Basic Information

Insect: Eupristina koningsbergeri
Gene Symbol: -
Assembly: GCA_018907245.1
Location: JACCHV010000145.1:513449-524991[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 6.4e-05 0.024 16.9 1.4 1 23 359 381 359 381 0.96

2 18 1.3e-05 0.0048 19.1 1.9 1 20 387 406 387 409 0.94

3 18 2.1e-05 0.0079 18.4 0.7 1 23 415 437 415 437 0.98

4 18 5.2e-05 0.019 17.2 4.4 1 21 443 463 443 465 0.95

5 18 1.6e-05 0.006 18.8 4.6 1 23 471 493 471 493 0.99

6 18 1.6e-05 0.006 18.8 5.3 1 23 499 521 499 521 0.97

7 18 6.1e-06 0.0023 20.1 7.1 1 23 527 549 527 549 0.97

8 18 5.9e-08 2.2e-05 26.4 2.7 1 23 555 577 555 577 0.98

9 18 4.4e-05 0.016 17.4 6.7 1 23 583 605 583 605 0.97

10 18 1.4e-05 0.0051 19.0 5.8 1 23 611 633 611 633 0.98

11 18 3.6e-07 0.00014 23.9 2.9 1 23 639 661 639 661 0.98

12 18 5.4e-06 0.002 20.3 7.8 1 23 667 689 667 689 0.98

13 18 1.7e-05 0.0064 18.7 9.1 1 23 695 717 695 717 0.98

14 18 2.2e-05 0.0083 18.3 7.5 1 23 723 745 723 745 0.98

15 18 0.00063 0.24 13.7 8.8 1 21 751 771 751 773 0.94

16 18 8.1e-06 0.003 19.7 0.4 1 23 779 801 779 801 0.98

17 18 0.019 7.3 9.1 4.5 1 23 811 833 811 833 0.98

18 18 3.1e-07 0.00012 24.1 1.3 1 23 839 861 839 861 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	6.4e-05	0.024	16.9	1.4	1	23	359	381	359	381	0.96
2	18	1.3e-05	0.0048	19.1	1.9	1	20	387	406	387	409	0.94
3	18	2.1e-05	0.0079	18.4	0.7	1	23	415	437	415	437	0.98
4	18	5.2e-05	0.019	17.2	4.4	1	21	443	463	443	465	0.95
5	18	1.6e-05	0.006	18.8	4.6	1	23	471	493	471	493	0.99
6	18	1.6e-05	0.006	18.8	5.3	1	23	499	521	499	521	0.97
7	18	6.1e-06	0.0023	20.1	7.1	1	23	527	549	527	549	0.97
8	18	5.9e-08	2.2e-05	26.4	2.7	1	23	555	577	555	577	0.98
9	18	4.4e-05	0.016	17.4	6.7	1	23	583	605	583	605	0.97
10	18	1.4e-05	0.0051	19.0	5.8	1	23	611	633	611	633	0.98
11	18	3.6e-07	0.00014	23.9	2.9	1	23	639	661	639	661	0.98
12	18	5.4e-06	0.002	20.3	7.8	1	23	667	689	667	689	0.98
13	18	1.7e-05	0.0064	18.7	9.1	1	23	695	717	695	717	0.98
14	18	2.2e-05	0.0083	18.3	7.5	1	23	723	745	723	745	0.98
15	18	0.00063	0.24	13.7	8.8	1	21	751	771	751	773	0.94
16	18	8.1e-06	0.003	19.7	0.4	1	23	779	801	779	801	0.98
17	18	0.019	7.3	9.1	4.5	1	23	811	833	811	833	0.98
18	18	3.1e-07	0.00012	24.1	1.3	1	23	839	861	839	861	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAGCAGCATGCTCTGCCAGCGACAACGCAGGCACAACAAGAGGAAGTAAGTGTGGGTCAGAGCGGTCGCCCTTTGTATCCAGGTGGTTTGGCAACTCCAACAAGTCTTGGCAATGTAGGAAACAATTCTCACTCATCCACAGACCTACGCGTAGGTACAGCTGTAGCATTAGCATCCTCAGTAGCAAAATATTGGGTCCTCACCAATCTTTTTCCTGGGCCGATACCACAGGTATCAGTGTATCACCATCCTCATCATCGAGGTAGTGCAGGAAGTGGCGAAACTCAAACAACCAAAGATTCAACAGTACTGCTAAATCAAGATATGTCGTTAACATCTAGTTCGCATCAAACACCAAATTCACATCACCATCAATCATCAGTCAGTAGAAGTACCCAACATAATTCCCTGCAGTCCACTGCACAGATACCAGTCTCTTTGCCAGGACTCAATCTCGATGGGAATCGTTGCAGCGATAATCAAATTCATTCGCATGTTCAACGCGATCATCAGCATCAACAAGCACAAGATTTACAGCAAACCCTAATGCATCAGCAACAACAACAAATCGGTGTTACTATTGGCAGTGCTACTGCTACAGATAGTACCTCTTCTAGTGTAGTGGACAAAGTTGAGAAAAAAGAAGATCTACGACAATTAAATATGACCCAGTTTCAAGTACCAGATTTAAAGTCAGGAGGTCACATGATGGATGTTCGAACTGCAGATGGATCTATTGTTAAAATTAGTACTGCAAACGATCAAGATCTTGCAAAAACTTTGGGAGTTGATATATCTCAGTATATAAACAAGGGAGCCGTGAATGTTGAAGAATTGAATCAGATAAACCAGCTACTGGCATATCACGAAGTATTTGGAAAGTTGCAAAGTGAAATTGCCGCAGGTACTACATTAATTGGAGGTACAGTACCAACACAAACAGTTACAACAATCCAGAACGGTACCCCTATAGTTCAACAAGTACAGCTAAATAAATTTGATATTAAAACAAACGATGGTGAAGCAACACCAGGTCCAAGTGGATCACCTGTATCAGTAGGAAGTCATGCCTGTGAGGTTTGTGGCAAGATCTTCCAATTTCGCTATCAACTGATCGTCCATCGAAGATACCATACAGAAAGAAAACCTTTTACTTGTCAGGTATGTGGAAAGGCATTTACCACTGCAAATGATTTAACTCGCCATGGAAAATGTCACTTAGGCGGTTCCATGTTTACATGTGCTGTTTGCTTTCATGTTTTCGCTAATGCACCGTCATTAGAGCGACACATGAAACGTCACGCTACCGACAAACCTTACAATTGTACTGTTTGTGGTAAAAGCTTTGCAAGAAAAGAGCACTTGGATAATCATACCAGGTGTCACACAGGAGAAACACCATACAGATGTCAATATTGCGCAAAAACTTTCACTCGTAAAGAGCACATGGTGAATCATGTGCGCAAGCACACGGGAGAAACGCCTCACCGATGCGACATTTGCAAGAAATCATTTACTCGCAAGGAGCATTTCATGAACCACGTAATGTGGCACACAGGTGAAACACCTCACCATTGTCAAGTCTGCGGCAAGAAATATACACGGAAAGAGCATTTAGCAAATCACATGCGGTCTCATACCAACGATACACCTTTCCGCTGTGAGATTTGCGGCAAGTCATTCACCCGTAAAGAACACTTCACGAATCATATAATGTGGCATACTGGCGAGACTCCGCACCGCTGCGATTTCTGCTCAAAGACGTTCACTCGTAAGGAGCACCTGCTGAATCACGTCAGACAGCACACGGGTGAGTCACCACATCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGAGAGACGCCCTTCCGCTGCCAGTACTGTCCGAAAGCGTTTACGCGGAAGGATCACCTGGTGAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACGAAATCCTTCACGCGGAAGGAACATTTGACAAATCACGTGCGTCAACACACAGGCGAGTCGCCCCATCGCTGCCATTTCTGCTCCAAATCGTTTACGCGCAAGGAGCATTTGACGAATCACGTGCGCATCCACACTGGTGAGTCGCCCCATCGGTGCGAATTTTGCCAGCGCACCTTTACACGCAAGGAACATCTTAATAACCACCTCAGGCAGCACACCGGTGACTCGTCACACTGCTGCAACGTTTGCTCCAAGCCCTTCACTCGAAAGGAGCACCTGATTAATCATATGCGCTGTCATACGGGCGAGAGACCATTTGTTTGCACCGAGTGCGGCAAGAGCTTCCCCTTGAAGGGTAATCTGCTTTTCCATATGCGCTCACACAACAAGGGTAGCCAAGCTGAACGACCTTTCCGCTGTGACCTTTGCCCCAAGGACTTTATGTGCAAAGGACATCTTGTTTCCCATAGACGCTCGCATTCAGATGAGCGACCTCATAGCTGCCCTGACTGTGGTAAGACTTTCGTTGAGAAGGGTAACATGCTACGGCATCTGCGCAAGCATGCAGCCGAAGGTCCCCCCACGCAAGTTGGTAGTGCGGCTTCGGCTCTAACCGGAGTTCAACAAGGTCTGCCCCTACCCTCGGCCGCAGCGGCCGCAGCAGCGGTTCTTGTCGGCCATCCTCTGGCACCACCGCCAACTCCAGCTGTAGGTTTGCCGCAACACACAGTGGTTGTGCCCACACCTCCAGGAGTCCTTACTTCTTACTAA
Protein Sequence: MNSEQHALPATTQAQQEEVSVGQSGRPLYPGGLATPTSLGNVGNNSHSSTDLRVGTAVALASSVAKYWVLTNLFPGPIPQVSVYHHPHHRGSAGSGETQTTKDSTVLLNQDMSLTSSSHQTPNSHHHQSSVSRSTQHNSLQSTAQIPVSLPGLNLDGNRCSDNQIHSHVQRDHQHQQAQDLQQTLMHQQQQQIGVTIGSATATDSTSSSVVDKVEKKEDLRQLNMTQFQVPDLKSGGHMMDVRTADGSIVKISTANDQDLAKTLGVDISQYINKGAVNVEELNQINQLLAYHEVFGKLQSEIAAGTTLIGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKTNDGEATPGPSGSPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTTANDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLINHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSQAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVGSAASALTGVQQGLPLPSAAAAAAAVLVGHPLAPPPTPAVGLPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00286639;
90% Identity: iTF_00464122;
80% Identity: -