Basic Information

Insect: Wiebesia pumilae
Gene Symbol: -
Assembly: GCA_018907045.1
Location: JACCHZ010000127.1:4261915-4280593[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 7.9e-05 0.02 16.8 1.4 1 23 425 447 425 447 0.96

2 18 3.3e-06 0.00084 21.1 1.9 1 20 453 472 453 475 0.94

3 18 2.6e-05 0.0067 18.3 0.7 1 23 481 503 481 503 0.98

4 18 6.4e-05 0.016 17.1 4.4 1 21 509 529 509 531 0.95

5 18 2e-05 0.0051 18.7 4.6 1 23 537 559 537 559 0.99

6 18 2e-05 0.0051 18.7 5.3 1 23 565 587 565 587 0.97

7 18 7.6e-06 0.0019 20.0 7.1 1 23 593 615 593 615 0.97

8 18 7.4e-08 1.9e-05 26.3 2.7 1 23 621 643 621 643 0.98

9 18 5.4e-05 0.014 17.3 6.7 1 23 649 671 649 671 0.97

10 18 1.7e-05 0.0043 18.9 5.8 1 23 677 699 677 699 0.98

11 18 4.5e-07 0.00011 23.8 2.9 1 23 705 727 705 727 0.98

12 18 6.7e-06 0.0017 20.1 7.8 1 23 733 755 733 755 0.98

13 18 2.1e-05 0.0054 18.6 9.1 1 23 761 783 761 783 0.98

14 18 2.8e-05 0.007 18.2 7.5 1 23 789 811 789 811 0.98

15 18 0.00078 0.2 13.6 8.8 1 21 817 837 817 839 0.94

16 18 1e-05 0.0026 19.6 0.4 1 23 845 867 845 867 0.98

17 18 0.024 6.2 9.0 4.5 1 23 877 899 877 899 0.98

18 18 3.9e-07 0.0001 24.0 1.3 1 23 905 927 905 927 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	7.9e-05	0.02	16.8	1.4	1	23	425	447	425	447	0.96
2	18	3.3e-06	0.00084	21.1	1.9	1	20	453	472	453	475	0.94
3	18	2.6e-05	0.0067	18.3	0.7	1	23	481	503	481	503	0.98
4	18	6.4e-05	0.016	17.1	4.4	1	21	509	529	509	531	0.95
5	18	2e-05	0.0051	18.7	4.6	1	23	537	559	537	559	0.99
6	18	2e-05	0.0051	18.7	5.3	1	23	565	587	565	587	0.97
7	18	7.6e-06	0.0019	20.0	7.1	1	23	593	615	593	615	0.97
8	18	7.4e-08	1.9e-05	26.3	2.7	1	23	621	643	621	643	0.98
9	18	5.4e-05	0.014	17.3	6.7	1	23	649	671	649	671	0.97
10	18	1.7e-05	0.0043	18.9	5.8	1	23	677	699	677	699	0.98
11	18	4.5e-07	0.00011	23.8	2.9	1	23	705	727	705	727	0.98
12	18	6.7e-06	0.0017	20.1	7.8	1	23	733	755	733	755	0.98
13	18	2.1e-05	0.0054	18.6	9.1	1	23	761	783	761	783	0.98
14	18	2.8e-05	0.007	18.2	7.5	1	23	789	811	789	811	0.98
15	18	0.00078	0.2	13.6	8.8	1	21	817	837	817	839	0.94
16	18	1e-05	0.0026	19.6	0.4	1	23	845	867	845	867	0.98
17	18	0.024	6.2	9.0	4.5	1	23	877	899	877	899	0.98
18	18	3.9e-07	0.0001	24.0	1.3	1	23	905	927	905	927	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAGCAGCATGCTCTGCCAGCGACAACGCAGGCACAACAAGAGGAAGTAAGCGTGGGTCAAAGCGGTCGCCCTTCGTATCCAGGTGGTTTGGCAACTCCGAGCCTTGGCAATGTAGGGAGCAATTCTCATTCATCCGCGGACCTACGTGTAGGTACAGCTGTAGCATTAGCCTCTTCAGTAGCAAAGTACTGGGTCCTGACCAATCTTTTTCCTGGGCCGATACCACAGGTATCGGTGTATCACCATCCTCATCACCGAGGTGGTGCAGTAAGTGGCGAAATTCAAACAACCAAAGATTCAGCAGCACTATTAAACCAAGATATGTCATTAACCTCTGGTGTACACCATCAAACACCAACTTCACATCAGCAGTCATCGGTCAGTAGGAGTGGCCATCACAGCTCCCTGCAATCCACTGCACAGATTCCAGTCTCTTTGCCAGGGCTCAATCTTGATGGAAGTCACCTTCAAGCAAGTGTAAGTCACATGCAGGCAGCTCATGCCCAAATGCAGCAACAAATGCAAACACAGCAGACTCAATTGCATCAACAGCAGCAGCAACAAGCCCAGTCTCATCATCAGATGCAAAATCATCAGAATGCACAAAACACAACTAACCAAAATCAAAACTTATCCAGGGATAACAAATCTAAGGAAGAGTCATCGGATCGTTGCAACGAGAACCAAGTGCATTCTCACATCCAGCGTGATCACCAGCATCAACAAGCACAAGATATGCAACAGAGCCTATTGCATCAGCAACAACAGCAAATTGGTGTGAACATTGGAGGTGTTTCTGATGGTGCCACCTCCAGTGGAGTCGATAAAGTTGAAAAAAAGGAAGATATACGTCAGTTAAATATGACCCAATTTCAAGTACCTGATTTGAAATCAGGTGGTCACATGATGGATGTCAGAACTGCAGATGGATCTATTGTTAAAATTAGTGCTGCTAGTGATCAAGATCTTGCAAAAACTTTAGGAGTTGATATTTCTCAATATATCAATAAGGGAGCCGTGAATGTCGAAGAGTTGAATCAAATAAACCAGCTACTAGCGTATCATGAAGTTTTTGGAAAACTGCAGAGTGAAATAGCTGCTGGTACTACACTAATTGGAGGCACAGTACCAACGCAGACAGTTACGACGATACAGAACGGCACACCCATAGTGCAGCAAGTGCAACTCAATAAATTTGACATTAAGACAAGTGACGGTGAAGCGACGCCAGGCCCAAGTGGTTCACCTGTATCGGTGGGTAGTCACGCTTGCGAAGTTTGTGGCAAGATCTTTCAATTTCGCTATCAGTTGATTGTCCATCGAAGATACCATACAGAAAGAAAGCCTTTTACATGTCAGGTGTGTGGCAAAGCGTTTACTACTGCAAGCGATTTAACGCGTCATGGAAAGTGCCACTTGGGTGGTTCCATGTTTACATGTGCTGTTTGCTTCCATGTTTTTGCTAATGCACCGTCGCTAGAAAGACACATGAAACGTCATGCTACTGATAAACCATATAATTGCACAGTTTGTGGAAAAAGTTTTGCAAGGAAAGAACACCTTGATAATCATACTAGATGTCATACAGGAGAAACTCCTTATCGATGCCAATATTGCGCTAAAACATTCACACGCAAGGAACATATGGTAAATCACGTGCGTAAGCACACAGGAGAAACGCCTCATCGATGCGACATTTGCAAGAAATCATTCACGCGCAAGGAGCATTTTATGAACCATGTAATGTGGCACACCGGTGAGACACCTCATCATTGTCAGGTTTGCGGCAAGAAGTATACACGTAAGGAACATCTGGCTAATCATATGCGCTCTCACACCAACGACACGCCTTTCCGTTGTGAGATTTGCGGCAAGTCATTCACGCGTAAGGAGCACTTCACGAATCATATAATGTGGCATACCGGTGAGACGCCGCACCGCTGCGACTTCTGTTCGAAGACGTTCACGCGGAAGGAACACCTGCTGAATCACGTCAGGCAGCACACGGGTGAGTCACCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGAGAGACGCCCTTCCGCTGCCAGTACTGTCCGAAAGCGTTTACGCGGAAGGACCACCTGGTGAACCACGTCAGGCAACACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACGAAATCCTTCACGCGGAAGGAACATTTGACAAATCACGTGCGTCAACACACAGGCGAGTCGCCCCATCGCTGTCACTTCTGCTCCAAGTCGTTCACGCGCAAGGAGCACCTGACGAATCACGTGCGCATCCACACTGGCGAGTCGCCTCACCGCTGTGAATTCTGCCAACGCACCTTCACGCGCAAGGAGCACCTCAACAACCATCTCAGGCAGCATACAGGCGATTCGTCGCACTGCTGCAACGTCTGCTCTAAGCCCTTCACCCGCAAGGAGCATCTGATCAACCACATGCGCTGCCACACGGGCGAGCGTCCATTCGTCTGCACCGAATGCGGAAAGAGCTTCCCTTTGAAGGGTAATCTCCTCTTTCACATGCGATCGCACAACAAGGGCAGCCAAGCCGAGCGGCCGTTTCGCTGCGATCTCTGTCCCAAAGATTTCATGTGCAAGGGCCACTTGGTGTCCCACCGGCGCTCGCACTCTGACGAACGTCCCCATAGCTGTCCGGACTGCGGCAAGACCTTCGTCGAGAAGGGCAATATGCTCCGGCACCTTCGTAAGCATGCGGCCGAAGGTCCGCCCACGCAGGTCGGCAGCGCAGCCTCGGCCCTCACTGGAGCACAACAGGGCTTACCATTGCCGTCGGCCGCAGCCGCCGCAGCCGCGGTCCTCGTCGGTCATCCCTTGGCGCCACCTCCGGCTCCTGCCGTCGGTCTGCCTCAACACACGGTTGTCGTACCGACGCCCCCAGGTGTTCTCACATCCTACTGA
Protein Sequence: MNSEQHALPATTQAQQEEVSVGQSGRPSYPGGLATPSLGNVGSNSHSSADLRVGTAVALASSVAKYWVLTNLFPGPIPQVSVYHHPHHRGGAVSGEIQTTKDSAALLNQDMSLTSGVHHQTPTSHQQSSVSRSGHHSSLQSTAQIPVSLPGLNLDGSHLQASVSHMQAAHAQMQQQMQTQQTQLHQQQQQQAQSHHQMQNHQNAQNTTNQNQNLSRDNKSKEESSDRCNENQVHSHIQRDHQHQQAQDMQQSLLHQQQQQIGVNIGGVSDGATSSGVDKVEKKEDIRQLNMTQFQVPDLKSGGHMMDVRTADGSIVKISAASDQDLAKTLGVDISQYINKGAVNVEELNQINQLLAYHEVFGKLQSEIAAGTTLIGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKTSDGEATPGPSGSPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTTASDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLINHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSQAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVGSAASALTGAQQGLPLPSAAAAAAAVLVGHPLAPPPAPAVGLPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00286639;
90% Identity: iTF_00464122;
80% Identity: -