Djun021707.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dione juno
Gene Symbol
-
Assembly
GCA_037127375.1
Location
JAXRJS010000092.1:2078800-2082336[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 1.9e-06 0.00017 22.5 5.8 1 23 257 279 257 279 0.98
2 11 0.071 6.4 8.1 3.3 2 23 375 397 373 397 0.89
3 11 0.00013 0.012 16.7 1.2 1 23 401 423 401 423 0.98
4 11 0.00024 0.021 15.9 0.6 2 23 445 467 444 467 0.93
5 11 0.29 26 6.2 1.0 1 23 471 494 471 494 0.92
6 11 0.02 1.8 9.8 0.8 2 23 517 539 516 539 0.91
7 11 1.5e-05 0.0013 19.7 3.0 1 23 549 571 549 572 0.96
8 11 0.0024 0.22 12.7 1.5 3 23 589 609 588 609 0.98
9 11 0.0084 0.76 11.0 0.4 1 23 615 637 615 637 0.94
10 11 0.7 63 5.0 2.9 1 21 643 663 643 667 0.90
11 11 0.018 1.6 9.9 0.1 3 23 715 735 713 735 0.97

Sequence Information

Coding Sequence
ATGTCATCACACACTACTGACTActctaataacaaattaacgGGTTTGAAtgacaatatacaaataaaagaagaagaatCTAATGagttaatattagatataaaaccAGAAAAAGATGATATAAGTGATGATAAtccatttgaaaatattcaagtaGAAGTAAAACATGAATATATAACACCAAGCTGTGAAGATGATAAGCTTATGTCTGTACCTGTTAATGAGgctgaaaattatataggaaCTGAAAATGATAGAATAGATACagataatagtattaaattggAAGCGCCATATGAGTATCCGAGTATTGATGATGGAAGTATGGATAGTGAAGAGGCTTCAGCATTGAATAATGTAGAAGCATGTTTACAAGATGAAATTGATGttaaacatgaaatatttgagGAACATTCTAAAGAAgacattgataaaataattaaagaagaaATGGATATAACGGTAACGGAGActcatttaatatcaaataaggTGATCAACACCACGTCAACTATAACCAACCCGCAAGATGGGTTAGTACAGTCACAAACTACTAAAACCTTAGTCATGGAAATACATCCTATGGCCGGAATAAGTAACTTAGATAAAATGGGTAACCCCGAAGAAATTTTACCAACTATGAACGAATATGAGCATATAGTGGAATATGATAGTTCTTTCcaattaaattctataacGGGCAATGTTTTATCCCTTGAACAAGAAGCATACGGTCTACTTAAAGCGGGGCATTGTACAGACAAAAGATATAATTGTCATAAGTGTGAAAAATCGTTCAAAAAATCAAGCTACTTAAAGTCCCACATGAAAGTTCACGTGTCCATAGAAAATCGTGCGATGGGTTTAATAAAAGGTTTAAAGACGAGAATGGCGAATATGAAGAAGAAGACATGCAAAGATATCGATGAAGATTTTAAAAGTGAAAGTGATACTATGATGAAAACTAATTCTCGACTCGAAAGATTGGAGAATAGGACGCGTGTAAAGGAAGAAGTGAAGAAAGAAGGATACGAGTGCACTTGCGGAGAAGTTTACAAACGGAAAATAAGAATGATAAGCTGTTTGAGATCGCACGATGAATATAAAGACGATTCTTGCTTTTCTTGCATTTCTTGCACGAAACAGTTCAAAGATAAGCAAGAGTTAGCATTGCATAGAAAAAGACTTCATAGAAAACGGTTTCCTTGTAAATTTTGTCCAACAGATTATAGTACTCGAAAAGAATTATTCAAGCATTTACAAATACACCAAAAGGTCCAGTTAATGGAGTATAAAGTTATATCAGAGGTTGTTAAAGGGAAGCAGgagttaaaatgttttatgtgtTCAAAAAGTTTCTCCGAATTGTCCGAACTAAAATCGCATGTCATGGACGATCACAAGGCACCTTACATATGTCCGCATTGCAACGGCAAGTTTGTGAAGATCATAGACTTTGGGAATCATACGAAGTTGTACCATCCTGAAGTGGAAGGACAATCTGTTTTGGATGTTCTTGAAGCGTTTTCCAAATTGGTTCAAGCTTGGAAATGCGAGGAATGCCATTTACAGTTTAACGAAGCTGACAAGTTTGCGAAGCATCAGGTTGAGTATCACAGTCCGGATTTAAAGGCAAAAGAGCAATTTCAGTGTACAGATTGTAGGAGAGTTTTCGTCAGCCAGAAAGGGCTGACCTCCCACAAACGGATACATCACAATACCGATAGTATAGAAGAAGCTGAGCTAGAAGAACAAGGAGTTCTGTGTGTGGAATGTCGGAAAATATGCAAAGATGAGACCGCTTTAACGTCGCACATGAGACTACATTCAATGGATAGAAAGTATCCGTGCAAGTTTTGCGACTTTCGATTCGCGACGCCGGAAAAAAGGAAAGCTCACGCTGAATTGCACACTGGTGATATGAAAtacgtatgttttatatgtgaatATCAGTGCAGTTCTGAGAACAGGCTGAGACAGCACAAGACCTCggttaaacatttaaacatgAAAGAGTACTTACTTACGGGAAAGCCCCTCATCGAAGAACAGTCGACATCCAAGAGAAATAGGAAGAGTGATGAGAAAGAGAAGAAAAGGAAGCACAGCAGCTCATCATCGAGTGAAGAAAACGAATCTATTTGTGATGTGTGTGGTGATAAGTTTCCGAGTGAGGAGGACATGTTGAAACATAAACAGACACACCCCTTTATTGAATTTCCTAACGAGGACACGCCTACTAGAATATTCTTCAAATGA
Protein Sequence
MSSHTTDYSNNKLTGLNDNIQIKEEESNELILDIKPEKDDISDDNPFENIQVEVKHEYITPSCEDDKLMSVPVNEAENYIGTENDRIDTDNSIKLEAPYEYPSIDDGSMDSEEASALNNVEACLQDEIDVKHEIFEEHSKEDIDKIIKEEMDITVTETHLISNKVINTTSTITNPQDGLVQSQTTKTLVMEIHPMAGISNLDKMGNPEEILPTMNEYEHIVEYDSSFQLNSITGNVLSLEQEAYGLLKAGHCTDKRYNCHKCEKSFKKSSYLKSHMKVHVSIENRAMGLIKGLKTRMANMKKKTCKDIDEDFKSESDTMMKTNSRLERLENRTRVKEEVKKEGYECTCGEVYKRKIRMISCLRSHDEYKDDSCFSCISCTKQFKDKQELALHRKRLHRKRFPCKFCPTDYSTRKELFKHLQIHQKVQLMEYKVISEVVKGKQELKCFMCSKSFSELSELKSHVMDDHKAPYICPHCNGKFVKIIDFGNHTKLYHPEVEGQSVLDVLEAFSKLVQAWKCEECHLQFNEADKFAKHQVEYHSPDLKAKEQFQCTDCRRVFVSQKGLTSHKRIHHNTDSIEEAELEEQGVLCVECRKICKDETALTSHMRLHSMDRKYPCKFCDFRFATPEKRKAHAELHTGDMKYVCFICEYQCSSENRLRQHKTSVKHLNMKEYLLTGKPLIEEQSTSKRNRKSDEKEKKRKHSSSSSSEENESICDVCGDKFPSEEDMLKHKQTHPFIEFPNEDTPTRIFFK