTCGTAAGGAGCACCTGATCAACCACATGCGTTGCCATACAGGCGAACGCCCGTTTGTCTGTACTGAATGCGGTAAGAGCTTCCCTTTGAAAGGTAATCTGCTCTTCCATATGCGCTCGCACAACAAGGGTAGTCAAGCTGAGCGACCATTTCGCTGCGACCTCTGTCCTAAGGACTTTATGTGTAAAGGCCATCTAGTTTCTCATCGACGCTCACATTCGGATGAACGACCTCATAGCTGTCCAGACTGTGGTAAGACTTTCGTTGAGAAAGGCAATATGCTTCGGCATTTGCGCAAGCATGCCGCAGAAGGTCCTCCAACGCAGGTTGGTAGTGCGGCGTCAGCTTTGACTGGAGTGCAACAAGGTCTACCCCTGCCCTCAGCCGCAGCCGCCGCAGCTGCTGTTCTTGTTGGTCATCCCTTAGCACCCCCCTCTACCCCAGCTGTCGGCTTACCACAACATACAGTCGTTGTACCCACGCCACCAGGAGTCCTCACTTCCTATTGA
Protein Sequence: MNSEQHALPATTQAQQEEVSVGQSGRPLYPGGLATPTTLGNVGSNSHSSTDLRVGTAVALASSVAKYWVLTNLFPGPIPQVSVYHHPHHRGSAGSGETQTTKDSAALLNQEMSLTSGTQHQTPNSHHHQSSINRSTQHNSLQSTAQIPVSLSGLNLDGSHLQTSVSHLQVAHAQMQQQMQTQQQQQTQLHQQQQPQSHHPLQNHQNAQNTTQVSQNLSRDIKPKEESSDHCSDNQMHTHVQRDHQHQQAQDLQQSLMHQQQQIGVSIGSASTTDGSTSTGVDKVEKKEDIRQLNMTQFQVPDLKSGGHMMDVRTADGSIVKISAASDQDLAKTLGVDISQYINKGAVNVEELNQINQLLAYHEVFGKLQSEIAAGTTLIGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKTNDGEATPGPSGSPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTTANDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLINHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSQAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVGSAASALTGVQQGLPLPSAAAAAAAVLVGHPLAPPSTPAVGLPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00286639;
90% Identity: iTF_00464122;
80% Identity: -